RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 APPBP2Q92624 585 aa11.58□□□□□ -0.56
CLIP1-204ENST00000501271 SLC4A9Q96Q91 983 aa11.58□□□□□ -0.56
CLIP1-204ENST00000501271 KIF3AQ9Y496 699 aa11.58□□□□□ -0.56
CLIP1-204ENST00000501271 RIPOR2Q9Y4F9 1068 aa11.58□□□□□ -0.56
CLIP1-204ENST00000501271 ABCC12Q96J65 1359 aa11.57□□□□□ -0.56
CLIP1-204ENST00000501271 NPM3O75607 178 aaKnown RBP11.57□□□□□ -0.56
CLIP1-204ENST00000501271 STARD3NLO95772 234 aa11.57□□□□□ -0.56
CLIP1-204ENST00000501271 ITGA6P23229 1130 aa11.57□□□□□ -0.56
CLIP1-204ENST00000501271 IMMTQ16891 758 aaKnown RBP11.57□□□□□ -0.56
CLIP1-204ENST00000501271 METTL24Q5JXM2 366 aa11.57□□□□□ -0.56
CLIP1-204ENST00000501271 NLRP10Q86W26 655 aa11.57□□□□□ -0.56
CLIP1-204ENST00000501271 TTLL11Q8NHH1 800 aa11.57□□□□□ -0.56
CLIP1-204ENST00000501271 GOLPH3LQ9H4A5 285 aa11.57□□□□□ -0.56
CLIP1-204ENST00000501271 CTNNA3Q9UI47 895 aa11.57□□□□□ -0.56
CLIP1-204ENST00000501271 RCOR1Q9UKL0 485 aa11.57□□□□□ -0.56
CLIP1-204ENST00000501271 C4AP0C0L4 1744 aa11.57□□□□□ -0.56
CLIP1-204ENST00000501271 C4BP0C0L5 1744 aa11.57□□□□□ -0.56
CLIP1-204ENST00000501271 GPAA1O43292 621 aa11.57□□□□□ -0.56
CLIP1-204ENST00000501271 MB21D2Q8IYB1 491 aaPredicted RBP11.57□□□□□ -0.56
CLIP1-204ENST00000501271 DNAJC25Q9H1X3 360 aa11.57□□□□□ -0.56
CLIP1-204ENST00000501271 BTG4Q9NY30 223 aa11.57□□□□□ -0.56
CLIP1-204ENST00000501271 PRC1O43663 620 aa11.56□□□□□ -0.56
CLIP1-204ENST00000501271 CTSWP56202 376 aa11.56□□□□□ -0.56
CLIP1-204ENST00000501271 ANTXR2P58335 489 aa11.56□□□□□ -0.56
CLIP1-204ENST00000501271 LDHAL6AQ6ZMR3 332 aa11.56□□□□□ -0.56
CLIP1-204ENST00000501271 CCAR1Q8IX12 1150 aaKnown RBP11.56□□□□□ -0.56
CLIP1-204ENST00000501271 SPTLC3Q9NUV7 552 aa11.56□□□□□ -0.56
CLIP1-204ENST00000501271 PYCARDQ9ULZ3 195 aa11.56□□□□□ -0.56
CLIP1-204ENST00000501271 DISP2A7MBM2 1401 aa11.56□□□□□ -0.56
CLIP1-204ENST00000501271 BCL9O00512 1426 aa11.56□□□□□ -0.56
CLIP1-204ENST00000501271 DNTTIP2Q5QJE6 756 aaKnown RBP11.56□□□□□ -0.56
CLIP1-204ENST00000501271 VGLL2Q8N8G2 317 aa11.56□□□□□ -0.56
CLIP1-204ENST00000501271 TDRD7Q8NHU6 1098 aaKnown RBP11.56□□□□□ -0.56
CLIP1-204ENST00000501271 HPS5Q9UPZ3 1129 aa11.56□□□□□ -0.56
CLIP1-204ENST00000501271 ZBTB1Q9Y2K1 713 aa11.56□□□□□ -0.56
CLIP1-204ENST00000501271 CYP19A1P11511 503 aaPredicted RBP11.55□□□□□ -0.56
CLIP1-204ENST00000501271 ZNF165P49910 485 aa11.55□□□□□ -0.56
CLIP1-204ENST00000501271 RBM10P98175 930 aaKnown RBP11.55□□□□□ -0.56
CLIP1-204ENST00000501271 SNW1Q13573 536 aaKnown RBP11.55□□□□□ -0.56
CLIP1-204ENST00000501271 RAB11FIP4Q86YS3 637 aa11.55□□□□□ -0.56
CLIP1-204ENST00000501271 ARAP2Q8WZ64 1704 aa11.55□□□□□ -0.56
CLIP1-204ENST00000501271 SLIT2O94813 1529 aa11.55□□□□□ -0.56
CLIP1-204ENST00000501271 LRP5O75197 1615 aa11.55□□□□□ -0.56
CLIP1-204ENST00000501271 PLCH1Q4KWH8 1693 aa11.55□□□□□ -0.56
CLIP1-204ENST00000501271 KLF18A0A0U1RQI7 1052 aa11.55□□□□□ -0.56
CLIP1-204ENST00000501271 ANKRD18BA2A2Z9 1011 aa11.55□□□□□ -0.56
CLIP1-204ENST00000501271 GOLGA8BA8MQT2 603 aa11.55□□□□□ -0.56
CLIP1-204ENST00000501271 IRS4O14654 1257 aaPredicted RBP11.55□□□□□ -0.56
CLIP1-204ENST00000501271 OTUD7BQ6GQQ9 843 aa11.55□□□□□ -0.56
CLIP1-204ENST00000501271 KIAA1524Q8TCG1 905 aa11.55□□□□□ -0.56
CLIP1-204ENST00000501271 ZNF396Q96N95 335 aaPredicted RBP11.55□□□□□ -0.56
CLIP1-204ENST00000501271 NBPF3Q9H094 633 aa11.55□□□□□ -0.56
CLIP1-204ENST00000501271 CNNM1Q9NRU3 951 aa11.55□□□□□ -0.56
CLIP1-204ENST00000501271 DENND2AQ9ULE3 1009 aa11.55□□□□□ -0.56
CLIP1-204ENST00000501271 ATRNO75882 1429 aa11.54□□□□□ -0.56
CLIP1-204ENST00000501271 ECM29Q5VYK3 1845 aa11.54□□□□□ -0.56
CLIP1-204ENST00000501271 WNK3Q9BYP7 1800 aa11.54□□□□□ -0.56
CLIP1-204ENST00000501271 GOLGA6L6A8MZA4 724 aa11.54□□□□□ -0.56
CLIP1-204ENST00000501271 PTGS1P23219 599 aa11.54□□□□□ -0.56
CLIP1-204ENST00000501271 ADD2P35612 726 aa11.54□□□□□ -0.56
CLIP1-204ENST00000501271 ATL3Q6DD88 541 aa11.54□□□□□ -0.56
CLIP1-204ENST00000501271 C11orf57Q6ZUT1 292 aaPredicted RBP11.54□□□□□ -0.56
CLIP1-204ENST00000501271 PLA2G4DQ86XP0 818 aa11.54□□□□□ -0.56
CLIP1-204ENST00000501271 NCOA7Q8NI08 942 aa11.54□□□□□ -0.56
CLIP1-204ENST00000501271 NKX2-3Q8TAU0 364 aa11.54□□□□□ -0.56
CLIP1-204ENST00000501271 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.54□□□□□ -0.56
CLIP1-204ENST00000501271 ZNF213O14771 459 aa11.54□□□□□ -0.56
CLIP1-204ENST00000501271 TPM3P06753 285 aa11.54□□□□□ -0.56
CLIP1-204ENST00000501271 ZNF75DP51815 510 aa11.54□□□□□ -0.56
CLIP1-204ENST00000501271 ENGASEQ8NFI3 743 aa11.54□□□□□ -0.56
CLIP1-204ENST00000501271 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.54□□□□□ -0.56
CLIP1-204ENST00000501271 PIH1D3Q9NQM4 214 aaKnown RBP11.54□□□□□ -0.56
CLIP1-204ENST00000501271 TRMT112Q9UI30 125 aaKnown RBP11.54□□□□□ -0.56
CLIP1-204ENST00000501271 UBN2Q6ZU65 1347 aa11.54□□□□□ -0.56
CLIP1-204ENST00000501271 DOT1LQ8TEK3 1739 aa11.53□□□□□ -0.56
CLIP1-204ENST00000501271 COL14A1Q05707 1796 aaKnown RBP11.53□□□□□ -0.56
CLIP1-204ENST00000501271 ME1P48163 572 aa11.53□□□□□ -0.56
CLIP1-204ENST00000501271 CHD4Q14839 1912 aa11.53□□□□□ -0.56
CLIP1-204ENST00000501271 SLC9C2Q5TAH2 1124 aa11.53□□□□□ -0.56
CLIP1-204ENST00000501271 CCDC73Q6ZRK6 1079 aa11.53□□□□□ -0.56
CLIP1-204ENST00000501271 RALYLQ86SE5 291 aaKnown RBP11.53□□□□□ -0.56
CLIP1-204ENST00000501271 TRIM5Q9C035 493 aa11.53□□□□□ -0.56
CLIP1-204ENST00000501271 GJB4Q9NTQ9 266 aa11.53□□□□□ -0.56
CLIP1-204ENST00000501271 A0A087WWV3 80 aa11.52□□□□□ -0.56
CLIP1-204ENST00000501271 DYNC1I1O14576 645 aa11.52□□□□□ -0.56
CLIP1-204ENST00000501271 PDE8BO95263 885 aa11.52□□□□□ -0.56
CLIP1-204ENST00000501271 PHKA1P46020 1223 aa11.52□□□□□ -0.56
CLIP1-204ENST00000501271 FAM160A1Q05DH4 1040 aa11.52□□□□□ -0.56
CLIP1-204ENST00000501271 IQCB1Q15051 598 aa11.52□□□□□ -0.56
CLIP1-204ENST00000501271 TBC1D10CQ8IV04 446 aa11.52□□□□□ -0.56
CLIP1-204ENST00000501271 FSIP1Q8NA03 581 aa11.52□□□□□ -0.56
CLIP1-204ENST00000501271 CHMP4CQ96CF2 233 aa11.52□□□□□ -0.56
CLIP1-204ENST00000501271 ZNF512BQ96KM6 892 aaPredicted RBP11.52□□□□□ -0.56
CLIP1-204ENST00000501271 NRBP1Q9UHY1 535 aa11.52□□□□□ -0.56
CLIP1-204ENST00000501271 PCDHA7Q9UN72 937 aa11.52□□□□□ -0.56
CLIP1-204ENST00000501271 DOCK2Q92608 1830 aa11.52□□□□□ -0.56
CLIP1-204ENST00000501271 CTAGE5O15320 804 aa11.52□□□□□ -0.57
CLIP1-204ENST00000501271 MAPK8IP2Q13387 824 aaPredicted RBP11.52□□□□□ -0.57
CLIP1-204ENST00000501271 CCDC102BQ68D86 513 aa11.52□□□□□ -0.57
CLIP1-204ENST00000501271 CCDC186Q7Z3E2 898 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms