RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 COL4A5P29400 1685 aa6.06□□□□□ -1.44
UBR4-215ENST00000492606 FAM208BQ5VWN6 2430 aa6.06□□□□□ -1.44
UBR4-215ENST00000492606 POLR2AP24928 1970 aaKnown RBP6.06□□□□□ -1.44
UBR4-215ENST00000492606 COL2A1P02458 1487 aaPredicted RBP6.05□□□□□ -1.44
UBR4-215ENST00000492606 CYSRT1A8MQ03 144 aa6.05□□□□□ -1.44
UBR4-215ENST00000492606 C6orf229H3BNL8 230 aa6.05□□□□□ -1.44
UBR4-215ENST00000492606 FOSL2P15408 326 aa6.05□□□□□ -1.44
UBR4-215ENST00000492606 HIRAP54198 1017 aaPredicted RBP6.05□□□□□ -1.44
UBR4-215ENST00000492606 ZNF697Q5TEC3 545 aa6.05□□□□□ -1.44
UBR4-215ENST00000492606 BLOC1S3Q6QNY0 202 aa6.05□□□□□ -1.44
UBR4-215ENST00000492606 RNF19BQ6ZMZ0 732 aa6.05□□□□□ -1.44
UBR4-215ENST00000492606 PRR7Q8TB68 274 aa6.05□□□□□ -1.44
UBR4-215ENST00000492606 GLMNQ92990 594 aa6.05□□□□□ -1.44
UBR4-215ENST00000492606 THAP11Q96EK4 314 aa6.05□□□□□ -1.44
UBR4-215ENST00000492606 CFHR5Q9BXR6 569 aa6.05□□□□□ -1.44
UBR4-215ENST00000492606 NDUFB9Q9Y6M9 179 aa6.05□□□□□ -1.44
UBR4-215ENST00000492606 ZNF609O15014 1411 aa6.05□□□□□ -1.44
UBR4-215ENST00000492606 ANKRD26Q9UPS8 1709 aa6.05□□□□□ -1.44
UBR4-215ENST00000492606 MRC1P22897 1456 aa6.04□□□□□ -1.44
UBR4-215ENST00000492606 RPS6KA4O75676 772 aa6.04□□□□□ -1.44
UBR4-215ENST00000492606 TM4SF4P48230 202 aa6.04□□□□□ -1.44
UBR4-215ENST00000492606 NR6A1Q15406 480 aa6.04□□□□□ -1.44
UBR4-215ENST00000492606 GRIPAP1Q4V328 841 aa6.04□□□□□ -1.44
UBR4-215ENST00000492606 BRICD5Q6PL45 260 aa6.04□□□□□ -1.44
UBR4-215ENST00000492606 CDC37L1Q7L3B6 337 aa6.04□□□□□ -1.44
UBR4-215ENST00000492606 RETREG3Q86VR2 466 aa6.04□□□□□ -1.44
UBR4-215ENST00000492606 LURAP1LQ8IV03 231 aa6.04□□□□□ -1.44
UBR4-215ENST00000492606 MRPL50Q8N5N7 158 aaKnown RBP6.04□□□□□ -1.44
UBR4-215ENST00000492606 C2orf69Q8N8R5 385 aa6.04□□□□□ -1.44
UBR4-215ENST00000492606 CD99L2Q8TCZ2 262 aa6.04□□□□□ -1.44
UBR4-215ENST00000492606 ATXN2LQ8WWM7 1075 aaKnown RBP6.04□□□□□ -1.44
UBR4-215ENST00000492606 PIGBQ92521 554 aa6.04□□□□□ -1.44
UBR4-215ENST00000492606 NECTIN2Q92692 538 aa6.04□□□□□ -1.44
UBR4-215ENST00000492606 ZMYND8Q9ULU4 1186 aaPredicted RBP6.04□□□□□ -1.44
UBR4-215ENST00000492606 KDM3BQ7LBC6 1761 aa6.03□□□□□ -1.44
UBR4-215ENST00000492606 USP42Q9H9J4 1324 aaKnown RBP6.03□□□□□ -1.44
UBR4-215ENST00000492606 SOWAHBA6NEL2 793 aa6.03□□□□□ -1.44
UBR4-215ENST00000492606 MAGEA10P43363 369 aaPredicted RBP6.03□□□□□ -1.44
UBR4-215ENST00000492606 SLC9C1Q4G0N8 1177 aa6.03□□□□□ -1.44
UBR4-215ENST00000492606 CFAP70Q5T0N1 1121 aa6.03□□□□□ -1.44
UBR4-215ENST00000492606 DESI1Q6ICB0 168 aa6.03□□□□□ -1.44
UBR4-215ENST00000492606 SLC4A9Q96Q91 983 aa6.03□□□□□ -1.44
UBR4-215ENST00000492606 TTYH1Q9H313 450 aaPredicted RBP6.03□□□□□ -1.44
UBR4-215ENST00000492606 ALG2Q9H553 416 aa6.03□□□□□ -1.44
UBR4-215ENST00000492606 C14orf93Q9H972 538 aaKnown RBP6.03□□□□□ -1.44
UBR4-215ENST00000492606 ADARB2Q9NS39 739 aaKnown RBP6.03□□□□□ -1.44
UBR4-215ENST00000492606 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.03□□□□□ -1.44
UBR4-215ENST00000492606 PTCH2Q9Y6C5 1203 aa6.03□□□□□ -1.44
UBR4-215ENST00000492606 ADGRB1O14514 1584 aa6.02□□□□□ -1.45
UBR4-215ENST00000492606 MED19A0JLT2 244 aaPredicted RBP6.02□□□□□ -1.45
UBR4-215ENST00000492606 RNF40O75150 1001 aa6.02□□□□□ -1.45
UBR4-215ENST00000492606 VAC14Q08AM6 782 aa6.02□□□□□ -1.45
UBR4-215ENST00000492606 MTFR1Q15390 333 aa6.02□□□□□ -1.45
UBR4-215ENST00000492606 KMT5BQ4FZB7 885 aa6.02□□□□□ -1.45
UBR4-215ENST00000492606 HDGFL1Q5TGJ6 251 aa6.02□□□□□ -1.45
UBR4-215ENST00000492606 OLFM4Q6UX06 510 aa6.02□□□□□ -1.45
UBR4-215ENST00000492606 LYPD8Q6UX82 237 aa6.02□□□□□ -1.45
UBR4-215ENST00000492606 HELBQ8NG08 1087 aaPredicted RBP6.02□□□□□ -1.45
UBR4-215ENST00000492606 SH3TC2Q8TF17 1288 aa6.02□□□□□ -1.45
UBR4-215ENST00000492606 C7orf43Q8WVR3 580 aa6.02□□□□□ -1.45
UBR4-215ENST00000492606 CCDC97Q96F63 343 aaPredicted RBP6.02□□□□□ -1.45
UBR4-215ENST00000492606 EFCC1Q9HA90 598 aa6.02□□□□□ -1.45
UBR4-215ENST00000492606 SALL2Q9Y467 1007 aaPredicted RBP6.02□□□□□ -1.45
UBR4-215ENST00000492606 COL5A3P25940 1745 aaPredicted RBP6.02□□□□□ -1.45
UBR4-215ENST00000492606 FAM208AQ9UK61 1670 aaKnown RBP6.01□□□□□ -1.45
UBR4-215ENST00000492606 ARFGEF2Q9Y6D5 1785 aa6.01□□□□□ -1.45
UBR4-215ENST00000492606 XIRP2A4UGR9 3374 aa6.01□□□□□ -1.45
UBR4-215ENST00000492606 ZIC2O95409 532 aaPredicted RBP6.01□□□□□ -1.45
UBR4-215ENST00000492606 FKBP4Q02790 459 aaKnown RBP eCLIP6.01□□□□□ -1.45
UBR4-215ENST00000492606 NFIXQ14938 502 aa6.01□□□□□ -1.45
UBR4-215ENST00000492606 RC3H1Q5TC82 1133 aaKnown RBP6.01□□□□□ -1.45
UBR4-215ENST00000492606 PRPF40BQ6NWY9 871 aaKnown RBP6.01□□□□□ -1.45
UBR4-215ENST00000492606 NBPF11Q86T75 865 aa6.01□□□□□ -1.45
UBR4-215ENST00000492606 SCUBE3Q8IX30 993 aa6.01□□□□□ -1.45
UBR4-215ENST00000492606 CALR3Q96L12 384 aaKnown RBP6.01□□□□□ -1.45
UBR4-215ENST00000492606 UCN2Q96RP3 112 aa6.01□□□□□ -1.45
UBR4-215ENST00000492606 CDK19Q9BWU1 502 aa6.01□□□□□ -1.45
UBR4-215ENST00000492606 KRTAP3-3Q9BYR6 98 aa6.01□□□□□ -1.45
UBR4-215ENST00000492606 KRTAP3-2Q9BYR7 98 aa6.01□□□□□ -1.45
UBR4-215ENST00000492606 UBE2OQ9C0C9 1292 aaKnown RBP6.01□□□□□ -1.45
UBR4-215ENST00000492606 GPRC5DQ9NZD1 345 aa6.01□□□□□ -1.45
UBR4-215ENST00000492606 ASAP1Q9ULH1 1129 aa6.01□□□□□ -1.45
UBR4-215ENST00000492606 ZNF646O15015 1829 aaPredicted RBP6□□□□□ -1.45
UBR4-215ENST00000492606 F12P00748 615 aaPredicted RBP6□□□□□ -1.45
UBR4-215ENST00000492606 SERPINB2P05120 415 aa6□□□□□ -1.45
UBR4-215ENST00000492606 SYN1P17600 705 aa6□□□□□ -1.45
UBR4-215ENST00000492606 IARSP41252 1262 aaKnown RBP6□□□□□ -1.45
UBR4-215ENST00000492606 MRPS5P82675 430 aaKnown RBP6□□□□□ -1.45
UBR4-215ENST00000492606 KANK4Q5T7N3 995 aaPredicted RBP6□□□□□ -1.45
UBR4-215ENST00000492606 KCNH5Q8NCM2 988 aa6□□□□□ -1.45
UBR4-215ENST00000492606 TSC1Q92574 1164 aa6□□□□□ -1.45
UBR4-215ENST00000492606 PRM3Q9NNZ6 103 aa6□□□□□ -1.45
UBR4-215ENST00000492606 TRAK1Q9UPV9 953 aa6□□□□□ -1.45
UBR4-215ENST00000492606 ZFYVE26Q68DK2 2539 aa6□□□□□ -1.45
UBR4-215ENST00000492606 RGPD2P0DJD1 1756 aa6□□□□□ -1.45
UBR4-215ENST00000492606 DNAH14Q0VDD8 3507 aa6□□□□□ -1.45
UBR4-215ENST00000492606 REV3LO60673 3130 aa5.99□□□□□ -1.45
UBR4-215ENST00000492606 RIF1Q5UIP0 2472 aaKnown RBP5.99□□□□□ -1.45
UBR4-215ENST00000492606 BMP1P13497 986 aa5.99□□□□□ -1.45
UBR4-215ENST00000492606 SLC4A3P48751 1232 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms