RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 PHKBQ93100 1093 aa14.68□□□□□ -0.06
SHOX2-205ENST00000490689 IVLP07476 585 aa14.68□□□□□ -0.06
SHOX2-205ENST00000490689 CCT6AP40227 531 aaKnown RBP14.68□□□□□ -0.06
SHOX2-205ENST00000490689 IRX3P78415 501 aaPredicted RBP14.68□□□□□ -0.06
SHOX2-205ENST00000490689 NAA16Q6N069 864 aaPredicted RBP14.68□□□□□ -0.06
SHOX2-205ENST00000490689 CLIC4Q9Y696 253 aa14.68□□□□□ -0.06
SHOX2-205ENST00000490689 POTEB2H3BUK9 544 aa14.68□□□□□ -0.06
SHOX2-205ENST00000490689 CDR1P51861 262 aa14.68□□□□□ -0.06
SHOX2-205ENST00000490689 EIF4A1P60842 406 aaKnown RBP14.68□□□□□ -0.06
SHOX2-205ENST00000490689 TAF5LO75529 589 aa14.67□□□□□ -0.06
SHOX2-205ENST00000490689 YEATS4O95619 227 aa14.67□□□□□ -0.06
SHOX2-205ENST00000490689 ATP1A3P13637 1013 aa14.67□□□□□ -0.06
SHOX2-205ENST00000490689 GPTP24298 496 aa14.67□□□□□ -0.06
SHOX2-205ENST00000490689 STIM1Q13586 685 aa14.67□□□□□ -0.06
SHOX2-205ENST00000490689 PROSER3Q2NL68 480 aa14.67□□□□□ -0.06
SHOX2-205ENST00000490689 NFATC2IPQ8NCF5 419 aa14.67□□□□□ -0.06
SHOX2-205ENST00000490689 HINFPQ9BQA5 517 aa14.67□□□□□ -0.06
SHOX2-205ENST00000490689 MYL10Q9BUA6 226 aa14.67□□□□□ -0.06
SHOX2-205ENST00000490689 FANCLQ9NW38 375 aa14.67□□□□□ -0.06
SHOX2-205ENST00000490689 CEP131Q9UPN4 1083 aa14.67□□□□□ -0.06
SHOX2-205ENST00000490689 CYP21A2P08686 494 aa14.67□□□□□ -0.06
SHOX2-205ENST00000490689 TTC31Q49AM3 519 aaPredicted RBP14.67□□□□□ -0.06
SHOX2-205ENST00000490689 ARHGAP6O43182 974 aa14.67□□□□□ -0.06
SHOX2-205ENST00000490689 PNMA6AP0CW24 399 aaPredicted RBP14.67□□□□□ -0.06
SHOX2-205ENST00000490689 PFKFB1P16118 471 aa14.67□□□□□ -0.06
SHOX2-205ENST00000490689 ADALQ6DHV7 355 aa14.67□□□□□ -0.06
SHOX2-205ENST00000490689 ANKRD7Q92527 254 aa14.67□□□□□ -0.06
SHOX2-205ENST00000490689 LLPHQ9BRT6 129 aaKnown RBP14.67□□□□□ -0.06
SHOX2-205ENST00000490689 LRP2BPQ9P2M1 347 aa14.67□□□□□ -0.06
SHOX2-205ENST00000490689 ANKRD65E5RJM6 399 aa14.66□□□□□ -0.06
SHOX2-205ENST00000490689 CEP112Q8N8E3 955 aa14.66□□□□□ -0.06
SHOX2-205ENST00000490689 ZNF594Q96JF6 807 aaPredicted RBP14.66□□□□□ -0.06
SHOX2-205ENST00000490689 KCNH3Q9ULD8 1083 aa14.66□□□□□ -0.06
SHOX2-205ENST00000490689 PREX2Q70Z35 1606 aa14.66□□□□□ -0.06
SHOX2-205ENST00000490689 HDXQ7Z353 690 aa14.66□□□□□ -0.06
SHOX2-205ENST00000490689 RNF113AO15541 343 aaKnown RBP14.66□□□□□ -0.06
SHOX2-205ENST00000490689 BRAPQ7Z569 592 aa14.66□□□□□ -0.06
SHOX2-205ENST00000490689 PLA2G4DQ86XP0 818 aa14.66□□□□□ -0.06
SHOX2-205ENST00000490689 GJB4Q9NTQ9 266 aa14.66□□□□□ -0.06
SHOX2-205ENST00000490689 POLR2DO15514 142 aaKnown RBP14.66□□□□□ -0.06
SHOX2-205ENST00000490689 IFIT5Q13325 482 aaKnown RBP14.66□□□□□ -0.06
SHOX2-205ENST00000490689 SLFNL1Q499Z3 407 aa14.66□□□□□ -0.06
SHOX2-205ENST00000490689 MYSM1Q5VVJ2 828 aa14.66□□□□□ -0.06
SHOX2-205ENST00000490689 RRAGBQ5VZM2 374 aa14.66□□□□□ -0.06
SHOX2-205ENST00000490689 KIF6Q6ZMV9 814 aa14.66□□□□□ -0.06
SHOX2-205ENST00000490689 IGSF22Q8N9C0 903 aa14.66□□□□□ -0.06
SHOX2-205ENST00000490689 KCNH5Q8NCM2 988 aa14.66□□□□□ -0.06
SHOX2-205ENST00000490689 MAPK8IP1Q9UQF2 711 aa14.66□□□□□ -0.06
SHOX2-205ENST00000490689 AKAP2Q9Y2D5 859 aa14.66□□□□□ -0.06
SHOX2-205ENST00000490689 E7EWF7 191 aa14.65□□□□□ -0.06
SHOX2-205ENST00000490689 AKAP4Q5JQC9 854 aa14.65□□□□□ -0.06
SHOX2-205ENST00000490689 SLC9C2Q5TAH2 1124 aa14.65□□□□□ -0.06
SHOX2-205ENST00000490689 ANKRD24Q8TF21 1146 aa14.65□□□□□ -0.06
SHOX2-205ENST00000490689 STAMQ92783 540 aa14.65□□□□□ -0.06
SHOX2-205ENST00000490689 CLIC6Q96NY7 704 aa14.65□□□□□ -0.06
SHOX2-205ENST00000490689 MPHOSPH8Q99549 860 aa14.65□□□□□ -0.06
SHOX2-205ENST00000490689 PPP2R2CQ9Y2T4 447 aa14.65□□□□□ -0.06
SHOX2-205ENST00000490689 GOLGA6L10A6NI86 522 aa14.65□□□□□ -0.06
SHOX2-205ENST00000490689 AKR1B15C9JRZ8 316 aaPredicted RBP14.65□□□□□ -0.06
SHOX2-205ENST00000490689 USP8P40818 1118 aa14.65□□□□□ -0.06
SHOX2-205ENST00000490689 SPA17Q15506 151 aa14.65□□□□□ -0.06
SHOX2-205ENST00000490689 LDHAL6AQ6ZMR3 332 aa14.65□□□□□ -0.06
SHOX2-205ENST00000490689 GPIHBP1Q8IV16 184 aa14.65□□□□□ -0.06
SHOX2-205ENST00000490689 ZKSCAN3Q9BRR0 538 aa14.65□□□□□ -0.06
SHOX2-205ENST00000490689 RANBP6O60518 1105 aaKnown RBP14.65□□□□□ -0.06
SHOX2-205ENST00000490689 RESTQ13127 1097 aa14.65□□□□□ -0.06
SHOX2-205ENST00000490689 ATL3Q6DD88 541 aa14.65□□□□□ -0.06
SHOX2-205ENST00000490689 TTC21AQ8NDW8 1320 aa14.65□□□□□ -0.06
SHOX2-205ENST00000490689 MED14O60244 1454 aa14.65□□□□□ -0.06
SHOX2-205ENST00000490689 EPS15P42566 896 aa14.64□□□□□ -0.07
SHOX2-205ENST00000490689 LRRC7Q96NW7 1537 aa14.64□□□□□ -0.07
SHOX2-205ENST00000490689 CFAP74Q9C0B2 1584 aa14.64□□□□□ -0.07
SHOX2-205ENST00000490689 MAP3K4Q9Y6R4 1608 aa14.64□□□□□ -0.07
SHOX2-205ENST00000490689 PRAMEF22A3QJZ6 481 aa14.64□□□□□ -0.07
SHOX2-205ENST00000490689 KBTBD3Q8NAB2 608 aa14.64□□□□□ -0.07
SHOX2-205ENST00000490689 VPS16Q9H269 839 aa14.64□□□□□ -0.07
SHOX2-205ENST00000490689 DDX21Q9NR30 783 aaKnown RBP eCLIP14.64□□□□□ -0.07
SHOX2-205ENST00000490689 STRN4Q9NRL3 753 aa14.64□□□□□ -0.07
SHOX2-205ENST00000490689 ATP10DQ9P241 1426 aa14.64□□□□□ -0.07
SHOX2-205ENST00000490689 SYCP1Q15431 976 aa14.64□□□□□ -0.07
SHOX2-205ENST00000490689 NBPF11Q86T75 865 aa14.64□□□□□ -0.07
SHOX2-205ENST00000490689 CWC25Q9NXE8 425 aaPredicted RBP14.64□□□□□ -0.07
SHOX2-205ENST00000490689 MORC2Q9Y6X9 1032 aaPredicted RBP14.64□□□□□ -0.07
SHOX2-205ENST00000490689 ATP2C2O75185 946 aa14.63□□□□□ -0.07
SHOX2-205ENST00000490689 NBPF6Q5VWK0 638 aa14.63□□□□□ -0.07
SHOX2-205ENST00000490689 NUTM2AQ8IVF1 878 aaPredicted RBP14.63□□□□□ -0.07
SHOX2-205ENST00000490689 NSUN7Q8NE18 718 aaKnown RBP14.63□□□□□ -0.07
SHOX2-205ENST00000490689 NBPF4Q96M43 638 aa14.63□□□□□ -0.07
SHOX2-205ENST00000490689 PDE11AQ9HCR9 933 aa14.63□□□□□ -0.07
SHOX2-205ENST00000490689 GPHNQ9NQX3 736 aaPredicted RBP14.63□□□□□ -0.07
SHOX2-205ENST00000490689 MYO5CQ9NQX4 1742 aa14.63□□□□□ -0.07
SHOX2-205ENST00000490689 TOB2Q14106 344 aaPredicted RBP14.63□□□□□ -0.07
SHOX2-205ENST00000490689 IQCEQ6IPM2 695 aa14.63□□□□□ -0.07
SHOX2-205ENST00000490689 BCCIPQ9P287 314 aaKnown RBP eCLIP14.63□□□□□ -0.07
SHOX2-205ENST00000490689 RCOR1Q9UKL0 485 aa14.63□□□□□ -0.07
SHOX2-205ENST00000490689 B4E1Z4 1266 aa14.63□□□□□ -0.07
SHOX2-205ENST00000490689 ZEB2O60315 1214 aa14.63□□□□□ -0.07
SHOX2-205ENST00000490689 SSBP05455 408 aaKnown RBP eCLIP14.63□□□□□ -0.07
SHOX2-205ENST00000490689 ADD1P35611 737 aaKnown RBP14.63□□□□□ -0.07
SHOX2-205ENST00000490689 ZHX3Q9H4I2 956 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms