RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 MAP3K1Q13233 1512 aa5.51□□□□□ -1.53
PRPF38B-205ENST00000485810 RRBP1Q9P2E9 1410 aaKnown RBP5.51□□□□□ -1.53
PRPF38B-205ENST00000485810 TNFRSF10BO14763 440 aa5.51□□□□□ -1.53
PRPF38B-205ENST00000485810 ZBTB39O15060 712 aa5.51□□□□□ -1.53
PRPF38B-205ENST00000485810 DDX3YO15523 660 aaKnown RBP5.51□□□□□ -1.53
PRPF38B-205ENST00000485810 TRIM42Q8IWZ5 723 aa5.51□□□□□ -1.53
PRPF38B-205ENST00000485810 OR13H1Q8NG92 308 aa5.51□□□□□ -1.53
PRPF38B-205ENST00000485810 NAP1L5Q96NT1 182 aaPredicted RBP5.51□□□□□ -1.53
PRPF38B-205ENST00000485810 ARAP1Q96P48 1450 aa5.51□□□□□ -1.53
PRPF38B-205ENST00000485810 CUX1P39880 1505 aa5.5□□□□□ -1.53
PRPF38B-205ENST00000485810 HMX2A2RU54 273 aa5.5□□□□□ -1.53
PRPF38B-205ENST00000485810 GSC2O15499 205 aa5.5□□□□□ -1.53
PRPF38B-205ENST00000485810 CD68P34810 354 aaPredicted RBP5.5□□□□□ -1.53
PRPF38B-205ENST00000485810 CLP1Q92989 425 aaKnown RBP5.5□□□□□ -1.53
PRPF38B-205ENST00000485810 CARD10Q9BWT7 1032 aa5.5□□□□□ -1.53
PRPF38B-205ENST00000485810 LACRTQ9GZZ8 138 aa5.5□□□□□ -1.53
PRPF38B-205ENST00000485810 BRPF3Q9ULD4 1205 aa5.5□□□□□ -1.53
PRPF38B-205ENST00000485810 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.5□□□□□ -1.53
PRPF38B-205ENST00000485810 DHX15O43143 795 aaKnown RBP5.49□□□□□ -1.53
PRPF38B-205ENST00000485810 PTCD1O75127 700 aaKnown RBP5.49□□□□□ -1.53
PRPF38B-205ENST00000485810 ATP2B4P23634 1241 aa5.49□□□□□ -1.53
PRPF38B-205ENST00000485810 NFIAQ12857 509 aa5.49□□□□□ -1.53
PRPF38B-205ENST00000485810 RNF43Q68DV7 783 aa5.49□□□□□ -1.53
PRPF38B-205ENST00000485810 ACAD11Q709F0 780 aa5.49□□□□□ -1.53
PRPF38B-205ENST00000485810 DTX1Q86Y01 620 aa5.49□□□□□ -1.53
PRPF38B-205ENST00000485810 CACTIN-AS1Q8N1I8 211 aa5.49□□□□□ -1.53
PRPF38B-205ENST00000485810 MUC3BQ9H195 1237 aa5.49□□□□□ -1.53
PRPF38B-205ENST00000485810 RASSF4Q9H2L5 321 aa5.49□□□□□ -1.53
PRPF38B-205ENST00000485810 ARID1BQ8NFD5 2236 aaPredicted RBP5.48□□□□□ -1.53
PRPF38B-205ENST00000485810 FSCN2O14926 492 aa5.48□□□□□ -1.53
PRPF38B-205ENST00000485810 KIF4AO95239 1232 aa5.48□□□□□ -1.53
PRPF38B-205ENST00000485810 CYP2E1P05181 493 aaPredicted RBP5.48□□□□□ -1.53
PRPF38B-205ENST00000485810 CDC27P30260 824 aa5.48□□□□□ -1.53
PRPF38B-205ENST00000485810 CDC25BP30305 580 aa5.48□□□□□ -1.53
PRPF38B-205ENST00000485810 SETQ01105 290 aaPredicted RBP5.48□□□□□ -1.53
PRPF38B-205ENST00000485810 FZD5Q13467 585 aa5.48□□□□□ -1.53
PRPF38B-205ENST00000485810 LCE1DQ5T752 114 aa5.48□□□□□ -1.53
PRPF38B-205ENST00000485810 CEP135Q66GS9 1140 aa5.48□□□□□ -1.53
PRPF38B-205ENST00000485810 ATCAYQ86WG3 371 aa5.48□□□□□ -1.53
PRPF38B-205ENST00000485810 GPR152Q8TDT2 470 aa5.48□□□□□ -1.53
PRPF38B-205ENST00000485810 UBASH3BQ8TF42 649 aa5.48□□□□□ -1.53
PRPF38B-205ENST00000485810 KLHDC7BQ96G42 594 aa5.48□□□□□ -1.53
PRPF38B-205ENST00000485810 MYRFLQ96LU7 910 aa5.48□□□□□ -1.53
PRPF38B-205ENST00000485810 UBAP1LF5GYI3 381 aa5.47□□□□□ -1.53
PRPF38B-205ENST00000485810 PTMSP20962 102 aa5.47□□□□□ -1.53
PRPF38B-205ENST00000485810 EPHA1P21709 976 aa5.47□□□□□ -1.53
PRPF38B-205ENST00000485810 ZAP70P43403 619 aa5.47□□□□□ -1.53
PRPF38B-205ENST00000485810 CEP120Q8N960 986 aa5.47□□□□□ -1.53
PRPF38B-205ENST00000485810 DCAF11Q8TEB1 546 aa5.47□□□□□ -1.53
PRPF38B-205ENST00000485810 RBSNQ9H1K0 784 aa5.47□□□□□ -1.53
PRPF38B-205ENST00000485810 SH2B1Q9NRF2 756 aaPredicted RBP5.47□□□□□ -1.53
PRPF38B-205ENST00000485810 RNF114Q9Y508 228 aa5.47□□□□□ -1.53
PRPF38B-205ENST00000485810 PRDM2Q13029 1718 aa5.47□□□□□ -1.53
PRPF38B-205ENST00000485810 A0A0U1RQG5 324 aaPredicted RBP5.46□□□□□ -1.54
PRPF38B-205ENST00000485810 NCLP19338 710 aaKnown RBP5.46□□□□□ -1.54
PRPF38B-205ENST00000485810 HOXA10P31260 410 aaPredicted RBP5.46□□□□□ -1.54
PRPF38B-205ENST00000485810 HYAL2Q12891 473 aa5.46□□□□□ -1.54
PRPF38B-205ENST00000485810 CCDC27Q2M243 656 aa5.46□□□□□ -1.54
PRPF38B-205ENST00000485810 ZNF526Q8TF50 670 aaPredicted RBP5.46□□□□□ -1.54
PRPF38B-205ENST00000485810 UTP4Q969X6 686 aaKnown RBP5.46□□□□□ -1.54
PRPF38B-205ENST00000485810 POP1Q99575 1024 aaKnown RBP5.46□□□□□ -1.54
PRPF38B-205ENST00000485810 DBNDD2Q9BQY9 259 aa5.46□□□□□ -1.54
PRPF38B-205ENST00000485810 KRTAP17-1Q9BYP8 105 aa5.46□□□□□ -1.54
PRPF38B-205ENST00000485810 ADAM19Q9H013 955 aa5.46□□□□□ -1.54
PRPF38B-205ENST00000485810 STIM2Q9P246 746 aa5.46□□□□□ -1.54
PRPF38B-205ENST00000485810 ADGRE2Q9UHX3 823 aa5.46□□□□□ -1.54
PRPF38B-205ENST00000485810 DHX57Q6P158 1386 aaKnown RBP5.46□□□□□ -1.54
PRPF38B-205ENST00000485810 ARHGAP35Q9NRY4 1499 aa5.46□□□□□ -1.54
PRPF38B-205ENST00000485810 TMEM88BA6NKF7 163 aa5.45□□□□□ -1.54
PRPF38B-205ENST00000485810 PATL2C9JE40 543 aaKnown RBP5.45□□□□□ -1.54
PRPF38B-205ENST00000485810 MTMR3Q13615 1198 aa5.45□□□□□ -1.54
PRPF38B-205ENST00000485810 UVSSAQ2YD98 709 aa5.45□□□□□ -1.54
PRPF38B-205ENST00000485810 INTS5Q6P9B9 1019 aaKnown RBP5.45□□□□□ -1.54
PRPF38B-205ENST00000485810 FAM20CQ8IXL6 584 aa5.45□□□□□ -1.54
PRPF38B-205ENST00000485810 SHKBP1Q8TBC3 707 aa5.45□□□□□ -1.54
PRPF38B-205ENST00000485810 FAM83CQ9BQN1 747 aa5.45□□□□□ -1.54
PRPF38B-205ENST00000485810 PBX4Q9BYU1 374 aa5.45□□□□□ -1.54
PRPF38B-205ENST00000485810 CEP41Q9BYV8 373 aa5.45□□□□□ -1.54
PRPF38B-205ENST00000485810 ACPPP15309 386 aa5.44□□□□□ -1.54
PRPF38B-205ENST00000485810 PREPP48147 710 aa5.44□□□□□ -1.54
PRPF38B-205ENST00000485810 DUOXA2Q1HG44 320 aa5.44□□□□□ -1.54
PRPF38B-205ENST00000485810 HGSNATQ68CP4 663 aa5.44□□□□□ -1.54
PRPF38B-205ENST00000485810 CLEC10AQ8IUN9 316 aa5.44□□□□□ -1.54
PRPF38B-205ENST00000485810 PIK3R5Q8WYR1 880 aa5.44□□□□□ -1.54
PRPF38B-205ENST00000485810 CCDC136Q96JN2 1154 aa5.44□□□□□ -1.54
PRPF38B-205ENST00000485810 AMOTL2Q9Y2J4 779 aa5.44□□□□□ -1.54
PRPF38B-205ENST00000485810 CADPSQ9ULU8 1353 aa5.44□□□□□ -1.54
PRPF38B-205ENST00000485810 CCNB3Q8WWL7 1395 aa5.43□□□□□ -1.54
PRPF38B-205ENST00000485810 NFKBIEO00221 500 aa5.43□□□□□ -1.54
PRPF38B-205ENST00000485810 SMNDC1O75940 238 aaKnown RBP eCLIP5.43□□□□□ -1.543e-7■■□□□ 13.7
PRPF38B-205ENST00000485810 BMP3P12645 472 aa5.43□□□□□ -1.54
PRPF38B-205ENST00000485810 GRIK1P39086 918 aa5.43□□□□□ -1.54
PRPF38B-205ENST00000485810 IRX6P78412 446 aaPredicted RBP5.43□□□□□ -1.54
PRPF38B-205ENST00000485810 NFXL1Q6ZNB6 911 aa5.43□□□□□ -1.54
PRPF38B-205ENST00000485810 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.43□□□□□ -1.54
PRPF38B-205ENST00000485810 SHISA5Q8N114 240 aa5.43□□□□□ -1.54
PRPF38B-205ENST00000485810 KLHL23Q8NBE8 558 aa5.43□□□□□ -1.54
PRPF38B-205ENST00000485810 PLCD4Q9BRC7 762 aa5.43□□□□□ -1.54
PRPF38B-205ENST00000485810 CNTN3Q9P232 1028 aa5.43□□□□□ -1.54
PRPF38B-205ENST00000485810 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms