RNA–Protein interactions for RNA: ENST00000478238.1

SYCP3-205, Transcript of synaptonemal complex protein 3, humanhuman

TSL 3

Gene SYCP3, Length 665 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-205ENST00000478238 RUSC1Q9BVN2 902 aa9.21□□□□□ -0.94
SYCP3-205ENST00000478238 C7orf69Q9H7B7 122 aa9.21□□□□□ -0.94
SYCP3-205ENST00000478238 PCMTD2Q9NV79 361 aa9.21□□□□□ -0.94
SYCP3-205ENST00000478238 AMOTL2Q9Y2J4 779 aa9.21□□□□□ -0.94
SYCP3-205ENST00000478238 SOX1O00570 391 aaPredicted RBP9.2□□□□□ -0.94
SYCP3-205ENST00000478238 SART1O43290 800 aaKnown RBP9.2□□□□□ -0.94
SYCP3-205ENST00000478238 PREPP48147 710 aa9.2□□□□□ -0.94
SYCP3-205ENST00000478238 IKBKEQ14164 716 aa9.2□□□□□ -0.94
SYCP3-205ENST00000478238 TRIM42Q8IWZ5 723 aa9.2□□□□□ -0.94
SYCP3-205ENST00000478238 BHLHE41Q9C0J9 482 aaPredicted RBP9.2□□□□□ -0.94
SYCP3-205ENST00000478238 LATS2Q9NRM7 1088 aa9.2□□□□□ -0.94
SYCP3-205ENST00000478238 CD97P48960 835 aa9.19□□□□□ -0.94
SYCP3-205ENST00000478238 NFIAQ12857 509 aa9.19□□□□□ -0.94
SYCP3-205ENST00000478238 PEAR1Q5VY43 1037 aaPredicted RBP9.19□□□□□ -0.94
SYCP3-205ENST00000478238 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.19□□□□□ -0.94
SYCP3-205ENST00000478238 FAM20CQ8IXL6 584 aa9.19□□□□□ -0.94
SYCP3-205ENST00000478238 ASAP3Q8TDY4 903 aa9.19□□□□□ -0.94
SYCP3-205ENST00000478238 ZFYVE28Q9HCC9 887 aa9.19□□□□□ -0.94
SYCP3-205ENST00000478238 USTQ9Y2C2 406 aa9.19□□□□□ -0.94
SYCP3-205ENST00000478238 HMX2A2RU54 273 aa9.18□□□□□ -0.94
SYCP3-205ENST00000478238 TGFB1P01137 390 aa9.18□□□□□ -0.94
SYCP3-205ENST00000478238 RNF43Q68DV7 783 aa9.18□□□□□ -0.94
SYCP3-205ENST00000478238 FDX2Q6P4F2 183 aa9.18□□□□□ -0.94
SYCP3-205ENST00000478238 ZDHHC13Q8IUH4 622 aa9.18□□□□□ -0.94
SYCP3-205ENST00000478238 CLEC10AQ8IUN9 316 aa9.18□□□□□ -0.94
SYCP3-205ENST00000478238 MEGF11A6BM72 1044 aa9.17□□□□□ -0.94
SYCP3-205ENST00000478238 BMP3P12645 472 aa9.17□□□□□ -0.94
SYCP3-205ENST00000478238 EGFL7Q9UHF1 273 aa9.17□□□□□ -0.94
SYCP3-205ENST00000478238 ICMTO60725 284 aa9.16□□□□□ -0.94
SYCP3-205ENST00000478238 POLR3DP05423 398 aaPredicted RBP9.16□□□□□ -0.94
SYCP3-205ENST00000478238 B4GALNT3Q6L9W6 998 aa9.16□□□□□ -0.94
SYCP3-205ENST00000478238 BEND4Q6ZU67 534 aa9.16□□□□□ -0.94
SYCP3-205ENST00000478238 FAM83CQ9BQN1 747 aa9.16□□□□□ -0.94
SYCP3-205ENST00000478238 DBNDD2Q9BQY9 259 aa9.16□□□□□ -0.94
SYCP3-205ENST00000478238 KCNF1Q9H3M0 494 aa9.16□□□□□ -0.94
SYCP3-205ENST00000478238 SOX17Q9H6I2 414 aaPredicted RBP9.16□□□□□ -0.94
SYCP3-205ENST00000478238 HIF3AQ9Y2N7 669 aa9.16□□□□□ -0.94
SYCP3-205ENST00000478238 LOC100289279A0A1B0GTE1 492 aa9.15□□□□□ -0.94
SYCP3-205ENST00000478238 METTL12A8MUP2 240 aa9.15□□□□□ -0.94
SYCP3-205ENST00000478238 COBLO75128 1261 aa9.15□□□□□ -0.94
SYCP3-205ENST00000478238 MED26O95402 600 aa9.15□□□□□ -0.94
SYCP3-205ENST00000478238 ESRRAP11474 423 aaPredicted RBP9.15□□□□□ -0.94
SYCP3-205ENST00000478238 USP26Q9BXU7 913 aa9.15□□□□□ -0.94
SYCP3-205ENST00000478238 H3BRB1 525 aa9.14□□□□□ -0.95
SYCP3-205ENST00000478238 GAS2O43903 313 aaKnown RBP9.14□□□□□ -0.95
SYCP3-205ENST00000478238 SERPINB4P48594 390 aa9.14□□□□□ -0.95
SYCP3-205ENST00000478238 TMPRSS13Q9BYE2 586 aa9.14□□□□□ -0.95
SYCP3-205ENST00000478238 TUT1Q9H6E5 874 aaKnown RBP9.14□□□□□ -0.95
SYCP3-205ENST00000478238 KIAA1324LA8MWY0 1029 aaPredicted RBP9.13□□□□□ -0.95
SYCP3-205ENST00000478238 NUTM2GQ5VZR2 741 aa9.13□□□□□ -0.95
SYCP3-205ENST00000478238 GLYCTKQ8IVS8 523 aa9.13□□□□□ -0.95
SYCP3-205ENST00000478238 BRPF3Q9ULD4 1205 aa9.13□□□□□ -0.95
SYCP3-205ENST00000478238 DLGAP3O95886 979 aa9.12□□□□□ -0.95
SYCP3-205ENST00000478238 ECM1Q16610 540 aa9.12□□□□□ -0.95
SYCP3-205ENST00000478238 GALNT12Q8IXK2 581 aa9.12□□□□□ -0.95
SYCP3-205ENST00000478238 SMG8Q8ND04 991 aaKnown RBP9.12□□□□□ -0.95
SYCP3-205ENST00000478238 CYP4F12Q9HCS2 524 aa9.12□□□□□ -0.95
SYCP3-205ENST00000478238 A0A096LPE4 126 aa9.11□□□□□ -0.95
SYCP3-205ENST00000478238 A0A1W2PP55 124 aa9.11□□□□□ -0.95
SYCP3-205ENST00000478238 A0A1W2PPZ6 126 aa9.11□□□□□ -0.95
SYCP3-205ENST00000478238 PRR19A6NJB7 356 aa9.11□□□□□ -0.95
SYCP3-205ENST00000478238 TIAF1O95411 115 aa9.11□□□□□ -0.95
SYCP3-205ENST00000478238 GSTM4Q03013 218 aa9.11□□□□□ -0.95
SYCP3-205ENST00000478238 SGO2Q562F6 1265 aa9.11□□□□□ -0.95
SYCP3-205ENST00000478238 CCNJLQ8IV13 435 aa9.11□□□□□ -0.95
SYCP3-205ENST00000478238 C12orf50Q8NA57 414 aaPredicted RBP9.11□□□□□ -0.95
SYCP3-205ENST00000478238 SHKBP1Q8TBC3 707 aa9.11□□□□□ -0.95
SYCP3-205ENST00000478238 KRTAP9-2Q9BYQ4 174 aa9.11□□□□□ -0.95
SYCP3-205ENST00000478238 SUGCTQ9HAC7 445 aa9.11□□□□□ -0.95
SYCP3-205ENST00000478238 MAP4P27816 1152 aaKnown RBP9.1□□□□□ -0.95
SYCP3-205ENST00000478238 GRIK1P39086 918 aa9.1□□□□□ -0.95
SYCP3-205ENST00000478238 INTS5Q6P9B9 1019 aaKnown RBP9.1□□□□□ -0.95
SYCP3-205ENST00000478238 TCF12Q99081 682 aa9.1□□□□□ -0.95
SYCP3-205ENST00000478238 LIN7BQ9HAP6 207 aa9.1□□□□□ -0.95
SYCP3-205ENST00000478238 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.09□□□□□ -0.95
SYCP3-205ENST00000478238 GRIA4P48058 902 aa9.09□□□□□ -0.95
SYCP3-205ENST00000478238 ARHGAP4P98171 946 aa9.09□□□□□ -0.95
SYCP3-205ENST00000478238 PCDH1Q08174 1060 aa9.09□□□□□ -0.95
SYCP3-205ENST00000478238 EXOSC6Q5RKV6 272 aaKnown RBP9.09□□□□□ -0.95
SYCP3-205ENST00000478238 USPL1Q5W0Q7 1092 aa9.09□□□□□ -0.95
SYCP3-205ENST00000478238 NRSN2Q9GZP1 204 aa9.09□□□□□ -0.95
SYCP3-205ENST00000478238 CLEC4MQ9H2X3 399 aaPredicted RBP9.09□□□□□ -0.95
SYCP3-205ENST00000478238 NDUFB5O43674 189 aa9.08□□□□□ -0.96
SYCP3-205ENST00000478238 EIF4EBP3O60516 100 aaPredicted RBP9.08□□□□□ -0.96
SYCP3-205ENST00000478238 SPINK2P20155 84 aa9.08□□□□□ -0.96
SYCP3-205ENST00000478238 RXRBP28702 533 aa9.08□□□□□ -0.96
SYCP3-205ENST00000478238 ZNF423Q2M1K9 1284 aa9.08□□□□□ -0.96
SYCP3-205ENST00000478238 SPRED3Q2MJR0 410 aa9.08□□□□□ -0.96
SYCP3-205ENST00000478238 MFSD14AQ96MC6 490 aa9.08□□□□□ -0.96
SYCP3-205ENST00000478238 WDR64B1ANS9 1081 aa9.07□□□□□ -0.96
SYCP3-205ENST00000478238 NEFLP07196 543 aa9.07□□□□□ -0.96
SYCP3-205ENST00000478238 DRD2P14416 443 aa9.07□□□□□ -0.96
SYCP3-205ENST00000478238 KRTAP9-6A0A140TA67 174 aa9.06□□□□□ -0.96
SYCP3-205ENST00000478238 PDE3BQ13370 1112 aa9.06□□□□□ -0.96
SYCP3-205ENST00000478238 ORC1Q13415 861 aa9.06□□□□□ -0.96
SYCP3-205ENST00000478238 FAM129BQ96TA1 746 aa9.06□□□□□ -0.96
SYCP3-205ENST00000478238 KIAA0319Q5VV43 1072 aa9.05□□□□□ -0.96
SYCP3-205ENST00000478238 MCTP1Q6DN14 999 aa9.05□□□□□ -0.96
SYCP3-205ENST00000478238 RETREG2Q8NC44 543 aa9.05□□□□□ -0.96
SYCP3-205ENST00000478238 C2CD4AQ8NCU7 369 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms