RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 PREPP48147 710 aa6.94□□□□□ -1.3
CCDC58-203ENST00000466854 VN1R5Q7Z5H4 357 aa6.94□□□□□ -1.3
CCDC58-203ENST00000466854 SNX29Q8TEQ0 813 aa6.94□□□□□ -1.3
CCDC58-203ENST00000466854 SLC7A3Q8WY07 619 aa6.94□□□□□ -1.3
CCDC58-203ENST00000466854 PMEPA1Q969W9 287 aa6.94□□□□□ -1.3
CCDC58-203ENST00000466854 C7orf69Q9H7B7 122 aa6.94□□□□□ -1.3
CCDC58-203ENST00000466854 HMX2A2RU54 273 aa6.93□□□□□ -1.3
CCDC58-203ENST00000466854 GSC2O15499 205 aa6.93□□□□□ -1.3
CCDC58-203ENST00000466854 PHACTR2O75167 634 aa6.93□□□□□ -1.3
CCDC58-203ENST00000466854 FAM13AO94988 1023 aa6.93□□□□□ -1.3
CCDC58-203ENST00000466854 YBX3P16989 372 aaKnown RBP eCLIP6.93□□□□□ -1.3
CCDC58-203ENST00000466854 PEAR1Q5VY43 1037 aaPredicted RBP6.93□□□□□ -1.3
CCDC58-203ENST00000466854 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.93□□□□□ -1.3
CCDC58-203ENST00000466854 ZDHHC13Q8IUH4 622 aa6.93□□□□□ -1.3
CCDC58-203ENST00000466854 TRIM42Q8IWZ5 723 aa6.93□□□□□ -1.3
CCDC58-203ENST00000466854 TTC16Q8NEE8 873 aa6.93□□□□□ -1.3
CCDC58-203ENST00000466854 LATS2Q9NRM7 1088 aa6.93□□□□□ -1.3
CCDC58-203ENST00000466854 PCMTD2Q9NV79 361 aa6.93□□□□□ -1.3
CCDC58-203ENST00000466854 CCDC87Q9NVE4 849 aa6.93□□□□□ -1.3
CCDC58-203ENST00000466854 SOX1O00570 391 aaPredicted RBP6.92□□□□□ -1.3
CCDC58-203ENST00000466854 NFIAQ12857 509 aa6.92□□□□□ -1.3
CCDC58-203ENST00000466854 ZNF211Q13398 564 aaPredicted RBP6.92□□□□□ -1.3
CCDC58-203ENST00000466854 SF3B2Q13435 895 aaKnown RBP6.92□□□□□ -1.3
CCDC58-203ENST00000466854 FAM20CQ8IXL6 584 aa6.92□□□□□ -1.3
CCDC58-203ENST00000466854 GJD3Q8N144 294 aa6.92□□□□□ -1.3
CCDC58-203ENST00000466854 BSNDQ8WZ55 320 aa6.92□□□□□ -1.3
CCDC58-203ENST00000466854 KRTAP4-11Q9BYQ6 195 aa6.92□□□□□ -1.3
CCDC58-203ENST00000466854 RNF208Q9H0X6 261 aa6.92□□□□□ -1.3
CCDC58-203ENST00000466854 ANO2Q9NQ90 1003 aa6.92□□□□□ -1.3
CCDC58-203ENST00000466854 KIAA1324LA8MWY0 1029 aaPredicted RBP6.91□□□□□ -1.3
CCDC58-203ENST00000466854 EDN3P14138 238 aa6.91□□□□□ -1.3
CCDC58-203ENST00000466854 USP5P45974 858 aa6.91□□□□□ -1.3
CCDC58-203ENST00000466854 FKBP4Q02790 459 aaKnown RBP eCLIP6.91□□□□□ -1.3
CCDC58-203ENST00000466854 EHHADHQ08426 723 aa6.91□□□□□ -1.3
CCDC58-203ENST00000466854 C19orf57Q0VDD7 668 aa6.91□□□□□ -1.3
CCDC58-203ENST00000466854 AAMPQ13685 434 aa6.91□□□□□ -1.3
CCDC58-203ENST00000466854 RNF43Q68DV7 783 aa6.91□□□□□ -1.3
CCDC58-203ENST00000466854 ANKRD34AQ69YU3 496 aa6.91□□□□□ -1.3
CCDC58-203ENST00000466854 RUSC1Q9BVN2 902 aa6.91□□□□□ -1.3
CCDC58-203ENST00000466854 BHLHE41Q9C0J9 482 aaPredicted RBP6.91□□□□□ -1.3
CCDC58-203ENST00000466854 ABL1P00519 1130 aa6.9□□□□□ -1.3
CCDC58-203ENST00000466854 IKBKEQ14164 716 aa6.9□□□□□ -1.3
CCDC58-203ENST00000466854 MEGF11A6BM72 1044 aa6.89□□□□□ -1.31
CCDC58-203ENST00000466854 PRR19A6NJB7 356 aa6.89□□□□□ -1.31
CCDC58-203ENST00000466854 METTL12A8MUP2 240 aa6.89□□□□□ -1.31
CCDC58-203ENST00000466854 DLGAP3O95886 979 aa6.89□□□□□ -1.31
CCDC58-203ENST00000466854 BMP3P12645 472 aa6.89□□□□□ -1.31
CCDC58-203ENST00000466854 CLEC10AQ8IUN9 316 aa6.89□□□□□ -1.31
CCDC58-203ENST00000466854 ASAP3Q8TDY4 903 aa6.89□□□□□ -1.31
CCDC58-203ENST00000466854 FAM83CQ9BQN1 747 aa6.89□□□□□ -1.31
CCDC58-203ENST00000466854 DBNDD2Q9BQY9 259 aa6.89□□□□□ -1.31
CCDC58-203ENST00000466854 TMPRSS13Q9BYE2 586 aa6.89□□□□□ -1.31
CCDC58-203ENST00000466854 MTMR7Q9Y216 660 aa6.89□□□□□ -1.31
CCDC58-203ENST00000466854 AMOTL2Q9Y2J4 779 aa6.89□□□□□ -1.31
CCDC58-203ENST00000466854 LOC100289279A0A1B0GTE1 492 aa6.88□□□□□ -1.31
CCDC58-203ENST00000466854 SART1O43290 800 aaKnown RBP6.88□□□□□ -1.31
CCDC58-203ENST00000466854 POLR3DP05423 398 aaPredicted RBP6.88□□□□□ -1.31
CCDC58-203ENST00000466854 ESRRAP11474 423 aaPredicted RBP6.88□□□□□ -1.31
CCDC58-203ENST00000466854 ARL4DP49703 201 aa6.88□□□□□ -1.31
CCDC58-203ENST00000466854 ECM1Q16610 540 aa6.88□□□□□ -1.31
CCDC58-203ENST00000466854 FDX2Q6P4F2 183 aa6.88□□□□□ -1.31
CCDC58-203ENST00000466854 BEND4Q6ZU67 534 aa6.88□□□□□ -1.31
CCDC58-203ENST00000466854 SOX17Q9H6I2 414 aaPredicted RBP6.88□□□□□ -1.31
CCDC58-203ENST00000466854 ZFYVE28Q9HCC9 887 aa6.88□□□□□ -1.31
CCDC58-203ENST00000466854 ADAMTS4O75173 837 aa6.87□□□□□ -1.31
CCDC58-203ENST00000466854 TIAF1O95411 115 aa6.87□□□□□ -1.31
CCDC58-203ENST00000466854 SPINK2P20155 84 aa6.87□□□□□ -1.31
CCDC58-203ENST00000466854 USP26Q9BXU7 913 aa6.87□□□□□ -1.31
CCDC58-203ENST00000466854 NRSN2Q9GZP1 204 aa6.87□□□□□ -1.31
CCDC58-203ENST00000466854 KCNF1Q9H3M0 494 aa6.87□□□□□ -1.31
CCDC58-203ENST00000466854 HIF3AQ9Y2N7 669 aa6.87□□□□□ -1.31
CCDC58-203ENST00000466854 ICMTO60725 284 aa6.86□□□□□ -1.31
CCDC58-203ENST00000466854 SGO2Q562F6 1265 aa6.86□□□□□ -1.31
CCDC58-203ENST00000466854 SMG8Q8ND04 991 aaKnown RBP6.86□□□□□ -1.31
CCDC58-203ENST00000466854 SHKBP1Q8TBC3 707 aa6.86□□□□□ -1.31
CCDC58-203ENST00000466854 SUGCTQ9HAC7 445 aa6.86□□□□□ -1.31
CCDC58-203ENST00000466854 EGFL7Q9UHF1 273 aa6.86□□□□□ -1.31
CCDC58-203ENST00000466854 SERPINB4P48594 390 aa6.85□□□□□ -1.31
CCDC58-203ENST00000466854 MCTP1Q6DN14 999 aa6.85□□□□□ -1.31
CCDC58-203ENST00000466854 USTQ9Y2C2 406 aa6.85□□□□□ -1.31
CCDC58-203ENST00000466854 A0A1W2PP55 124 aa6.84□□□□□ -1.31
CCDC58-203ENST00000466854 GAS2O43903 313 aaKnown RBP6.84□□□□□ -1.31
CCDC58-203ENST00000466854 MAP4P27816 1152 aaKnown RBP6.84□□□□□ -1.31
CCDC58-203ENST00000466854 NUTM2GQ5VZR2 741 aa6.84□□□□□ -1.31
CCDC58-203ENST00000466854 USPL1Q5W0Q7 1092 aa6.84□□□□□ -1.31
CCDC58-203ENST00000466854 CCNJLQ8IV13 435 aa6.84□□□□□ -1.31
CCDC58-203ENST00000466854 GALNT12Q8IXK2 581 aa6.84□□□□□ -1.31
CCDC58-203ENST00000466854 TCF12Q99081 682 aa6.84□□□□□ -1.31
CCDC58-203ENST00000466854 OAS3Q9Y6K5 1087 aaKnown RBP6.84□□□□□ -1.31
CCDC58-203ENST00000466854 H3BRB1 525 aa6.83□□□□□ -1.32
CCDC58-203ENST00000466854 DRD2P14416 443 aa6.83□□□□□ -1.32
CCDC58-203ENST00000466854 GRIA4P48058 902 aa6.83□□□□□ -1.32
CCDC58-203ENST00000466854 ARHGAP4P98171 946 aa6.83□□□□□ -1.32
CCDC58-203ENST00000466854 GSTM4Q03013 218 aa6.83□□□□□ -1.32
CCDC58-203ENST00000466854 SPRED3Q2MJR0 410 aa6.83□□□□□ -1.32
CCDC58-203ENST00000466854 INTS5Q6P9B9 1019 aaKnown RBP6.83□□□□□ -1.32
CCDC58-203ENST00000466854 DTX1Q86Y01 620 aa6.83□□□□□ -1.32
CCDC58-203ENST00000466854 C12orf50Q8NA57 414 aaPredicted RBP6.83□□□□□ -1.32
CCDC58-203ENST00000466854 MFSD14AQ96MC6 490 aa6.83□□□□□ -1.32
CCDC58-203ENST00000466854 TUT1Q9H6E5 874 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms