RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 ITGA6P23229 1130 aa4.64□□□□□ -1.67
SORT1-202ENST00000466471 WEE1P30291 646 aa4.64□□□□□ -1.67
SORT1-202ENST00000466471 GTF2IP78347 998 aa4.64□□□□□ -1.67
SORT1-202ENST00000466471 ARHGAP4P98171 946 aa4.64□□□□□ -1.67
SORT1-202ENST00000466471 USP4Q13107 963 aa4.64□□□□□ -1.67
SORT1-202ENST00000466471 ECM1Q16610 540 aa4.64□□□□□ -1.67
SORT1-202ENST00000466471 NAALADL2Q58DX5 795 aa4.64□□□□□ -1.67
SORT1-202ENST00000466471 INTS6LQ5JSJ4 861 aaKnown RBP4.64□□□□□ -1.67
SORT1-202ENST00000466471 ZNF385CQ66K41 422 aaPredicted RBP4.64□□□□□ -1.67
SORT1-202ENST00000466471 CCDC102BQ68D86 513 aa4.64□□□□□ -1.67
SORT1-202ENST00000466471 SVOPQ8N4V2 548 aa4.64□□□□□ -1.67
SORT1-202ENST00000466471 NANOS1Q8WY41 292 aaKnown RBP4.64□□□□□ -1.67
SORT1-202ENST00000466471 ZNF594Q96JF6 807 aaPredicted RBP4.64□□□□□ -1.67
SORT1-202ENST00000466471 OCSTAMPQ9BR26 566 aa4.64□□□□□ -1.67
SORT1-202ENST00000466471 POLMQ9NP87 494 aaPredicted RBP4.64□□□□□ -1.67
SORT1-202ENST00000466471 METTL5Q9NRN9 209 aaKnown RBP4.64□□□□□ -1.67
SORT1-202ENST00000466471 WNK3Q9BYP7 1800 aa4.64□□□□□ -1.67
SORT1-202ENST00000466471 SPATA31A1Q5TZJ5 1347 aa4.64□□□□□ -1.67
SORT1-202ENST00000466471 PHRF1Q9P1Y6 1649 aaKnown RBP4.64□□□□□ -1.67
SORT1-202ENST00000466471 HFM1A2PYH4 1435 aa4.63□□□□□ -1.67
SORT1-202ENST00000466471 TECPR2O15040 1411 aa4.63□□□□□ -1.67
SORT1-202ENST00000466471 TRPM3Q9HCF6 1732 aaPredicted RBP4.63□□□□□ -1.67
SORT1-202ENST00000466471 AKAP12Q02952 1782 aa4.63□□□□□ -1.67
SORT1-202ENST00000466471 ABL1P00519 1130 aa4.63□□□□□ -1.67
SORT1-202ENST00000466471 RAB15P59190 212 aa4.63□□□□□ -1.67
SORT1-202ENST00000466471 XPCQ01831 940 aaPredicted RBP4.63□□□□□ -1.67
SORT1-202ENST00000466471 SV2AQ7L0J3 742 aa4.63□□□□□ -1.67
SORT1-202ENST00000466471 GAS2L2Q8NHY3 880 aa4.63□□□□□ -1.67
SORT1-202ENST00000466471 ADAM32Q8TC27 787 aa4.63□□□□□ -1.67
SORT1-202ENST00000466471 HELQQ8TDG4 1101 aa4.63□□□□□ -1.67
SORT1-202ENST00000466471 TMPRSS4Q9NRS4 437 aa4.63□□□□□ -1.67
SORT1-202ENST00000466471 BTG4Q9NY30 223 aa4.63□□□□□ -1.67
SORT1-202ENST00000466471 STK32BQ9NY57 414 aa4.63□□□□□ -1.67
SORT1-202ENST00000466471 KIF15Q9NS87 1388 aa4.63□□□□□ -1.67
SORT1-202ENST00000466471 BCL9O00512 1426 aa4.63□□□□□ -1.67
SORT1-202ENST00000466471 DLL1O00548 723 aa4.62□□□□□ -1.67
SORT1-202ENST00000466471 PRMT3O60678 531 aa4.62□□□□□ -1.67
SORT1-202ENST00000466471 IRS1P35568 1242 aa4.62□□□□□ -1.67
SORT1-202ENST00000466471 DHX9Q08211 1270 aaKnown RBP4.62□□□□□ -1.67
SORT1-202ENST00000466471 NBPF20Q3BBV1 942 aa4.62□□□□□ -1.67
SORT1-202ENST00000466471 DZIP3Q86Y13 1208 aaKnown RBP4.62□□□□□ -1.67
SORT1-202ENST00000466471 SLC43A3Q8NBI5 491 aa4.62□□□□□ -1.67
SORT1-202ENST00000466471 GTF3C2Q8WUA4 911 aaPredicted RBP4.62□□□□□ -1.67
SORT1-202ENST00000466471 DMRTB1Q96MA1 342 aa4.62□□□□□ -1.67
SORT1-202ENST00000466471 NLRP2Q9NX02 1062 aa4.62□□□□□ -1.67
SORT1-202ENST00000466471 PCDHGA11Q9Y5H2 935 aa4.62□□□□□ -1.67
SORT1-202ENST00000466471 SBNO1A3KN83 1393 aa4.62□□□□□ -1.67
SORT1-202ENST00000466471 ARHGEF10O15013 1369 aa4.62□□□□□ -1.67
SORT1-202ENST00000466471 PIK3C2AO00443 1686 aa4.61□□□□□ -1.67
SORT1-202ENST00000466471 QRICH2Q9H0J4 1663 aa4.61□□□□□ -1.67
SORT1-202ENST00000466471 KNDC1Q76NI1 1749 aa4.61□□□□□ -1.67
SORT1-202ENST00000466471 RNF225M0QZC1 329 aaPredicted RBP4.61□□□□□ -1.67
SORT1-202ENST00000466471 NDUFB5O43674 189 aa4.61□□□□□ -1.67
SORT1-202ENST00000466471 IGFBP4P22692 258 aa4.61□□□□□ -1.67
SORT1-202ENST00000466471 ERCC5P28715 1186 aaPredicted RBP4.61□□□□□ -1.67
SORT1-202ENST00000466471 CTCFP49711 727 aaPredicted RBP4.61□□□□□ -1.67
SORT1-202ENST00000466471 FMR1Q06787 632 aaKnown RBP eCLIP4.61□□□□□ -1.67
SORT1-202ENST00000466471 RNF217Q8TC41 542 aa4.61□□□□□ -1.67
SORT1-202ENST00000466471 NMRK2Q9NPI5 230 aa4.61□□□□□ -1.67
SORT1-202ENST00000466471 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.61□□□□□ -1.67
SORT1-202ENST00000466471 CUEDC1Q9NWM3 386 aaPredicted RBP4.61□□□□□ -1.67
SORT1-202ENST00000466471 KIAA1024Q9UPX6 916 aa4.61□□□□□ -1.67
SORT1-202ENST00000466471 ROBO2Q9HCK4 1378 aa4.61□□□□□ -1.67
SORT1-202ENST00000466471 NHSQ6T4R5 1651 aa4.61□□□□□ -1.67
SORT1-202ENST00000466471 ESPNB1AK53 854 aa4.6□□□□□ -1.67
SORT1-202ENST00000466471 WASLO00401 505 aaPredicted RBP4.6□□□□□ -1.67
SORT1-202ENST00000466471 TREHO43280 583 aa4.6□□□□□ -1.67
SORT1-202ENST00000466471 ARHGEF15O94989 841 aa4.6□□□□□ -1.67
SORT1-202ENST00000466471 SLURP2P0DP57 97 aa4.6□□□□□ -1.67
SORT1-202ENST00000466471 ADD1P35611 737 aaKnown RBP4.6□□□□□ -1.67
SORT1-202ENST00000466471 PDE3BQ13370 1112 aa4.6□□□□□ -1.67
SORT1-202ENST00000466471 ZNF211Q13398 564 aaPredicted RBP4.6□□□□□ -1.67
SORT1-202ENST00000466471 TSNAXIP1Q2TAA8 658 aa4.6□□□□□ -1.67
SORT1-202ENST00000466471 ESCO1Q5FWF5 840 aa4.6□□□□□ -1.67
SORT1-202ENST00000466471 ALKBH2Q6NS38 261 aa4.6□□□□□ -1.67
SORT1-202ENST00000466471 GPAT2Q6NUI2 795 aa4.6□□□□□ -1.67
SORT1-202ENST00000466471 NOP9Q86U38 636 aaKnown RBP4.6□□□□□ -1.67
SORT1-202ENST00000466471 TPCN2Q8NHX9 752 aa4.6□□□□□ -1.67
SORT1-202ENST00000466471 ALKBH8Q96BT7 664 aaKnown RBP4.6□□□□□ -1.67
SORT1-202ENST00000466471 CCDC85AQ96PX6 553 aaPredicted RBP4.6□□□□□ -1.67
SORT1-202ENST00000466471 BACH2Q9BYV9 841 aa4.6□□□□□ -1.67
SORT1-202ENST00000466471 DNMT3AQ9Y6K1 912 aaPredicted RBP4.6□□□□□ -1.67
SORT1-202ENST00000466471 KANK1Q14678 1352 aa4.6□□□□□ -1.67
SORT1-202ENST00000466471 THSD7BQ9C0I4 1608 aa4.6□□□□□ -1.67
SORT1-202ENST00000466471 RGPD8O14715 1765 aaPredicted RBP4.6□□□□□ -1.67
SORT1-202ENST00000466471 CCDC85CA6NKD9 419 aa4.59□□□□□ -1.67
SORT1-202ENST00000466471 ERVH48-1M5A8F1 160 aa4.59□□□□□ -1.67
SORT1-202ENST00000466471 PRPF40AO75400 957 aaKnown RBP4.59□□□□□ -1.67
SORT1-202ENST00000466471 POLD1P28340 1107 aa4.59□□□□□ -1.67
SORT1-202ENST00000466471 TXNRD1Q16881 649 aa4.59□□□□□ -1.67
SORT1-202ENST00000466471 LYPD4Q6UWN0 246 aa4.59□□□□□ -1.67
SORT1-202ENST00000466471 TRPM1Q7Z4N2 1603 aa4.59□□□□□ -1.67
SORT1-202ENST00000466471 STAG2Q8N3U4 1231 aa4.59□□□□□ -1.67
SORT1-202ENST00000466471 LMO7Q8WWI1 1683 aa4.59□□□□□ -1.67
SORT1-202ENST00000466471 TGIF2Q9GZN2 237 aa4.59□□□□□ -1.67
SORT1-202ENST00000466471 IFT172Q9UG01 1749 aa4.59□□□□□ -1.67
SORT1-202ENST00000466471 UNC80Q8N2C7 3258 aa4.59□□□□□ -1.68
SORT1-202ENST00000466471 NRXN1Q9ULB1 1477 aa4.58□□□□□ -1.68
SORT1-202ENST00000466471 BRD4O60885 1362 aaPredicted RBP4.58□□□□□ -1.68
SORT1-202ENST00000466471 RNF123Q5XPI4 1314 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms