RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 HSCBQ8IWL3 235 aa6.7□□□□□ -1.34
HMGB4-202ENST00000458277 JMYQ8N9B5 988 aa6.7□□□□□ -1.34
HMGB4-202ENST00000458277 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.7□□□□□ -1.34
HMGB4-202ENST00000458277 CEP89Q96ST8 783 aa6.7□□□□□ -1.34
HMGB4-202ENST00000458277 FAM107BQ9H098 131 aa6.7□□□□□ -1.34
HMGB4-202ENST00000458277 SUDS3Q9H7L9 328 aaPredicted RBP6.7□□□□□ -1.34
HMGB4-202ENST00000458277 DOLKQ9UPQ8 538 aa6.7□□□□□ -1.34
HMGB4-202ENST00000458277 PARP3Q9Y6F1 533 aa6.7□□□□□ -1.34
HMGB4-202ENST00000458277 GAPVD1Q14C86 1478 aa6.7□□□□□ -1.34
HMGB4-202ENST00000458277 MAP3K1Q13233 1512 aa6.7□□□□□ -1.34
HMGB4-202ENST00000458277 AQRO60306 1485 aaKnown RBP eCLIP6.69□□□□□ -1.34
HMGB4-202ENST00000458277 GRIN2BQ13224 1484 aa6.69□□□□□ -1.34
HMGB4-202ENST00000458277 MPHOSPH10O00566 681 aaKnown RBP6.69□□□□□ -1.34
HMGB4-202ENST00000458277 CD97P48960 835 aa6.69□□□□□ -1.34
HMGB4-202ENST00000458277 GP2P55259 537 aaKnown RBP6.69□□□□□ -1.34
HMGB4-202ENST00000458277 GSCP56915 257 aaPredicted RBP6.69□□□□□ -1.34
HMGB4-202ENST00000458277 TPM4P67936 248 aa6.69□□□□□ -1.34
HMGB4-202ENST00000458277 IRX1P78414 480 aaPredicted RBP6.69□□□□□ -1.34
HMGB4-202ENST00000458277 TBC1D8BQ0IIM8 1120 aa6.69□□□□□ -1.34
HMGB4-202ENST00000458277 SEMA3FQ13275 785 aa6.69□□□□□ -1.34
HMGB4-202ENST00000458277 UVSSAQ2YD98 709 aa6.69□□□□□ -1.34
HMGB4-202ENST00000458277 CT47A1Q5JQC4 288 aaPredicted RBP6.69□□□□□ -1.34
HMGB4-202ENST00000458277 LRRC69Q6ZNQ3 347 aa6.69□□□□□ -1.34
HMGB4-202ENST00000458277 SUGP1Q8IWZ8 645 aaKnown RBP6.69□□□□□ -1.34
HMGB4-202ENST00000458277 FMR1NBQ8N0W7 255 aaPredicted RBP6.69□□□□□ -1.34
HMGB4-202ENST00000458277 FAM184AQ8NB25 1140 aa6.69□□□□□ -1.34
HMGB4-202ENST00000458277 WFDC12Q8WWY7 111 aa6.69□□□□□ -1.34
HMGB4-202ENST00000458277 SIRT1Q96EB6 747 aa6.69□□□□□ -1.34
HMGB4-202ENST00000458277 CXorf56Q9H5V9 222 aa6.69□□□□□ -1.34
HMGB4-202ENST00000458277 JPH1Q9HDC5 661 aaPredicted RBP6.69□□□□□ -1.34
HMGB4-202ENST00000458277 SERTAD1Q9UHV2 236 aa6.69□□□□□ -1.34
HMGB4-202ENST00000458277 JRKLQ9Y4A0 524 aa6.69□□□□□ -1.34
HMGB4-202ENST00000458277 MYOM3Q5VTT5 1437 aa6.68□□□□□ -1.34
HMGB4-202ENST00000458277 CYP2C19P33261 490 aa6.68□□□□□ -1.34
HMGB4-202ENST00000458277 SPEM2Q0P670 501 aa6.68□□□□□ -1.34
HMGB4-202ENST00000458277 MTA1Q13330 715 aa6.68□□□□□ -1.34
HMGB4-202ENST00000458277 FKBP5Q13451 457 aaPredicted RBP6.68□□□□□ -1.34
HMGB4-202ENST00000458277 OXLD1Q5BKU9 147 aa6.68□□□□□ -1.34
HMGB4-202ENST00000458277 PRR23CQ6ZRP0 262 aa6.68□□□□□ -1.34
HMGB4-202ENST00000458277 NUDT8Q8WV74 236 aa6.68□□□□□ -1.34
HMGB4-202ENST00000458277 ERCC4Q92889 916 aaPredicted RBP6.68□□□□□ -1.34
HMGB4-202ENST00000458277 TBC1D32Q96NH3 1257 aa6.68□□□□□ -1.34
HMGB4-202ENST00000458277 TMX4Q9H1E5 349 aaPredicted RBP6.68□□□□□ -1.34
HMGB4-202ENST00000458277 SPTLC3Q9NUV7 552 aa6.68□□□□□ -1.34
HMGB4-202ENST00000458277 ANAPC4Q9UJX5 808 aa6.68□□□□□ -1.34
HMGB4-202ENST00000458277 SUFUQ9UMX1 484 aa6.68□□□□□ -1.34
HMGB4-202ENST00000458277 USP3Q9Y6I4 520 aa6.68□□□□□ -1.34
HMGB4-202ENST00000458277 KANK1Q14678 1352 aa6.68□□□□□ -1.34
HMGB4-202ENST00000458277 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.68□□□□□ -1.34
HMGB4-202ENST00000458277 NCOA1Q15788 1441 aa6.67□□□□□ -1.34
HMGB4-202ENST00000458277 YEATS2Q9ULM3 1422 aa6.67□□□□□ -1.34
HMGB4-202ENST00000458277 IVLP07476 585 aa6.67□□□□□ -1.34
HMGB4-202ENST00000458277 ATP2B1P20020 1258 aa6.67□□□□□ -1.34
HMGB4-202ENST00000458277 NOS3P29474 1203 aa6.67□□□□□ -1.34
HMGB4-202ENST00000458277 RAD51AP2Q09MP3 1159 aa6.67□□□□□ -1.34
HMGB4-202ENST00000458277 BMS1Q14692 1282 aaKnown RBP6.67□□□□□ -1.34
HMGB4-202ENST00000458277 SLFNL1Q499Z3 407 aa6.67□□□□□ -1.34
HMGB4-202ENST00000458277 TTC31Q49AM3 519 aaPredicted RBP6.67□□□□□ -1.34
HMGB4-202ENST00000458277 JAKMIP3Q5VZ66 844 aa6.67□□□□□ -1.34
HMGB4-202ENST00000458277 FMNL3Q8IVF7 1028 aa6.67□□□□□ -1.34
HMGB4-202ENST00000458277 DMRTC2Q8IXT2 367 aaPredicted RBP6.67□□□□□ -1.34
HMGB4-202ENST00000458277 ZNF295-AS1Q8N0V1 137 aa6.67□□□□□ -1.34
HMGB4-202ENST00000458277 ANKRD20A12PQ8NF67 263 aa6.67□□□□□ -1.34
HMGB4-202ENST00000458277 PPM1EQ8WY54 764 aa6.67□□□□□ -1.34
HMGB4-202ENST00000458277 SNX21Q969T3 373 aa6.67□□□□□ -1.34
HMGB4-202ENST00000458277 SYAP1Q96A49 352 aaPredicted RBP6.67□□□□□ -1.34
HMGB4-202ENST00000458277 FAM117AQ9C073 453 aa6.67□□□□□ -1.34
HMGB4-202ENST00000458277 PRDM16Q9HAZ2 1276 aa6.67□□□□□ -1.34
HMGB4-202ENST00000458277 BRD4O60885 1362 aaPredicted RBP6.67□□□□□ -1.34
HMGB4-202ENST00000458277 CARMIL1Q5VZK9 1371 aa6.67□□□□□ -1.34
HMGB4-202ENST00000458277 FSTP19883 344 aa6.66□□□□□ -1.34
HMGB4-202ENST00000458277 MAP2K2P36507 400 aa6.66□□□□□ -1.34
HMGB4-202ENST00000458277 TXLNAP40222 546 aa6.66□□□□□ -1.34
HMGB4-202ENST00000458277 NOLC1Q14978 699 aaKnown RBP eCLIP6.66□□□□□ -1.34
HMGB4-202ENST00000458277 ZRSR1Q15695 479 aaKnown RBP6.66□□□□□ -1.34
HMGB4-202ENST00000458277 TMEM259Q4ZIN3 620 aa6.66□□□□□ -1.34
HMGB4-202ENST00000458277 TSHZ1Q6ZSZ6 1077 aa6.66□□□□□ -1.34
HMGB4-202ENST00000458277 ANKRD23Q86SG2 305 aa6.66□□□□□ -1.34
HMGB4-202ENST00000458277 MEGF10Q96KG7 1140 aa6.66□□□□□ -1.34
HMGB4-202ENST00000458277 NOL10Q9BSC4 688 aaKnown RBP6.66□□□□□ -1.34
HMGB4-202ENST00000458277 HIRIP3Q9BW71 556 aaPredicted RBP6.66□□□□□ -1.34
HMGB4-202ENST00000458277 NEUROD4Q9HD90 331 aa6.66□□□□□ -1.34
HMGB4-202ENST00000458277 CTNNA3Q9UI47 895 aa6.66□□□□□ -1.34
HMGB4-202ENST00000458277 CCDC7Q96M83 1385 aa6.66□□□□□ -1.34
HMGB4-202ENST00000458277 MAGI1Q96QZ7 1491 aaPredicted RBP6.66□□□□□ -1.34
HMGB4-202ENST00000458277 PES1O00541 588 aaKnown RBP6.65□□□□□ -1.34
HMGB4-202ENST00000458277 CCP110O43303 1012 aa6.65□□□□□ -1.34
HMGB4-202ENST00000458277 ATP8B1O43520 1251 aa6.65□□□□□ -1.34
HMGB4-202ENST00000458277 MED26O95402 600 aa6.65□□□□□ -1.34
HMGB4-202ENST00000458277 U2AF2P26368 475 aaKnown RBP eCLIP6.65□□□□□ -1.34
HMGB4-202ENST00000458277 MAGEA9P43362 315 aa6.65□□□□□ -1.34
HMGB4-202ENST00000458277 JAG1P78504 1218 aa6.65□□□□□ -1.34
HMGB4-202ENST00000458277 C11orf91Q3C1V1 193 aa6.65□□□□□ -1.34
HMGB4-202ENST00000458277 MCTP2Q6DN12 878 aa6.65□□□□□ -1.34
HMGB4-202ENST00000458277 SMC5Q8IY18 1101 aa6.65□□□□□ -1.34
HMGB4-202ENST00000458277 ZNF397Q8NF99 534 aaPredicted RBP6.65□□□□□ -1.34
HMGB4-202ENST00000458277 TEX13AQ9BXU3 409 aaPredicted RBP6.65□□□□□ -1.34
HMGB4-202ENST00000458277 IGFLR1Q9H665 355 aa6.65□□□□□ -1.34
HMGB4-202ENST00000458277 IQSEC3Q9UPP2 1182 aaPredicted RBP6.65□□□□□ -1.34
HMGB4-202ENST00000458277 DDX49Q9Y6V7 483 aaKnown RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms