RNA–Protein interactions for RNA: ENST00000455551.6

SEMA4D-213, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 3,594 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-213ENST00000455551 TRMT112Q9UI30 125 aaKnown RBP14.34□□□□□ -0.11
SEMA4D-213ENST00000455551 RRP9O43818 475 aaKnown RBP14.34□□□□□ -0.11
SEMA4D-213ENST00000455551 ME1P48163 572 aa14.34□□□□□ -0.11
SEMA4D-213ENST00000455551 ILDR1Q86SU0 546 aaPredicted RBP14.34□□□□□ -0.11
SEMA4D-213ENST00000455551 HELBQ8NG08 1087 aaPredicted RBP14.34□□□□□ -0.11
SEMA4D-213ENST00000455551 ERCC4Q92889 916 aaPredicted RBP14.34□□□□□ -0.11
SEMA4D-213ENST00000455551 FBXW7Q969H0 707 aa14.34□□□□□ -0.11
SEMA4D-213ENST00000455551 TEX13AQ9BXU3 409 aaPredicted RBP14.34□□□□□ -0.11
SEMA4D-213ENST00000455551 FAM177BA6PVY3 158 aa14.34□□□□□ -0.11
SEMA4D-213ENST00000455551 IRS4O14654 1257 aaPredicted RBP14.34□□□□□ -0.11
SEMA4D-213ENST00000455551 IDH1O75874 414 aaKnown RBP14.34□□□□□ -0.11
SEMA4D-213ENST00000455551 ZFYP08048 801 aaPredicted RBP14.34□□□□□ -0.11
SEMA4D-213ENST00000455551 PTGS1P23219 599 aa14.34□□□□□ -0.11
SEMA4D-213ENST00000455551 TERF1P54274 439 aa14.34□□□□□ -0.11
SEMA4D-213ENST00000455551 RALYLQ86SE5 291 aaKnown RBP14.34□□□□□ -0.11
SEMA4D-213ENST00000455551 TRIM5Q9C035 493 aa14.34□□□□□ -0.11
SEMA4D-213ENST00000455551 RIPOR2Q9Y4F9 1068 aa14.34□□□□□ -0.11
SEMA4D-213ENST00000455551 RBM43Q6ZSC3 357 aaKnown RBP14.33□□□□□ -0.11
SEMA4D-213ENST00000455551 PLA2G12BQ9BX93 195 aa14.33□□□□□ -0.11
SEMA4D-213ENST00000455551 ANKRD18BA2A2Z9 1011 aa14.33□□□□□ -0.12
SEMA4D-213ENST00000455551 CTSWP56202 376 aa14.33□□□□□ -0.12
SEMA4D-213ENST00000455551 ABCA3Q99758 1704 aa14.33□□□□□ -0.12
SEMA4D-213ENST00000455551 APPP05067 770 aa14.33□□□□□ -0.12
SEMA4D-213ENST00000455551 POLR3DP05423 398 aaPredicted RBP14.33□□□□□ -0.12
SEMA4D-213ENST00000455551 ANTXR2P58335 489 aa14.33□□□□□ -0.12
SEMA4D-213ENST00000455551 SLC9C2Q5TAH2 1124 aa14.33□□□□□ -0.12
SEMA4D-213ENST00000455551 CCDC73Q6ZRK6 1079 aa14.33□□□□□ -0.12
SEMA4D-213ENST00000455551 VSIG10Q8N0Z9 540 aa14.33□□□□□ -0.12
SEMA4D-213ENST00000455551 RCOR1Q9UKL0 485 aa14.33□□□□□ -0.12
SEMA4D-213ENST00000455551 NWD2Q9ULI1 1742 aa14.32□□□□□ -0.12
SEMA4D-213ENST00000455551 ZNF213O14771 459 aa14.32□□□□□ -0.12
SEMA4D-213ENST00000455551 MB21D2Q8IYB1 491 aaPredicted RBP14.32□□□□□ -0.12
SEMA4D-213ENST00000455551 ZNF396Q96N95 335 aaPredicted RBP14.32□□□□□ -0.12
SEMA4D-213ENST00000455551 FBXO3Q9UK99 471 aa14.32□□□□□ -0.12
SEMA4D-213ENST00000455551 SPEF2Q9C093 1822 aa14.32□□□□□ -0.12
SEMA4D-213ENST00000455551 C11orf57Q6ZUT1 292 aaPredicted RBP14.32□□□□□ -0.12
SEMA4D-213ENST00000455551 FSIP1Q8NA03 581 aa14.32□□□□□ -0.12
SEMA4D-213ENST00000455551 NRBP1Q9UHY1 535 aa14.32□□□□□ -0.12
SEMA4D-213ENST00000455551 GOLGA6L6A8MZA4 724 aa14.32□□□□□ -0.12
SEMA4D-213ENST00000455551 KLHL34Q8N239 644 aa14.32□□□□□ -0.12
SEMA4D-213ENST00000455551 NCOA7Q8NI08 942 aa14.32□□□□□ -0.12
SEMA4D-213ENST00000455551 NKX2-3Q8TAU0 364 aa14.32□□□□□ -0.12
SEMA4D-213ENST00000455551 PIH1D3Q9NQM4 214 aaKnown RBP14.32□□□□□ -0.12
SEMA4D-213ENST00000455551 SNAP23O00161 211 aa14.31□□□□□ -0.12
SEMA4D-213ENST00000455551 CPLX1O14810 134 aa14.31□□□□□ -0.12
SEMA4D-213ENST00000455551 CYP19A1P11511 503 aaPredicted RBP14.31□□□□□ -0.12
SEMA4D-213ENST00000455551 RXRAP19793 462 aa14.31□□□□□ -0.12
SEMA4D-213ENST00000455551 PHKA1P46020 1223 aa14.31□□□□□ -0.12
SEMA4D-213ENST00000455551 C8orf76Q96K31 380 aa14.31□□□□□ -0.12
SEMA4D-213ENST00000455551 ORC3Q9UBD5 711 aaPredicted RBP14.31□□□□□ -0.12
SEMA4D-213ENST00000455551 CCDC186Q7Z3E2 898 aa14.31□□□□□ -0.12
SEMA4D-213ENST00000455551 TSC1Q92574 1164 aa14.31□□□□□ -0.12
SEMA4D-213ENST00000455551 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.31□□□□□ -0.12
SEMA4D-213ENST00000455551 KINO60870 393 aaKnown RBP14.31□□□□□ -0.12
SEMA4D-213ENST00000455551 TICAM2Q86XR7 235 aa14.31□□□□□ -0.12
SEMA4D-213ENST00000455551 HPS5Q9UPZ3 1129 aa14.31□□□□□ -0.12
SEMA4D-213ENST00000455551 LRMPQ12912 555 aa14.3□□□□□ -0.12
SEMA4D-213ENST00000455551 ADD2P35612 726 aa14.3□□□□□ -0.12
SEMA4D-213ENST00000455551 ZNF75DP51815 510 aa14.3□□□□□ -0.12
SEMA4D-213ENST00000455551 SNW1Q13573 536 aaKnown RBP14.3□□□□□ -0.12
SEMA4D-213ENST00000455551 DZIP3Q86Y13 1208 aaKnown RBP14.3□□□□□ -0.12
SEMA4D-213ENST00000455551 TDRD7Q8NHU6 1098 aaKnown RBP14.3□□□□□ -0.12
SEMA4D-213ENST00000455551 CDHR2Q9BYE9 1310 aa14.3□□□□□ -0.12
SEMA4D-213ENST00000455551 MYH15Q9Y2K3 1946 aa14.3□□□□□ -0.12
SEMA4D-213ENST00000455551 TBC1D10CQ8IV04 446 aa14.29□□□□□ -0.12
SEMA4D-213ENST00000455551 KIAA1524Q8TCG1 905 aa14.29□□□□□ -0.12
SEMA4D-213ENST00000455551 NBPF3Q9H094 633 aa14.29□□□□□ -0.12
SEMA4D-213ENST00000455551 WWC3Q9ULE0 1092 aa14.29□□□□□ -0.12
SEMA4D-213ENST00000455551 PCDHA7Q9UN72 937 aa14.29□□□□□ -0.12
SEMA4D-213ENST00000455551 CLIC4Q9Y696 253 aa14.29□□□□□ -0.12
SEMA4D-213ENST00000455551 A0A1B0GVL5 298 aa14.29□□□□□ -0.12
SEMA4D-213ENST00000455551 CCDC102BQ68D86 513 aa14.29□□□□□ -0.12
SEMA4D-213ENST00000455551 CCDC144CPQ8IYA2 1237 aa14.29□□□□□ -0.12
SEMA4D-213ENST00000455551 UBN2Q6ZU65 1347 aa14.29□□□□□ -0.12
SEMA4D-213ENST00000455551 ZNF532Q9HCE3 1301 aa14.29□□□□□ -0.12
SEMA4D-213ENST00000455551 STK38Q15208 465 aa14.29□□□□□ -0.12
SEMA4D-213ENST00000455551 SF3A1Q15459 793 aaKnown RBP14.29□□□□□ -0.12
SEMA4D-213ENST00000455551 ITGB4P16144 1822 aa14.28□□□□□ -0.12
SEMA4D-213ENST00000455551 MYO5AQ9Y4I1 1855 aaKnown RBP14.28□□□□□ -0.12
SEMA4D-213ENST00000455551 GOLGA6L19H0YKK7 550 aa14.28□□□□□ -0.12
SEMA4D-213ENST00000455551 PDE8BO95263 885 aa14.28□□□□□ -0.12
SEMA4D-213ENST00000455551 FAM160A1Q05DH4 1040 aa14.28□□□□□ -0.12
SEMA4D-213ENST00000455551 TRDNQ13061 729 aa14.28□□□□□ -0.12
SEMA4D-213ENST00000455551 VGLL2Q8N8G2 317 aa14.28□□□□□ -0.12
SEMA4D-213ENST00000455551 AIFM3Q96NN9 605 aa14.28□□□□□ -0.12
SEMA4D-213ENST00000455551 INCENPQ9NQS7 918 aa14.28□□□□□ -0.12
SEMA4D-213ENST00000455551 SPTLC3Q9NUV7 552 aa14.28□□□□□ -0.12
SEMA4D-213ENST00000455551 EVCP57679 992 aa14.28□□□□□ -0.12
SEMA4D-213ENST00000455551 CYB5R4Q7L1T6 521 aa14.28□□□□□ -0.12
SEMA4D-213ENST00000455551 SENP2Q9HC62 589 aa14.28□□□□□ -0.12
SEMA4D-213ENST00000455551 MYH7P12883 1935 aa14.27□□□□□ -0.12
SEMA4D-213ENST00000455551 AKAP11Q9UKA4 1901 aa14.27□□□□□ -0.12
SEMA4D-213ENST00000455551 B4E1Z4 1266 aa14.27□□□□□ -0.12
SEMA4D-213ENST00000455551 KIF28PB7ZC32 967 aa14.27□□□□□ -0.12
SEMA4D-213ENST00000455551 DHX16O60231 1041 aaKnown RBP14.27□□□□□ -0.12
SEMA4D-213ENST00000455551 PDE8AO60658 829 aa14.27□□□□□ -0.12
SEMA4D-213ENST00000455551 TPM3P06753 285 aa14.27□□□□□ -0.12
SEMA4D-213ENST00000455551 PDE6AP16499 860 aa14.27□□□□□ -0.12
SEMA4D-213ENST00000455551 STX1AQ16623 288 aa14.27□□□□□ -0.12
SEMA4D-213ENST00000455551 PLA2G4DQ86XP0 818 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms