RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 ILDR2Q71H61 639 aa9.9□□□□□ -0.82
MCF2L2-203ENST00000447025 TMC6Q7Z403 805 aa9.9□□□□□ -0.82
MCF2L2-203ENST00000447025 REXO1L1PQ8IX06 675 aa9.9□□□□□ -0.82
MCF2L2-203ENST00000447025 NGDNQ8NEJ9 315 aaKnown RBP9.9□□□□□ -0.82
MCF2L2-203ENST00000447025 GTF3C6Q969F1 213 aa9.9□□□□□ -0.82
MCF2L2-203ENST00000447025 RBM33Q96EV2 1170 aaKnown RBP9.9□□□□□ -0.82
MCF2L2-203ENST00000447025 RUFY1Q96T51 708 aa9.9□□□□□ -0.82
MCF2L2-203ENST00000447025 CD248Q9HCU0 757 aa9.9□□□□□ -0.82
MCF2L2-203ENST00000447025 ARIH1Q9Y4X5 557 aaPredicted RBP9.9□□□□□ -0.82
MCF2L2-203ENST00000447025 TMEM221A6NGB7 291 aa9.9□□□□□ -0.82
MCF2L2-203ENST00000447025 GOLGA6L10A6NI86 522 aa9.9□□□□□ -0.82
MCF2L2-203ENST00000447025 NPHP1O15259 732 aa9.9□□□□□ -0.82
MCF2L2-203ENST00000447025 ERLIN2O94905 339 aa9.9□□□□□ -0.82
MCF2L2-203ENST00000447025 TMEM62Q0P6H9 643 aa9.9□□□□□ -0.82
MCF2L2-203ENST00000447025 KIAA1524Q8TCG1 905 aa9.9□□□□□ -0.82
MCF2L2-203ENST00000447025 CLIP3Q96DZ5 547 aa9.9□□□□□ -0.82
MCF2L2-203ENST00000447025 RBM41Q96IZ5 413 aaKnown RBP9.9□□□□□ -0.82
MCF2L2-203ENST00000447025 IWS1Q96ST2 819 aa9.9□□□□□ -0.82
MCF2L2-203ENST00000447025 PDRG1Q9NUG6 133 aa9.9□□□□□ -0.82
MCF2L2-203ENST00000447025 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.9□□□□□ -0.82
MCF2L2-203ENST00000447025 UHRF1BP1LA0JNW5 1464 aa9.9□□□□□ -0.82
MCF2L2-203ENST00000447025 ATP8B1O43520 1251 aa9.89□□□□□ -0.83
MCF2L2-203ENST00000447025 ZNF131P52739 623 aa9.89□□□□□ -0.83
MCF2L2-203ENST00000447025 CCBE1Q6UXH8 406 aaPredicted RBP9.89□□□□□ -0.83
MCF2L2-203ENST00000447025 CEP57L1Q8IYX8 460 aa9.89□□□□□ -0.83
MCF2L2-203ENST00000447025 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.89□□□□□ -0.83
MCF2L2-203ENST00000447025 CCDC150Q8NCX0 1101 aa9.89□□□□□ -0.83
MCF2L2-203ENST00000447025 KAT2BQ92831 832 aa9.89□□□□□ -0.83
MCF2L2-203ENST00000447025 PARD6BQ9BYG5 372 aa9.89□□□□□ -0.83
MCF2L2-203ENST00000447025 TBKBP1A7MCY6 615 aa9.89□□□□□ -0.83
MCF2L2-203ENST00000447025 TCF3P15923 654 aa9.89□□□□□ -0.83
MCF2L2-203ENST00000447025 MATR3P43243 847 aaKnown RBP eCLIP9.89□□□□□ -0.83
MCF2L2-203ENST00000447025 GCLCP48506 637 aaPredicted RBP9.89□□□□□ -0.83
MCF2L2-203ENST00000447025 CLCN2P51788 898 aa9.89□□□□□ -0.83
MCF2L2-203ENST00000447025 CLNS1AP54105 237 aaKnown RBP9.89□□□□□ -0.83
MCF2L2-203ENST00000447025 ZCCHC8Q6NZY4 707 aaKnown RBP9.89□□□□□ -0.83
MCF2L2-203ENST00000447025 KRT77Q7Z794 578 aa9.89□□□□□ -0.83
MCF2L2-203ENST00000447025 HOOK3Q86VS8 718 aa9.89□□□□□ -0.83
MCF2L2-203ENST00000447025 IQCA1Q86XH1 822 aa9.89□□□□□ -0.83
MCF2L2-203ENST00000447025 NDUFAF2Q8N183 169 aa9.89□□□□□ -0.83
MCF2L2-203ENST00000447025 GOLGA1Q92805 767 aa9.89□□□□□ -0.83
MCF2L2-203ENST00000447025 HPS3Q969F9 1004 aa9.89□□□□□ -0.83
MCF2L2-203ENST00000447025 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.89□□□□□ -0.83
MCF2L2-203ENST00000447025 BATF3Q9NR55 127 aa9.89□□□□□ -0.83
MCF2L2-203ENST00000447025 ATP1B4Q9UN42 357 aaPredicted RBP9.89□□□□□ -0.83
MCF2L2-203ENST00000447025 M0R2C6 588 aa9.88□□□□□ -0.83
MCF2L2-203ENST00000447025 PNMA6AP0CW24 399 aaPredicted RBP9.88□□□□□ -0.83
MCF2L2-203ENST00000447025 SCNN1BP51168 640 aa9.88□□□□□ -0.83
MCF2L2-203ENST00000447025 CTAG1AP78358 180 aa9.88□□□□□ -0.83
MCF2L2-203ENST00000447025 BTG3Q14201 252 aaPredicted RBP9.88□□□□□ -0.83
MCF2L2-203ENST00000447025 CNGA3Q16281 694 aa9.88□□□□□ -0.83
MCF2L2-203ENST00000447025 ZSCAN23Q3MJ62 389 aa9.88□□□□□ -0.83
MCF2L2-203ENST00000447025 ALDH1L2Q3SY69 923 aa9.88□□□□□ -0.83
MCF2L2-203ENST00000447025 PLEKHO1Q53GL0 409 aaPredicted RBP9.88□□□□□ -0.83
MCF2L2-203ENST00000447025 ATF7IPQ6VMQ6 1270 aa9.88□□□□□ -0.83
MCF2L2-203ENST00000447025 RNF168Q8IYW5 571 aaPredicted RBP9.88□□□□□ -0.83
MCF2L2-203ENST00000447025 MAB21L3Q8N8X9 362 aa9.88□□□□□ -0.83
MCF2L2-203ENST00000447025 DTNBP1Q96EV8 351 aa9.88□□□□□ -0.83
MCF2L2-203ENST00000447025 ACAD8Q9UKU7 415 aa9.88□□□□□ -0.83
MCF2L2-203ENST00000447025 SHROOM2Q13796 1616 aa9.88□□□□□ -0.83
MCF2L2-203ENST00000447025 DISP3Q9P2K9 1392 aa9.88□□□□□ -0.83
MCF2L2-203ENST00000447025 ENO4A6NNW6 628 aa9.88□□□□□ -0.83
MCF2L2-203ENST00000447025 KIAA0754O94854 1291 aa9.88□□□□□ -0.83
MCF2L2-203ENST00000447025 HOXD11P31277 338 aaPredicted RBP9.88□□□□□ -0.83
MCF2L2-203ENST00000447025 NEK2P51955 445 aa9.88□□□□□ -0.83
MCF2L2-203ENST00000447025 RAB3GAP1Q15042 981 aa9.88□□□□□ -0.83
MCF2L2-203ENST00000447025 CCDC152Q4G0S7 254 aa9.88□□□□□ -0.83
MCF2L2-203ENST00000447025 SPDYCQ5MJ68 293 aa9.88□□□□□ -0.83
MCF2L2-203ENST00000447025 MSL1Q68DK7 614 aa9.88□□□□□ -0.83
MCF2L2-203ENST00000447025 ISM2Q6H9L7 571 aa9.88□□□□□ -0.83
MCF2L2-203ENST00000447025 CCDC146Q8IYE0 955 aa9.88□□□□□ -0.83
MCF2L2-203ENST00000447025 KIAA1958Q8N8K9 716 aa9.88□□□□□ -0.83
MCF2L2-203ENST00000447025 CUL5Q93034 780 aa9.88□□□□□ -0.83
MCF2L2-203ENST00000447025 ZKSCAN4Q969J2 545 aaPredicted RBP9.88□□□□□ -0.83
MCF2L2-203ENST00000447025 OSBPL9Q96SU4 736 aa9.88□□□□□ -0.83
MCF2L2-203ENST00000447025 MAP3K14Q99558 947 aa9.88□□□□□ -0.83
MCF2L2-203ENST00000447025 TAOK3Q9H2K8 898 aa9.88□□□□□ -0.83
MCF2L2-203ENST00000447025 DCAF16Q9NXF7 216 aa9.88□□□□□ -0.83
MCF2L2-203ENST00000447025 TUBA8Q9NY65 449 aaPredicted RBP9.88□□□□□ -0.83
MCF2L2-203ENST00000447025 CROTQ9UKG9 612 aa9.88□□□□□ -0.83
MCF2L2-203ENST00000447025 CFAP45Q9UL16 551 aa9.88□□□□□ -0.83
MCF2L2-203ENST00000447025 MBD4O95243 580 aa9.87□□□□□ -0.83
MCF2L2-203ENST00000447025 H2AFXP16104 143 aaPredicted RBP9.87□□□□□ -0.83
MCF2L2-203ENST00000447025 RRM1P23921 792 aa9.87□□□□□ -0.83
MCF2L2-203ENST00000447025 ERCC5P28715 1186 aaPredicted RBP9.87□□□□□ -0.83
MCF2L2-203ENST00000447025 EMC10Q5UCC4 262 aa9.87□□□□□ -0.83
MCF2L2-203ENST00000447025 EFCAB2Q5VUJ9 269 aa9.87□□□□□ -0.83
MCF2L2-203ENST00000447025 HS6ST3Q8IZP7 471 aa9.87□□□□□ -0.83
MCF2L2-203ENST00000447025 CCDC112Q8NEF3 446 aa9.87□□□□□ -0.83
MCF2L2-203ENST00000447025 BICD2Q8TD16 824 aa9.87□□□□□ -0.83
MCF2L2-203ENST00000447025 SH3TC2Q8TF17 1288 aa9.87□□□□□ -0.83
MCF2L2-203ENST00000447025 TBC1D32Q96NH3 1257 aa9.87□□□□□ -0.83
MCF2L2-203ENST00000447025 UTP14AQ9BVJ6 771 aaKnown RBP9.87□□□□□ -0.83
MCF2L2-203ENST00000447025 SLC45A1Q9Y2W3 748 aa9.87□□□□□ -0.83
MCF2L2-203ENST00000447025 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.87□□□□□ -0.83
MCF2L2-203ENST00000447025 SBNO2Q9Y2G9 1366 aa9.87□□□□□ -0.83
MCF2L2-203ENST00000447025 CTTNBP2Q8WZ74 1663 aa9.87□□□□□ -0.83
MCF2L2-203ENST00000447025 ABL1P00519 1130 aa9.87□□□□□ -0.83
MCF2L2-203ENST00000447025 INHBCP55103 352 aa9.87□□□□□ -0.83
MCF2L2-203ENST00000447025 ROR2Q01974 943 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms