RNA–Protein interactions for RNA: ENST00000409687.4

SAPCD2-201, Transcript of suppressor APC domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAPCD2, Length 3,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAPCD2-201ENST00000409687 MAPK8IP1Q9UQF2 711 aa17.34■□□□□ 0.37
SAPCD2-201ENST00000409687 NDUFA8P51970 172 aa17.34■□□□□ 0.37
SAPCD2-201ENST00000409687 PTPN12Q05209 780 aaKnown RBP17.34■□□□□ 0.37
SAPCD2-201ENST00000409687 FILIP1LQ4L180 1135 aa17.34■□□□□ 0.37
SAPCD2-201ENST00000409687 ARHGAP29Q52LW3 1261 aa17.34■□□□□ 0.37
SAPCD2-201ENST00000409687 DNAJC10Q8IXB1 793 aa17.34■□□□□ 0.37
SAPCD2-201ENST00000409687 CAGE1Q8TC20 777 aa17.34■□□□□ 0.37
SAPCD2-201ENST00000409687 COL3A1P02461 1466 aaPredicted RBP17.33■□□□□ 0.37
SAPCD2-201ENST00000409687 NRXN1Q9ULB1 1477 aa17.33■□□□□ 0.37
SAPCD2-201ENST00000409687 COBLO75128 1261 aa17.33■□□□□ 0.37
SAPCD2-201ENST00000409687 CTDSPL2Q05D32 466 aa17.33■□□□□ 0.37
SAPCD2-201ENST00000409687 KCNG4Q8TDN1 519 aa17.33■□□□□ 0.37
SAPCD2-201ENST00000409687 PLIN2Q99541 437 aa17.33■□□□□ 0.37
SAPCD2-201ENST00000409687 TRIM34Q9BYJ4 488 aa17.33■□□□□ 0.37
SAPCD2-201ENST00000409687 ZNF202O95125 648 aa17.33■□□□□ 0.36
SAPCD2-201ENST00000409687 KIF4BQ2VIQ3 1234 aa17.33■□□□□ 0.36
SAPCD2-201ENST00000409687 MFSD6Q6ZSS7 791 aa17.33■□□□□ 0.36
SAPCD2-201ENST00000409687 RPAP1Q9BWH6 1393 aaPredicted RBP17.33■□□□□ 0.36
SAPCD2-201ENST00000409687 ENOX2Q16206 610 aaKnown RBP17.33■□□□□ 0.36
SAPCD2-201ENST00000409687 INCENPQ9NQS7 918 aa17.33■□□□□ 0.36
SAPCD2-201ENST00000409687 PCDHA7Q9UN72 937 aa17.33■□□□□ 0.36
SAPCD2-201ENST00000409687 PLBD2Q8NHP8 589 aa17.32■□□□□ 0.36
SAPCD2-201ENST00000409687 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.32■□□□□ 0.36
SAPCD2-201ENST00000409687 CBFA2T2O43439 604 aa17.32■□□□□ 0.36
SAPCD2-201ENST00000409687 FGAP02671 866 aa17.32■□□□□ 0.36
SAPCD2-201ENST00000409687 PHKG2P15735 406 aa17.32■□□□□ 0.36
SAPCD2-201ENST00000409687 DPCR1Q3MIW9 517 aa17.32■□□□□ 0.36
SAPCD2-201ENST00000409687 ADCY9O60503 1353 aa17.32■□□□□ 0.36
SAPCD2-201ENST00000409687 ARHGEF25Q86VW2 580 aa17.32■□□□□ 0.36
SAPCD2-201ENST00000409687 ARMT1Q9H993 441 aa17.32■□□□□ 0.36
SAPCD2-201ENST00000409687 PAXBP1Q9Y5B6 917 aa17.32■□□□□ 0.36
SAPCD2-201ENST00000409687 SLC4A4Q9Y6R1 1079 aa17.32■□□□□ 0.36
SAPCD2-201ENST00000409687 PNOCQ13519 176 aa17.31■□□□□ 0.36
SAPCD2-201ENST00000409687 NOC3LQ8WTT2 800 aaKnown RBP17.31■□□□□ 0.36
SAPCD2-201ENST00000409687 CCDC12Q8WUD4 166 aaPredicted RBP17.31■□□□□ 0.36
SAPCD2-201ENST00000409687 SIRT1Q96EB6 747 aa17.31■□□□□ 0.36
SAPCD2-201ENST00000409687 EEF2KMTQ96G04 330 aa17.31■□□□□ 0.36
SAPCD2-201ENST00000409687 ARHGAP31Q2M1Z3 1444 aa17.31■□□□□ 0.36
SAPCD2-201ENST00000409687 CFAP74Q9C0B2 1584 aa17.31■□□□□ 0.36
SAPCD2-201ENST00000409687 MBD4O95243 580 aa17.31■□□□□ 0.36
SAPCD2-201ENST00000409687 IGHMBP2P38935 993 aaKnown RBP17.31■□□□□ 0.36
SAPCD2-201ENST00000409687 GSDMDP57764 484 aa17.31■□□□□ 0.36
SAPCD2-201ENST00000409687 BABAM1Q9NWV8 329 aa17.31■□□□□ 0.36
SAPCD2-201ENST00000409687 MAP2P11137 1827 aaKnown RBP17.31■□□□□ 0.36
SAPCD2-201ENST00000409687 ITGA6P23229 1130 aa17.31■□□□□ 0.36
SAPCD2-201ENST00000409687 PDIA3P30101 505 aaKnown RBP17.3■□□□□ 0.36
SAPCD2-201ENST00000409687 NSUN7Q8NE18 718 aaKnown RBP17.3■□□□□ 0.36
SAPCD2-201ENST00000409687 SMARCE1Q969G3 411 aa17.3■□□□□ 0.36
SAPCD2-201ENST00000409687 G3V3G9 751 aa17.3■□□□□ 0.36
SAPCD2-201ENST00000409687 IRS4O14654 1257 aaPredicted RBP17.3■□□□□ 0.36
SAPCD2-201ENST00000409687 SSBP05455 408 aaKnown RBP eCLIP17.3■□□□□ 0.36
SAPCD2-201ENST00000409687 ERCC3P19447 782 aa17.3■□□□□ 0.36
SAPCD2-201ENST00000409687 HSP90B2PQ58FF3 399 aa17.3■□□□□ 0.36
SAPCD2-201ENST00000409687 DCAF8Q5TAQ9 597 aa17.3■□□□□ 0.36
SAPCD2-201ENST00000409687 ANO1Q5XXA6 986 aa17.3■□□□□ 0.36
SAPCD2-201ENST00000409687 CCDC102AQ96A19 550 aa17.3■□□□□ 0.36
SAPCD2-201ENST00000409687 ZHX3Q9H4I2 956 aa17.3■□□□□ 0.36
SAPCD2-201ENST00000409687 EPB41L2O43491 1005 aaKnown RBP17.3■□□□□ 0.36
SAPCD2-201ENST00000409687 SLU7O95391 586 aaKnown RBP17.3■□□□□ 0.36
SAPCD2-201ENST00000409687 ERCC6LQ2NKX8 1250 aa17.3■□□□□ 0.36
SAPCD2-201ENST00000409687 CCDC144BQ3MJ40 725 aa17.3■□□□□ 0.36
SAPCD2-201ENST00000409687 PUF60Q9UHX1 559 aaKnown RBP17.3■□□□□ 0.36
SAPCD2-201ENST00000409687 ABCA9Q8IUA7 1624 aa17.3■□□□□ 0.36
SAPCD2-201ENST00000409687 ZC3H13Q5T200 1668 aaKnown RBP17.29■□□□□ 0.36
SAPCD2-201ENST00000409687 CASQ1P31415 396 aa17.29■□□□□ 0.36
SAPCD2-201ENST00000409687 OSBP2Q969R2 916 aa17.29■□□□□ 0.36
SAPCD2-201ENST00000409687 VAT1LQ9HCJ6 419 aa17.29■□□□□ 0.36
SAPCD2-201ENST00000409687 MCM6Q14566 821 aa17.29■□□□□ 0.36
SAPCD2-201ENST00000409687 WTAPQ15007 396 aa17.29■□□□□ 0.36
SAPCD2-201ENST00000409687 LONRF3Q496Y0 759 aa17.29■□□□□ 0.36
SAPCD2-201ENST00000409687 CABP5Q9NP86 173 aa17.29■□□□□ 0.36
SAPCD2-201ENST00000409687 ARAP3Q8WWN8 1544 aa17.29■□□□□ 0.36
SAPCD2-201ENST00000409687 PIK3C2BO00750 1634 aa17.29■□□□□ 0.36
SAPCD2-201ENST00000409687 PHACTR2O75167 634 aa17.28■□□□□ 0.36
SAPCD2-201ENST00000409687 CYP7A1P22680 504 aa17.28■□□□□ 0.36
SAPCD2-201ENST00000409687 GPS2Q13227 327 aa17.28■□□□□ 0.36
SAPCD2-201ENST00000409687 HAUS7Q99871 368 aa17.28■□□□□ 0.36
SAPCD2-201ENST00000409687 USP27XA6NNY8 438 aa17.28■□□□□ 0.36
SAPCD2-201ENST00000409687 M0R2C6 588 aa17.28■□□□□ 0.36
SAPCD2-201ENST00000409687 AP5Z1O43299 807 aa17.28■□□□□ 0.36
SAPCD2-201ENST00000409687 C19orf44Q9H6X5 657 aa17.28■□□□□ 0.36
SAPCD2-201ENST00000409687 POLR2DO15514 142 aaKnown RBP17.28■□□□□ 0.36
SAPCD2-201ENST00000409687 FANCCQ00597 558 aa17.28■□□□□ 0.36
SAPCD2-201ENST00000409687 KCNF1Q9H3M0 494 aa17.28■□□□□ 0.36
SAPCD2-201ENST00000409687 RTN1Q16799 776 aa17.27■□□□□ 0.36
SAPCD2-201ENST00000409687 KRT40Q6A162 431 aa17.27■□□□□ 0.36
SAPCD2-201ENST00000409687 NUP88Q99567 741 aaPredicted RBP17.27■□□□□ 0.36
SAPCD2-201ENST00000409687 DESI2Q9BSY9 194 aa17.27■□□□□ 0.36
SAPCD2-201ENST00000409687 MAST3O60307 1309 aa17.27■□□□□ 0.36
SAPCD2-201ENST00000409687 MYSM1Q5VVJ2 828 aa17.27■□□□□ 0.36
SAPCD2-201ENST00000409687 LRRC8AQ8IWT6 810 aa17.27■□□□□ 0.36
SAPCD2-201ENST00000409687 DHX37Q8IY37 1157 aaKnown RBP17.27■□□□□ 0.36
SAPCD2-201ENST00000409687 NOL10Q9BSC4 688 aaKnown RBP17.27■□□□□ 0.36
SAPCD2-201ENST00000409687 COPRSQ9NQ92 184 aa17.27■□□□□ 0.36
SAPCD2-201ENST00000409687 NEMFO60524 1076 aa17.27■□□□□ 0.35
SAPCD2-201ENST00000409687 SLC5A1P13866 664 aa17.27■□□□□ 0.35
SAPCD2-201ENST00000409687 CCT6AP40227 531 aaKnown RBP17.27■□□□□ 0.35
SAPCD2-201ENST00000409687 ADKP55263 362 aaKnown RBP17.27■□□□□ 0.35
SAPCD2-201ENST00000409687 HELLSQ9NRZ9 838 aa17.27■□□□□ 0.35
SAPCD2-201ENST00000409687 ATP1A3P13637 1013 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms