RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 FAM181BA6NEQ2 426 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 EREGO14944 169 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 TLR3O15455 904 aaKnown RBP2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 LILRA1O75019 489 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 PPFIA4O75335 1185 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 ALDH1L1O75891 902 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 PF4P02776 101 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 VIL1P09327 827 aaKnown RBP2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 LMNB1P20700 586 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 GNALP38405 381 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 IDH3AP50213 366 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 FCGRTP55899 365 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 PPP2R5EQ16537 467 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 FXNQ16595 210 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 HIF1AQ16665 826 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 FOXD4L6Q3SYB3 417 aaPredicted RBP2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 LONRF3Q496Y0 759 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 C4orf46Q504U0 113 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 SEZ6Q53EL9 994 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 DALRD3Q5D0E6 543 aaKnown RBP2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 ZFYVE27Q5T4F4 411 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 C1orf53Q5VUE5 145 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 WWC2Q6AWC2 1192 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 PDE12Q6L8Q7 609 aaKnown RBP2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 TMEM214Q6NUQ4 689 aaKnown RBP2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 PRPF40BQ6NWY9 871 aaKnown RBP2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 POTEAQ6S8J7 498 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 XKR5Q6UX68 686 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 FOXD4L3Q6VB84 417 aaPredicted RBP2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 TPTE2Q6XPS3 522 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 TEX2Q8IWB9 1127 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 EHBP1Q8NDI1 1231 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 RHPN1Q8TCX5 695 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 RELTQ969Z4 430 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 NLRP3Q96P20 1036 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 OXCT2Q9BYC2 517 aaPredicted RBP2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 NIFKQ9BYG3 293 aaKnown RBP2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 EHD4Q9H223 541 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 ELP3Q9H9T3 547 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 TMEM63CQ9P1W3 806 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 MCM8Q9UJA3 840 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 PNMA2Q9UL42 364 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 TRAK1Q9UPV9 953 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 PLAAQ9Y263 795 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 BCS1LQ9Y276 419 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 PTCH2Q9Y6C5 1203 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 CCDC189A1A4V9 331 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 ALG1L2C9J202 215 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 TGFBR3LH3BV60 316 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 MEN1O00255 615 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 IRS4O14654 1257 aaPredicted RBP2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 TSPAN6O43657 245 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 DIAPH1O60610 1272 aaKnown RBP2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 WDHD1O75717 1129 aaPredicted RBP2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 DDAH1O94760 285 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 LDHAP00338 332 aaKnown RBP2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 MYCLP1P12525 358 aaPredicted RBP2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 ATF3P18847 181 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 ADD1P35611 737 aaKnown RBP2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 TXLNAP40222 546 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 GSK3AP49840 483 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 LIG3P49916 1009 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 ARSDP51689 593 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 EPHB1P54762 984 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 NFKB2Q00653 900 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 CENPCQ03188 943 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 SSRP1Q08945 709 aaKnown RBP2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 CAMK2GQ13555 558 aaPredicted RBP2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 GRIN2CQ14957 1233 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 SUZ12Q15022 739 aaKnown RBP2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 ZRSR2Q15696 482 aaKnown RBP2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 SYCP2LQ5T4T6 812 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 PPP1R26Q5T8A7 1209 aaPredicted RBP2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 NBPF10Q6P3W6 841 aaKnown RBP2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 DTHD1Q6ZMT9 781 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 SV2BQ7L1I2 683 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 C11orf96Q7Z7L8 435 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 DDX42Q86XP3 938 aaKnown RBP eCLIP2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 NIM1KQ8IY84 436 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 CCDC116Q8IYX3 515 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 SYNPOQ8N3V7 929 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 FAM169BQ8N8A8 192 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 C1orf127Q8N9H9 656 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 PHC3Q8NDX5 983 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 ATL2Q8NHH9 583 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 AIDAQ96BJ3 306 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 MFSD3Q96ES6 412 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 RHOVQ96L33 236 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 ZSCAN10Q96SZ4 725 aaPredicted RBP2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 FAM126AQ9BYI3 521 aaPredicted RBP2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 CAAP1Q9H8G2 361 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 PGPEP1Q9NXJ5 209 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 TLL2Q9Y6L7 1015 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 WASF2Q9Y6W5 498 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 A0A0U1RQG5 324 aaPredicted RBP2.74□□□□□ -1.97
HMGN2P39-201ENST00000398005 SOBPA7XYQ1 873 aa2.74□□□□□ -1.97
HMGN2P39-201ENST00000398005 GREM1O60565 184 aa2.74□□□□□ -1.97
HMGN2P39-201ENST00000398005 RASGRP1O95267 797 aa2.74□□□□□ -1.97
HMGN2P39-201ENST00000398005 GJB6O95452 261 aa2.74□□□□□ -1.97
HMGN2P39-201ENST00000398005 MYL1P05976 194 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms