RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 FAM181BA6NEQ2 426 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 EREGO14944 169 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 TLR3O15455 904 aaKnown RBP2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 LILRA1O75019 489 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 PPFIA4O75335 1185 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 ALDH1L1O75891 902 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 PF4P02776 101 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 VIL1P09327 827 aaKnown RBP2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 LMNB1P20700 586 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 GNALP38405 381 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 IDH3AP50213 366 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 FCGRTP55899 365 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 PPP2R5EQ16537 467 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 FXNQ16595 210 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 HIF1AQ16665 826 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 FOXD4L6Q3SYB3 417 aaPredicted RBP2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 LONRF3Q496Y0 759 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 C4orf46Q504U0 113 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 SEZ6Q53EL9 994 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 DALRD3Q5D0E6 543 aaKnown RBP2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 ZFYVE27Q5T4F4 411 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 C1orf53Q5VUE5 145 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 WWC2Q6AWC2 1192 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 PDE12Q6L8Q7 609 aaKnown RBP2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 TMEM214Q6NUQ4 689 aaKnown RBP2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 PRPF40BQ6NWY9 871 aaKnown RBP2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 POTEAQ6S8J7 498 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 XKR5Q6UX68 686 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 FOXD4L3Q6VB84 417 aaPredicted RBP2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 TPTE2Q6XPS3 522 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 TEX2Q8IWB9 1127 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 EHBP1Q8NDI1 1231 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 RHPN1Q8TCX5 695 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 RELTQ969Z4 430 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 NLRP3Q96P20 1036 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 OXCT2Q9BYC2 517 aaPredicted RBP2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 NIFKQ9BYG3 293 aaKnown RBP2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 EHD4Q9H223 541 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 ELP3Q9H9T3 547 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 TMEM63CQ9P1W3 806 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 MCM8Q9UJA3 840 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 PNMA2Q9UL42 364 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 TRAK1Q9UPV9 953 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 PLAAQ9Y263 795 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 BCS1LQ9Y276 419 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 PTCH2Q9Y6C5 1203 aa2.76□□□□□ -1.97
HMGN2P39-201ENST00000398005 CCDC189A1A4V9 331 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 ALG1L2C9J202 215 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 TGFBR3LH3BV60 316 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 MEN1O00255 615 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 IRS4O14654 1257 aaPredicted RBP2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 TSPAN6O43657 245 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 DIAPH1O60610 1272 aaKnown RBP2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 WDHD1O75717 1129 aaPredicted RBP2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 DDAH1O94760 285 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 LDHAP00338 332 aaKnown RBP2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 MYCLP1P12525 358 aaPredicted RBP2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 ATF3P18847 181 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 ADD1P35611 737 aaKnown RBP2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 TXLNAP40222 546 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 GSK3AP49840 483 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 LIG3P49916 1009 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 ARSDP51689 593 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 EPHB1P54762 984 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 NFKB2Q00653 900 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 CENPCQ03188 943 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 SSRP1Q08945 709 aaKnown RBP2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 CAMK2GQ13555 558 aaPredicted RBP2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 GRIN2CQ14957 1233 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 SUZ12Q15022 739 aaKnown RBP2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 ZRSR2Q15696 482 aaKnown RBP2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 SYCP2LQ5T4T6 812 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 PPP1R26Q5T8A7 1209 aaPredicted RBP2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 NBPF10Q6P3W6 841 aaKnown RBP2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 DTHD1Q6ZMT9 781 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 SV2BQ7L1I2 683 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 C11orf96Q7Z7L8 435 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 DDX42Q86XP3 938 aaKnown RBP eCLIP2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 NIM1KQ8IY84 436 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 CCDC116Q8IYX3 515 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 SYNPOQ8N3V7 929 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 FAM169BQ8N8A8 192 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 C1orf127Q8N9H9 656 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 PHC3Q8NDX5 983 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 ATL2Q8NHH9 583 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 AIDAQ96BJ3 306 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 MFSD3Q96ES6 412 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 RHOVQ96L33 236 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 ZSCAN10Q96SZ4 725 aaPredicted RBP2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 FAM126AQ9BYI3 521 aaPredicted RBP2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 CAAP1Q9H8G2 361 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 PGPEP1Q9NXJ5 209 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 TLL2Q9Y6L7 1015 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 WASF2Q9Y6W5 498 aa2.75□□□□□ -1.97
HMGN2P39-201ENST00000398005 A0A0U1RQG5 324 aaPredicted RBP2.74□□□□□ -1.97
HMGN2P39-201ENST00000398005 SOBPA7XYQ1 873 aa2.74□□□□□ -1.97
HMGN2P39-201ENST00000398005 GREM1O60565 184 aa2.74□□□□□ -1.97
HMGN2P39-201ENST00000398005 RASGRP1O95267 797 aa2.74□□□□□ -1.97
HMGN2P39-201ENST00000398005 GJB6O95452 261 aa2.74□□□□□ -1.97
HMGN2P39-201ENST00000398005 MYL1P05976 194 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms