RNA–Protein interactions for RNA: ENST00000395065.7

NXF3-201, Transcript of nuclear RNA export factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF3, Length 1,938 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-201ENST00000395065 FANCCQ00597 558 aa7.31□□□□□ -1.24
NXF3-201ENST00000395065 SCRN1Q12765 414 aa7.31□□□□□ -1.24
NXF3-201ENST00000395065 LONRF2Q1L5Z9 754 aa7.31□□□□□ -1.24
NXF3-201ENST00000395065 FSIP1Q8NA03 581 aa7.31□□□□□ -1.24
NXF3-201ENST00000395065 NSUN7Q8NE18 718 aaKnown RBP7.31□□□□□ -1.24
NXF3-201ENST00000395065 MRPS27Q92552 414 aaKnown RBP7.31□□□□□ -1.24
NXF3-201ENST00000395065 NEK1Q96PY6 1258 aa7.31□□□□□ -1.24
NXF3-201ENST00000395065 AGXT2Q9BYV1 514 aa7.31□□□□□ -1.24
NXF3-201ENST00000395065 EPC1Q9H2F5 836 aa7.31□□□□□ -1.24
NXF3-201ENST00000395065 PCDHA7Q9UN72 937 aa7.31□□□□□ -1.24
NXF3-201ENST00000395065 USP54Q70EL1 1684 aa7.31□□□□□ -1.24
NXF3-201ENST00000395065 SALL1Q9NSC2 1324 aa7.3□□□□□ -1.24
NXF3-201ENST00000395065 MYO1BO43795 1136 aa7.3□□□□□ -1.24
NXF3-201ENST00000395065 CTDNEP1O95476 244 aa7.3□□□□□ -1.24
NXF3-201ENST00000395065 CPP00450 1065 aa7.3□□□□□ -1.24
NXF3-201ENST00000395065 TXLNAP40222 546 aa7.3□□□□□ -1.24
NXF3-201ENST00000395065 LMAN1P49257 510 aa7.3□□□□□ -1.24
NXF3-201ENST00000395065 AMPHP49418 695 aa7.3□□□□□ -1.24
NXF3-201ENST00000395065 PIP4K2BP78356 416 aa7.3□□□□□ -1.24
NXF3-201ENST00000395065 PPP2R3AQ06190 1150 aa7.3□□□□□ -1.24
NXF3-201ENST00000395065 APOBRQ0VD83 1088 aa7.3□□□□□ -1.24
NXF3-201ENST00000395065 TAF7Q15545 349 aaPredicted RBP7.3□□□□□ -1.24
NXF3-201ENST00000395065 NOM1Q5C9Z4 860 aaKnown RBP7.3□□□□□ -1.24
NXF3-201ENST00000395065 BEND6Q5SZJ8 279 aaPredicted RBP7.3□□□□□ -1.24
NXF3-201ENST00000395065 C14orf37Q86TY3 774 aa7.3□□□□□ -1.24
NXF3-201ENST00000395065 KIFC2Q96AC6 838 aa7.3□□□□□ -1.24
NXF3-201ENST00000395065 CCDC34Q96HJ3 373 aa7.3□□□□□ -1.24
NXF3-201ENST00000395065 EYA1Q99502 592 aa7.3□□□□□ -1.24
NXF3-201ENST00000395065 NCAPGQ9BPX3 1015 aa7.3□□□□□ -1.24
NXF3-201ENST00000395065 UTP14AQ9BVJ6 771 aaKnown RBP7.3□□□□□ -1.24
NXF3-201ENST00000395065 FTOQ9C0B1 505 aaKnown RBP eCLIP7.3□□□□□ -1.24
NXF3-201ENST00000395065 RTEL1Q9NZ71 1219 aa7.3□□□□□ -1.24
NXF3-201ENST00000395065 RAB21Q9UL25 225 aa7.3□□□□□ -1.24
NXF3-201ENST00000395065 TBX22Q9Y458 520 aa7.3□□□□□ -1.24
NXF3-201ENST00000395065 JRKLQ9Y4A0 524 aa7.3□□□□□ -1.24
NXF3-201ENST00000395065 NWD1Q149M9 1564 aa7.3□□□□□ -1.24
NXF3-201ENST00000395065 NCAPD2Q15021 1401 aa7.3□□□□□ -1.24
NXF3-201ENST00000395065 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.29□□□□□ -1.24
NXF3-201ENST00000395065 GNAT3A8MTJ3 354 aa7.29□□□□□ -1.24
NXF3-201ENST00000395065 HOXB7P09629 217 aa7.29□□□□□ -1.24
NXF3-201ENST00000395065 CORO7P57737 925 aa7.29□□□□□ -1.24
NXF3-201ENST00000395065 CEBPZQ03701 1054 aaKnown RBP7.29□□□□□ -1.24
NXF3-201ENST00000395065 HDGFL1Q5TGJ6 251 aa7.29□□□□□ -1.24
NXF3-201ENST00000395065 LEKR1Q6ZMV7 388 aa7.29□□□□□ -1.24
NXF3-201ENST00000395065 Q6ZUG5 572 aa7.29□□□□□ -1.24
NXF3-201ENST00000395065 ZNF589Q86UQ0 364 aaPredicted RBP7.29□□□□□ -1.24
NXF3-201ENST00000395065 PACS2Q86VP3 889 aa7.29□□□□□ -1.24
NXF3-201ENST00000395065 VSTM4Q8IW00 320 aa7.29□□□□□ -1.24
NXF3-201ENST00000395065 SUGP1Q8IWZ8 645 aaKnown RBP7.29□□□□□ -1.24
NXF3-201ENST00000395065 IL17REQ8NFR9 667 aa7.29□□□□□ -1.24
NXF3-201ENST00000395065 DNAAF4Q8WXU2 420 aa7.29□□□□□ -1.24
NXF3-201ENST00000395065 NECTIN2Q92692 538 aa7.29□□□□□ -1.24
NXF3-201ENST00000395065 GOLGA1Q92805 767 aa7.29□□□□□ -1.24
NXF3-201ENST00000395065 ERCC4Q92889 916 aaPredicted RBP7.29□□□□□ -1.24
NXF3-201ENST00000395065 ZFP91Q96JP5 570 aaPredicted RBP7.29□□□□□ -1.24
NXF3-201ENST00000395065 SDF4Q9BRK5 362 aa7.29□□□□□ -1.24
NXF3-201ENST00000395065 MKRN1Q9UHC7 482 aaKnown RBP7.29□□□□□ -1.24
NXF3-201ENST00000395065 PPP2R2CQ9Y2T4 447 aa7.29□□□□□ -1.24
NXF3-201ENST00000395065 EIF3CLB5ME19 914 aaKnown RBP7.29□□□□□ -1.24
NXF3-201ENST00000395065 CBFA2T2O43439 604 aa7.29□□□□□ -1.24
NXF3-201ENST00000395065 SASH1O94885 1247 aa7.29□□□□□ -1.24
NXF3-201ENST00000395065 ME1P48163 572 aa7.29□□□□□ -1.24
NXF3-201ENST00000395065 NDUFA8P51970 172 aa7.29□□□□□ -1.24
NXF3-201ENST00000395065 NLRP6P59044 892 aa7.29□□□□□ -1.24
NXF3-201ENST00000395065 TUBB4BP68371 445 aa7.29□□□□□ -1.24
NXF3-201ENST00000395065 TBX2Q13207 712 aaPredicted RBP7.29□□□□□ -1.24
NXF3-201ENST00000395065 SWT1Q5T5J6 900 aaKnown RBP7.29□□□□□ -1.24
NXF3-201ENST00000395065 LINC00301Q8NCQ3 95 aa7.29□□□□□ -1.24
NXF3-201ENST00000395065 MSANTD4Q8NCY6 345 aa7.29□□□□□ -1.24
NXF3-201ENST00000395065 EAF2Q96CJ1 260 aaPredicted RBP7.29□□□□□ -1.24
NXF3-201ENST00000395065 WDR24Q96S15 920 aa7.29□□□□□ -1.24
NXF3-201ENST00000395065 EIF3CQ99613 913 aaKnown RBP7.29□□□□□ -1.24
NXF3-201ENST00000395065 TUBE1Q9UJT0 475 aa7.29□□□□□ -1.24
NXF3-201ENST00000395065 L1RE1Q9UN81 338 aa7.29□□□□□ -1.24
NXF3-201ENST00000395065 COL15A1P39059 1388 aa7.28□□□□□ -1.24
NXF3-201ENST00000395065 RGPD2P0DJD1 1756 aa7.28□□□□□ -1.24
NXF3-201ENST00000395065 MED1Q15648 1581 aaPredicted RBP7.28□□□□□ -1.24
NXF3-201ENST00000395065 A0A1B0GVL5 298 aa7.28□□□□□ -1.24
NXF3-201ENST00000395065 STX10O60499 249 aa7.28□□□□□ -1.24
NXF3-201ENST00000395065 YEATS4O95619 227 aa7.28□□□□□ -1.24
NXF3-201ENST00000395065 KCNA6P17658 529 aa7.28□□□□□ -1.24
NXF3-201ENST00000395065 ATP2B1P20020 1258 aa7.28□□□□□ -1.24
NXF3-201ENST00000395065 UBASH3AP57075 661 aa7.28□□□□□ -1.24
NXF3-201ENST00000395065 OS9Q13438 667 aaPredicted RBP7.28□□□□□ -1.24
NXF3-201ENST00000395065 TTC31Q49AM3 519 aaPredicted RBP7.28□□□□□ -1.24
NXF3-201ENST00000395065 HDXQ7Z353 690 aa7.28□□□□□ -1.24
NXF3-201ENST00000395065 AACSQ86V21 672 aa7.28□□□□□ -1.24
NXF3-201ENST00000395065 RFX7Q2KHR2 1363 aa7.28□□□□□ -1.24
NXF3-201ENST00000395065 PI4KAP2A4QPH2 592 aa7.27□□□□□ -1.25
NXF3-201ENST00000395065 POTEB2H3BUK9 544 aa7.27□□□□□ -1.25
NXF3-201ENST00000395065 SLC3A2P08195 630 aaKnown RBP7.27□□□□□ -1.25
NXF3-201ENST00000395065 CYP21A2P08686 494 aa7.27□□□□□ -1.25
NXF3-201ENST00000395065 HMGB1P09429 215 aaKnown RBP7.27□□□□□ -1.25
NXF3-201ENST00000395065 ATP1A3P13637 1013 aa7.27□□□□□ -1.25
NXF3-201ENST00000395065 PSEN1P49768 467 aa7.27□□□□□ -1.25
NXF3-201ENST00000395065 NBPF6Q5VWK0 638 aa7.27□□□□□ -1.25
NXF3-201ENST00000395065 THEMISQ8N1K5 641 aaPredicted RBP7.27□□□□□ -1.25
NXF3-201ENST00000395065 PI4KAP1Q8N8J0 262 aa7.27□□□□□ -1.25
NXF3-201ENST00000395065 KCNG4Q8TDN1 519 aa7.27□□□□□ -1.25
NXF3-201ENST00000395065 PPM1EQ8WY54 764 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms