RNA–Protein interactions for RNA: ENST00000332772.4

SIMC1-201, Transcript of SUMO interacting motifs containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIMC1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-201ENST00000332772 RGS22Q8NE09 1264 aa10.72□□□□□ -0.69
SIMC1-201ENST00000332772 DDX49Q9Y6V7 483 aaKnown RBP10.72□□□□□ -0.69
SIMC1-201ENST00000332772 C4AP0C0L4 1744 aa10.72□□□□□ -0.69
SIMC1-201ENST00000332772 CARMIL3Q8ND23 1372 aa10.72□□□□□ -0.69
SIMC1-201ENST00000332772 ZNF804BA4D1E1 1349 aa10.72□□□□□ -0.69
SIMC1-201ENST00000332772 PDS5AQ29RF7 1337 aaKnown RBP10.72□□□□□ -0.69
SIMC1-201ENST00000332772 GOLGA6L3A6NEY3 463 aa10.72□□□□□ -0.69
SIMC1-201ENST00000332772 C19orf67A6NJJ6 358 aa10.72□□□□□ -0.69
SIMC1-201ENST00000332772 M0R2C6 588 aa10.72□□□□□ -0.69
SIMC1-201ENST00000332772 SYT1P21579 422 aa10.72□□□□□ -0.69
SIMC1-201ENST00000332772 HSPA1LP34931 641 aa10.72□□□□□ -0.69
SIMC1-201ENST00000332772 PHKA1P46020 1223 aa10.72□□□□□ -0.69
SIMC1-201ENST00000332772 MAP3K12Q12852 859 aa10.72□□□□□ -0.69
SIMC1-201ENST00000332772 WASHC4Q2M389 1173 aa10.72□□□□□ -0.69
SIMC1-201ENST00000332772 CCDC83Q8IWF9 413 aa10.72□□□□□ -0.69
SIMC1-201ENST00000332772 SPATA5Q8NB90 893 aa10.72□□□□□ -0.69
SIMC1-201ENST00000332772 SPDYE1Q8NFV5 336 aaPredicted RBP10.72□□□□□ -0.69
SIMC1-201ENST00000332772 SEC31BQ9NQW1 1179 aa10.72□□□□□ -0.69
SIMC1-201ENST00000332772 E7EWF7 191 aa10.71□□□□□ -0.69
SIMC1-201ENST00000332772 SEMA3EO15041 775 aa10.71□□□□□ -0.69
SIMC1-201ENST00000332772 LARGE1O95461 756 aa10.71□□□□□ -0.69
SIMC1-201ENST00000332772 GJB2P29033 226 aa10.71□□□□□ -0.69
SIMC1-201ENST00000332772 CHRNDQ07001 517 aa10.71□□□□□ -0.69
SIMC1-201ENST00000332772 ERFEQ4G0M1 354 aa10.71□□□□□ -0.69
SIMC1-201ENST00000332772 SLC27A3Q5K4L6 730 aa10.71□□□□□ -0.69
SIMC1-201ENST00000332772 SLC9C2Q5TAH2 1124 aa10.71□□□□□ -0.69
SIMC1-201ENST00000332772 SEPT12Q8IYM1 358 aa10.71□□□□□ -0.69
SIMC1-201ENST00000332772 ZNF274Q96GC6 653 aaPredicted RBP10.71□□□□□ -0.69
SIMC1-201ENST00000332772 NLRP3Q96P20 1036 aa10.71□□□□□ -0.69
SIMC1-201ENST00000332772 GNL3LQ9NVN8 582 aaKnown RBP10.71□□□□□ -0.69
SIMC1-201ENST00000332772 TCRBV5S4A2TA0A5A2 114 aa10.7□□□□□ -0.7
SIMC1-201ENST00000332772 GNPATO15228 680 aa10.7□□□□□ -0.7
SIMC1-201ENST00000332772 GPAA1O43292 621 aa10.7□□□□□ -0.7
SIMC1-201ENST00000332772 PFKFB2O60825 505 aa10.7□□□□□ -0.7
SIMC1-201ENST00000332772 F13A1P00488 732 aa10.7□□□□□ -0.7
SIMC1-201ENST00000332772 GNAT2P19087 354 aa10.7□□□□□ -0.7
SIMC1-201ENST00000332772 MRE11P49959 708 aa10.7□□□□□ -0.7
SIMC1-201ENST00000332772 TBC1D9BQ66K14 1250 aa10.7□□□□□ -0.7
SIMC1-201ENST00000332772 FAM196AQ6ZSG2 479 aa10.7□□□□□ -0.7
SIMC1-201ENST00000332772 Q6ZUG5 572 aa10.7□□□□□ -0.7
SIMC1-201ENST00000332772 GTF3C6Q969F1 213 aa10.7□□□□□ -0.7
SIMC1-201ENST00000332772 ANKRD2Q9GZV1 360 aa10.7□□□□□ -0.7
SIMC1-201ENST00000332772 KIF3AQ9Y496 699 aa10.7□□□□□ -0.7
SIMC1-201ENST00000332772 MYO5AQ9Y4I1 1855 aaKnown RBP10.7□□□□□ -0.7
SIMC1-201ENST00000332772 FGAP02671 866 aa10.7□□□□□ -0.7
SIMC1-201ENST00000332772 PDE6AP16499 860 aa10.7□□□□□ -0.7
SIMC1-201ENST00000332772 GTF2E1P29083 439 aaPredicted RBP10.7□□□□□ -0.7
SIMC1-201ENST00000332772 ZNF445P59923 1031 aa10.7□□□□□ -0.7
SIMC1-201ENST00000332772 ST3GAL1Q11201 340 aa10.7□□□□□ -0.7
SIMC1-201ENST00000332772 TRAPPC3LQ5T215 181 aa10.7□□□□□ -0.7
SIMC1-201ENST00000332772 STOX1Q6ZVD7 989 aa10.7□□□□□ -0.7
SIMC1-201ENST00000332772 PUS7LQ9H0K6 701 aaKnown RBP10.7□□□□□ -0.7
SIMC1-201ENST00000332772 PIH1D3Q9NQM4 214 aaKnown RBP10.7□□□□□ -0.7
SIMC1-201ENST00000332772 TAF6LQ9Y6J9 622 aa10.7□□□□□ -0.7
SIMC1-201ENST00000332772 PNPLA7Q6ZV29 1317 aa10.69□□□□□ -0.7
SIMC1-201ENST00000332772 UBR3Q6ZT12 1888 aa10.69□□□□□ -0.7
SIMC1-201ENST00000332772 FAM177BA6PVY3 158 aa10.69□□□□□ -0.7
SIMC1-201ENST00000332772 FOXP2O15409 715 aa10.69□□□□□ -0.7
SIMC1-201ENST00000332772 CHGBP05060 677 aa10.69□□□□□ -0.7
SIMC1-201ENST00000332772 NCLP19338 710 aaKnown RBP10.69□□□□□ -0.7
SIMC1-201ENST00000332772 HMGN5P82970 282 aaKnown RBP10.69□□□□□ -0.7
SIMC1-201ENST00000332772 RASGRF1Q13972 1273 aa10.69□□□□□ -0.7
SIMC1-201ENST00000332772 NBPF5PQ86XG9 351 aaPredicted RBP10.69□□□□□ -0.7
SIMC1-201ENST00000332772 ARHGEF1Q92888 912 aaKnown RBP10.69□□□□□ -0.7
SIMC1-201ENST00000332772 MTMR6Q9Y217 621 aa10.69□□□□□ -0.7
SIMC1-201ENST00000332772 ZNF213O14771 459 aa10.68□□□□□ -0.7
SIMC1-201ENST00000332772 PRPF40AO75400 957 aaKnown RBP10.68□□□□□ -0.7
SIMC1-201ENST00000332772 RPS8P62241 208 aaKnown RBP10.68□□□□□ -0.7
SIMC1-201ENST00000332772 CAVIN4Q5BKX8 364 aa10.68□□□□□ -0.7
SIMC1-201ENST00000332772 LARP1BQ659C4 914 aaKnown RBP10.68□□□□□ -0.7
SIMC1-201ENST00000332772 PTF1AQ7RTS3 328 aa10.68□□□□□ -0.7
SIMC1-201ENST00000332772 NCOA7Q8NI08 942 aa10.68□□□□□ -0.7
SIMC1-201ENST00000332772 SMARCC2Q8TAQ2 1214 aa10.68□□□□□ -0.7
SIMC1-201ENST00000332772 SYAP1Q96A49 352 aaPredicted RBP10.68□□□□□ -0.7
SIMC1-201ENST00000332772 MTA3Q9BTC8 594 aa10.68□□□□□ -0.7
SIMC1-201ENST00000332772 ZNF532Q9HCE3 1301 aa10.68□□□□□ -0.7
SIMC1-201ENST00000332772 TCHHQ07283 1943 aa10.68□□□□□ -0.7
SIMC1-201ENST00000332772 PATL2C9JE40 543 aaKnown RBP10.68□□□□□ -0.7
SIMC1-201ENST00000332772 IDH1O75874 414 aaKnown RBP10.68□□□□□ -0.7
SIMC1-201ENST00000332772 GABBR2O75899 941 aa10.68□□□□□ -0.7
SIMC1-201ENST00000332772 MCM5P33992 734 aa10.68□□□□□ -0.7
SIMC1-201ENST00000332772 RFC4P35249 363 aa10.68□□□□□ -0.7
SIMC1-201ENST00000332772 FGD1P98174 961 aa10.68□□□□□ -0.7
SIMC1-201ENST00000332772 PI16Q6UXB8 463 aa10.68□□□□□ -0.7
SIMC1-201ENST00000332772 HELBQ8NG08 1087 aaPredicted RBP10.68□□□□□ -0.7
SIMC1-201ENST00000332772 STRBPQ96SI9 672 aaKnown RBP10.68□□□□□ -0.7
SIMC1-201ENST00000332772 QTRT2Q9H974 415 aaKnown RBP10.68□□□□□ -0.7
SIMC1-201ENST00000332772 DENND2AQ9ULE3 1009 aa10.68□□□□□ -0.7
SIMC1-201ENST00000332772 MINPP1Q9UNW1 487 aa10.68□□□□□ -0.7
SIMC1-201ENST00000332772 DHX16O60231 1041 aaKnown RBP10.67□□□□□ -0.7
SIMC1-201ENST00000332772 MB21D2Q8IYB1 491 aaPredicted RBP10.67□□□□□ -0.7
SIMC1-201ENST00000332772 BRF1Q92994 677 aa10.67□□□□□ -0.7
SIMC1-201ENST00000332772 AIDAQ96BJ3 306 aa10.67□□□□□ -0.7
SIMC1-201ENST00000332772 CLEC11AQ9Y240 323 aa10.67□□□□□ -0.7
SIMC1-201ENST00000332772 TIAM2Q8IVF5 1701 aa10.67□□□□□ -0.7
SIMC1-201ENST00000332772 TRDNQ13061 729 aa10.66□□□□□ -0.7
SIMC1-201ENST00000332772 SLFNL1Q499Z3 407 aa10.66□□□□□ -0.7
SIMC1-201ENST00000332772 FBXO33Q7Z6M2 555 aa10.66□□□□□ -0.7
SIMC1-201ENST00000332772 RALYLQ86SE5 291 aaKnown RBP10.66□□□□□ -0.7
SIMC1-201ENST00000332772 NECAB1Q8N987 351 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms