RNA–Protein interactions for RNA: ENST00000328933.9

SYNGR1-203, Transcript of synaptogyrin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR1, Length 4,391 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-203ENST00000328933 TMTC2Q8N394 836 aa16.77■□□□□ 0.27
SYNGR1-203ENST00000328933 SH2D4AQ9H788 454 aa16.77■□□□□ 0.27
SYNGR1-203ENST00000328933 ORC3Q9UBD5 711 aaPredicted RBP16.77■□□□□ 0.27
SYNGR1-203ENST00000328933 NEXMIFQ5QGS0 1516 aa16.77■□□□□ 0.27
SYNGR1-203ENST00000328933 CYP19A1P11511 503 aaPredicted RBP16.76■□□□□ 0.27
SYNGR1-203ENST00000328933 MATR3P43243 847 aaKnown RBP eCLIP16.76■□□□□ 0.27
SYNGR1-203ENST00000328933 USP48Q86UV5 1035 aa16.76■□□□□ 0.27
SYNGR1-203ENST00000328933 PUS3Q9BZE2 481 aaKnown RBP16.76■□□□□ 0.27
SYNGR1-203ENST00000328933 LRRIQ1Q96JM4 1722 aa16.76■□□□□ 0.27
SYNGR1-203ENST00000328933 TCP10L2B9ZVM9 353 aa16.76■□□□□ 0.27
SYNGR1-203ENST00000328933 PPP1R12BO60237 982 aaPredicted RBP16.76■□□□□ 0.27
SYNGR1-203ENST00000328933 OFD1O75665 1012 aa16.76■□□□□ 0.27
SYNGR1-203ENST00000328933 SSFA2P28290 1259 aa16.76■□□□□ 0.27
SYNGR1-203ENST00000328933 TGFBRAP1Q8WUH2 860 aa16.76■□□□□ 0.27
SYNGR1-203ENST00000328933 LIMCH1Q9UPQ0 1083 aa16.76■□□□□ 0.27
SYNGR1-203ENST00000328933 CHST3Q7LGC8 479 aa16.75■□□□□ 0.27
SYNGR1-203ENST00000328933 COL15A1P39059 1388 aa16.75■□□□□ 0.27
SYNGR1-203ENST00000328933 GNAQP50148 359 aa16.75■□□□□ 0.27
SYNGR1-203ENST00000328933 LEMD3Q9Y2U8 911 aa16.75■□□□□ 0.27
SYNGR1-203ENST00000328933 SPATA31D1Q6ZQQ2 1576 aa16.75■□□□□ 0.27
SYNGR1-203ENST00000328933 PDE8BO95263 885 aa16.75■□□□□ 0.27
SYNGR1-203ENST00000328933 PRM3Q9NNZ6 103 aa16.75■□□□□ 0.27
SYNGR1-203ENST00000328933 SH2B1Q9NRF2 756 aaPredicted RBP16.75■□□□□ 0.27
SYNGR1-203ENST00000328933 NCOA3Q9Y6Q9 1424 aa16.74■□□□□ 0.27
SYNGR1-203ENST00000328933 HMGN5P82970 282 aaKnown RBP16.74■□□□□ 0.27
SYNGR1-203ENST00000328933 UBE4AQ14139 1066 aa16.74■□□□□ 0.27
SYNGR1-203ENST00000328933 TBC1D9BQ66K14 1250 aa16.74■□□□□ 0.27
SYNGR1-203ENST00000328933 RTKN2Q8IZC4 609 aa16.74■□□□□ 0.27
SYNGR1-203ENST00000328933 SMCR8Q8TEV9 937 aaPredicted RBP16.74■□□□□ 0.27
SYNGR1-203ENST00000328933 APPBP2Q92624 585 aa16.74■□□□□ 0.27
SYNGR1-203ENST00000328933 PNPLA6Q8IY17 1366 aa16.74■□□□□ 0.27
SYNGR1-203ENST00000328933 CLRN2A0PK11 232 aa16.74■□□□□ 0.27
SYNGR1-203ENST00000328933 PRPF40AO75400 957 aaKnown RBP16.74■□□□□ 0.27
SYNGR1-203ENST00000328933 CCDC102BQ68D86 513 aa16.74■□□□□ 0.27
SYNGR1-203ENST00000328933 IVNS1ABPQ9Y6Y0 642 aa16.74■□□□□ 0.27
SYNGR1-203ENST00000328933 NFIXQ14938 502 aa16.73■□□□□ 0.27
SYNGR1-203ENST00000328933 OTUD7AQ8TE49 926 aaPredicted RBP16.73■□□□□ 0.27
SYNGR1-203ENST00000328933 ZKSCAN3Q9BRR0 538 aa16.73■□□□□ 0.27
SYNGR1-203ENST00000328933 ESYT1Q9BSJ8 1104 aa16.73■□□□□ 0.27
SYNGR1-203ENST00000328933 GPAA1O43292 621 aa16.73■□□□□ 0.27
SYNGR1-203ENST00000328933 RTN1Q16799 776 aa16.73■□□□□ 0.27
SYNGR1-203ENST00000328933 RAB34Q9BZG1 259 aa16.73■□□□□ 0.27
SYNGR1-203ENST00000328933 TANGO6Q9C0B7 1094 aa16.73■□□□□ 0.27
SYNGR1-203ENST00000328933 RNF181Q9P0P0 153 aa16.73■□□□□ 0.27
SYNGR1-203ENST00000328933 ZC3H13Q5T200 1668 aaKnown RBP16.73■□□□□ 0.27
SYNGR1-203ENST00000328933 HEATR3Q7Z4Q2 680 aa16.73■□□□□ 0.27
SYNGR1-203ENST00000328933 ARHGEF10LQ9HCE6 1279 aa16.73■□□□□ 0.27
SYNGR1-203ENST00000328933 CFAP45Q9UL16 551 aa16.73■□□□□ 0.27
SYNGR1-203ENST00000328933 TECPR2O15040 1411 aa16.73■□□□□ 0.27
SYNGR1-203ENST00000328933 PRC1O43663 620 aa16.73■□□□□ 0.27
SYNGR1-203ENST00000328933 PPP4R3AQ6IN85 833 aa16.73■□□□□ 0.27
SYNGR1-203ENST00000328933 CCDC129Q6ZRS4 1044 aa16.73■□□□□ 0.27
SYNGR1-203ENST00000328933 PREX1Q8TCU6 1659 aa16.72■□□□□ 0.27
SYNGR1-203ENST00000328933 SPATA32Q96LK8 384 aa16.72■□□□□ 0.27
SYNGR1-203ENST00000328933 CCDC171Q6TFL3 1326 aa16.72■□□□□ 0.27
SYNGR1-203ENST00000328933 GRAPQ13588 217 aa16.72■□□□□ 0.27
SYNGR1-203ENST00000328933 CIAPIN1Q6FI81 312 aa16.72■□□□□ 0.27
SYNGR1-203ENST00000328933 SMC5Q8IY18 1101 aa16.72■□□□□ 0.27
SYNGR1-203ENST00000328933 GRAPLQ8TC17 118 aaPredicted RBP16.72■□□□□ 0.27
SYNGR1-203ENST00000328933 MST1RQ04912 1400 aa16.72■□□□□ 0.27
SYNGR1-203ENST00000328933 TMEM266Q2M3C6 531 aa16.72■□□□□ 0.27
SYNGR1-203ENST00000328933 SMARCC2Q8TAQ2 1214 aa16.72■□□□□ 0.27
SYNGR1-203ENST00000328933 ZNF532Q9HCE3 1301 aa16.71■□□□□ 0.27
SYNGR1-203ENST00000328933 EDC3Q96F86 508 aaKnown RBP16.71■□□□□ 0.27
SYNGR1-203ENST00000328933 CEP131Q9UPN4 1083 aa16.71■□□□□ 0.27
SYNGR1-203ENST00000328933 DIP2AQ14689 1571 aa16.71■□□□□ 0.27
SYNGR1-203ENST00000328933 CERS3Q8IU89 383 aa16.71■□□□□ 0.27
SYNGR1-203ENST00000328933 KBTBD3Q8NAB2 608 aa16.71■□□□□ 0.27
SYNGR1-203ENST00000328933 B4DLN1 442 aa16.71■□□□□ 0.27
SYNGR1-203ENST00000328933 MRPL12P52815 198 aaKnown RBP16.71■□□□□ 0.27
SYNGR1-203ENST00000328933 PLEKHM2Q8IWE5 1019 aa16.71■□□□□ 0.27
SYNGR1-203ENST00000328933 DCAF15Q66K64 600 aa16.7■□□□□ 0.26
SYNGR1-203ENST00000328933 CKAP2LQ8IYA6 745 aa16.7■□□□□ 0.26
SYNGR1-203ENST00000328933 CPXCR1Q8N123 301 aa16.7■□□□□ 0.26
SYNGR1-203ENST00000328933 BAG4O95429 457 aaKnown RBP16.7■□□□□ 0.26
SYNGR1-203ENST00000328933 CHRNA5P30532 468 aa16.7■□□□□ 0.26
SYNGR1-203ENST00000328933 PHKA1P46020 1223 aa16.7■□□□□ 0.26
SYNGR1-203ENST00000328933 IRX3P78415 501 aaPredicted RBP16.7■□□□□ 0.26
SYNGR1-203ENST00000328933 DCCP43146 1447 aa16.7■□□□□ 0.26
SYNGR1-203ENST00000328933 A0A0G2JLW4 131 aa16.7■□□□□ 0.26
SYNGR1-203ENST00000328933 SLC15A2Q16348 729 aa16.7■□□□□ 0.26
SYNGR1-203ENST00000328933 CT47A1Q5JQC4 288 aaPredicted RBP16.7■□□□□ 0.26
SYNGR1-203ENST00000328933 GPR101Q96P66 508 aaPredicted RBP16.7■□□□□ 0.26
SYNGR1-203ENST00000328933 LIG1P18858 919 aa16.7■□□□□ 0.26
SYNGR1-203ENST00000328933 NAPAP54920 295 aa16.7■□□□□ 0.26
SYNGR1-203ENST00000328933 EAF2Q96CJ1 260 aaPredicted RBP16.7■□□□□ 0.26
SYNGR1-203ENST00000328933 STIM1Q13586 685 aa16.69■□□□□ 0.26
SYNGR1-203ENST00000328933 SYNE4Q8N205 404 aa16.69■□□□□ 0.26
SYNGR1-203ENST00000328933 GPCPD1Q9NPB8 672 aa16.69■□□□□ 0.26
SYNGR1-203ENST00000328933 FRMPD1Q5SYB0 1578 aa16.69■□□□□ 0.26
SYNGR1-203ENST00000328933 BRPF1P55201 1214 aaPredicted RBP16.69■□□□□ 0.26
SYNGR1-203ENST00000328933 ABT1Q9ULW3 272 aaKnown RBP16.69■□□□□ 0.26
SYNGR1-203ENST00000328933 SSH3Q8TE77 659 aa16.68■□□□□ 0.26
SYNGR1-203ENST00000328933 NAT10Q9H0A0 1025 aaKnown RBP16.68■□□□□ 0.26
SYNGR1-203ENST00000328933 NECAB1Q8N987 351 aa16.68■□□□□ 0.26
SYNGR1-203ENST00000328933 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.68■□□□□ 0.26
SYNGR1-203ENST00000328933 NCAPD2Q15021 1401 aa16.68■□□□□ 0.26
SYNGR1-203ENST00000328933 CARMIL3Q8ND23 1372 aa16.67■□□□□ 0.26
SYNGR1-203ENST00000328933 SPDYE3A6NKU9 549 aa16.67■□□□□ 0.26
SYNGR1-203ENST00000328933 B4E1Z4 1266 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms