RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 RABEP2Q9H5N1 569 aa17.7■□□□□ 0.42
UBR3-201ENST00000272793 PLEKHO1Q53GL0 409 aaPredicted RBP17.7■□□□□ 0.42
UBR3-201ENST00000272793 NBPF3Q9H094 633 aa17.7■□□□□ 0.42
UBR3-201ENST00000272793 CNGA4Q8IV77 575 aa17.69■□□□□ 0.42
UBR3-201ENST00000272793 RMDN2Q96LZ7 410 aa17.69■□□□□ 0.42
UBR3-201ENST00000272793 NEK1Q96PY6 1258 aa17.69■□□□□ 0.42
UBR3-201ENST00000272793 SCAPERQ9BY12 1400 aa17.69■□□□□ 0.42
UBR3-201ENST00000272793 INPP5BP32019 993 aa17.69■□□□□ 0.42
UBR3-201ENST00000272793 PYM1Q9BRP8 204 aaKnown RBP17.69■□□□□ 0.42
UBR3-201ENST00000272793 IWS1Q96ST2 819 aa17.69■□□□□ 0.42
UBR3-201ENST00000272793 ZBTB12Q9Y330 459 aaPredicted RBP17.69■□□□□ 0.42
UBR3-201ENST00000272793 AP1ARQ63HQ0 302 aa17.68■□□□□ 0.42
UBR3-201ENST00000272793 HELBQ8NG08 1087 aaPredicted RBP17.68■□□□□ 0.42
UBR3-201ENST00000272793 ITM2BQ9Y287 266 aa17.68■□□□□ 0.42
UBR3-201ENST00000272793 ORC6Q9Y5N6 252 aa17.68■□□□□ 0.42
UBR3-201ENST00000272793 CASP2P42575 452 aa17.68■□□□□ 0.42
UBR3-201ENST00000272793 SEL1L2Q5TEA6 688 aa17.68■□□□□ 0.42
UBR3-201ENST00000272793 LRRC27Q9C0I9 530 aa17.68■□□□□ 0.42
UBR3-201ENST00000272793 SPDYE16A6NNV3 312 aaPredicted RBP17.68■□□□□ 0.42
UBR3-201ENST00000272793 ZSCAN23Q3MJ62 389 aa17.68■□□□□ 0.42
UBR3-201ENST00000272793 SPDYE2Q495Y8 402 aa17.68■□□□□ 0.42
UBR3-201ENST00000272793 RMND1Q9NWS8 449 aa17.68■□□□□ 0.42
UBR3-201ENST00000272793 ESYT2A0FGR8 921 aa17.68■□□□□ 0.42
UBR3-201ENST00000272793 HDXQ7Z353 690 aa17.68■□□□□ 0.42
UBR3-201ENST00000272793 CCDC26Q8TAB7 109 aa17.68■□□□□ 0.42
UBR3-201ENST00000272793 TSGA10Q9BZW7 698 aa17.68■□□□□ 0.42
UBR3-201ENST00000272793 HAUS2Q9NVX0 235 aa17.68■□□□□ 0.42
UBR3-201ENST00000272793 KRT86O43790 486 aa17.68■□□□□ 0.42
UBR3-201ENST00000272793 VSIG1Q86XK7 387 aa17.68■□□□□ 0.42
UBR3-201ENST00000272793 NOLC1Q14978 699 aaKnown RBP eCLIP17.67■□□□□ 0.42
UBR3-201ENST00000272793 RILPL1Q5EBL4 403 aa17.67■□□□□ 0.42
UBR3-201ENST00000272793 SPATS2Q86XZ4 545 aaKnown RBP17.67■□□□□ 0.42
UBR3-201ENST00000272793 FNBP4Q8N3X1 1017 aaPredicted RBP17.67■□□□□ 0.42
UBR3-201ENST00000272793 ARHGAP42A6NI28 874 aa17.67■□□□□ 0.42
UBR3-201ENST00000272793 PNMA8AQ86V59 439 aaPredicted RBP17.67■□□□□ 0.42
UBR3-201ENST00000272793 OLA1Q9NTK5 396 aaKnown RBP17.67■□□□□ 0.42
UBR3-201ENST00000272793 NPR1P16066 1061 aa17.67■□□□□ 0.42
UBR3-201ENST00000272793 SULT6B1Q6IMI4 303 aa17.67■□□□□ 0.42
UBR3-201ENST00000272793 CSRNP2Q9H175 543 aa17.67■□□□□ 0.42
UBR3-201ENST00000272793 ZPR1O75312 459 aa17.67■□□□□ 0.42
UBR3-201ENST00000272793 BCAP29Q9UHQ4 241 aa17.67■□□□□ 0.42
UBR3-201ENST00000272793 GUCA1BQ9UMX6 200 aa17.67■□□□□ 0.42
UBR3-201ENST00000272793 BRD4O60885 1362 aaPredicted RBP17.67■□□□□ 0.42
UBR3-201ENST00000272793 GJB2P29033 226 aa17.67■□□□□ 0.42
UBR3-201ENST00000272793 ATP6V0A1Q93050 837 aa17.67■□□□□ 0.42
UBR3-201ENST00000272793 CFAP70Q5T0N1 1121 aa17.67■□□□□ 0.42
UBR3-201ENST00000272793 AFAP1L1Q8TED9 768 aa17.67■□□□□ 0.42
UBR3-201ENST00000272793 ZBBXA8MT70 800 aa17.66■□□□□ 0.42
UBR3-201ENST00000272793 SKILP12757 684 aa17.66■□□□□ 0.42
UBR3-201ENST00000272793 C4orf50Q6ZRC1 276 aa17.66■□□□□ 0.42
UBR3-201ENST00000272793 MRFAP1L1Q96HT8 127 aa17.66■□□□□ 0.42
UBR3-201ENST00000272793 Q9H521 79 aa17.66■□□□□ 0.42
UBR3-201ENST00000272793 FRMD3A2A2Y4 597 aa17.66■□□□□ 0.42
UBR3-201ENST00000272793 KRT10P13645 584 aa17.66■□□□□ 0.42
UBR3-201ENST00000272793 PALM2Q8IXS6 379 aa17.66■□□□□ 0.42
UBR3-201ENST00000272793 CEP19Q96LK0 163 aa17.66■□□□□ 0.42
UBR3-201ENST00000272793 PPP4R1Q8TF05 950 aa17.66■□□□□ 0.42
UBR3-201ENST00000272793 RASSF2P50749 326 aa17.66■□□□□ 0.42
UBR3-201ENST00000272793 MYO18AQ92614 2054 aaKnown RBP17.66■□□□□ 0.42
UBR3-201ENST00000272793 TRIM60Q495X7 471 aa17.66■□□□□ 0.42
UBR3-201ENST00000272793 ARFGAP2Q8N6H7 521 aa17.66■□□□□ 0.42
UBR3-201ENST00000272793 MGARPQ8TDB4 240 aa17.66■□□□□ 0.42
UBR3-201ENST00000272793 BZW2Q9Y6E2 419 aaKnown RBP17.66■□□□□ 0.42
UBR3-201ENST00000272793 NDUFAB1O14561 156 aa17.65■□□□□ 0.42
UBR3-201ENST00000272793 SERPINB6P35237 376 aa17.65■□□□□ 0.42
UBR3-201ENST00000272793 TEKT2Q9UIF3 430 aa17.65■□□□□ 0.42
UBR3-201ENST00000272793 HMGB1P09429 215 aaKnown RBP17.65■□□□□ 0.42
UBR3-201ENST00000272793 PPP2R1AP30153 589 aa17.65■□□□□ 0.42
UBR3-201ENST00000272793 ANO6Q4KMQ2 910 aa17.65■□□□□ 0.42
UBR3-201ENST00000272793 RASEFQ8IZ41 740 aa17.65■□□□□ 0.42
UBR3-201ENST00000272793 PDE6AP16499 860 aa17.65■□□□□ 0.42
UBR3-201ENST00000272793 FBXW4P57775 412 aa17.65■□□□□ 0.42
UBR3-201ENST00000272793 TOM1L2Q6ZVM7 507 aa17.65■□□□□ 0.42
UBR3-201ENST00000272793 ZNF219Q9P2Y4 722 aaPredicted RBP17.65■□□□□ 0.42
UBR3-201ENST00000272793 H0YC42 278 aa17.65■□□□□ 0.42
UBR3-201ENST00000272793 CALM1P0DP23 149 aa17.65■□□□□ 0.42
UBR3-201ENST00000272793 CALM2P0DP24 149 aa17.65■□□□□ 0.42
UBR3-201ENST00000272793 CALM3P0DP25 149 aa17.65■□□□□ 0.42
UBR3-201ENST00000272793 PPFIA1Q13136 1202 aa17.65■□□□□ 0.42
UBR3-201ENST00000272793 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.65■□□□□ 0.42
UBR3-201ENST00000272793 MAP2K2P36507 400 aa17.65■□□□□ 0.42
UBR3-201ENST00000272793 CCDC102BQ68D86 513 aa17.65■□□□□ 0.42
UBR3-201ENST00000272793 IRAK4Q9NWZ3 460 aa17.65■□□□□ 0.42
UBR3-201ENST00000272793 NEK11Q8NG66 645 aa17.65■□□□□ 0.42
UBR3-201ENST00000272793 LEO1Q8WVC0 666 aaPredicted RBP17.65■□□□□ 0.42
UBR3-201ENST00000272793 SPATA17Q96L03 361 aa17.65■□□□□ 0.42
UBR3-201ENST00000272793 TATP17735 454 aaPredicted RBP17.65■□□□□ 0.42
UBR3-201ENST00000272793 SKA2Q8WVK7 121 aaPredicted RBP17.65■□□□□ 0.42
UBR3-201ENST00000272793 TBC1D2Q9BYX2 928 aa17.64■□□□□ 0.41
UBR3-201ENST00000272793 EFCC1Q9HA90 598 aa17.64■□□□□ 0.41
UBR3-201ENST00000272793 MIS18AQ9NYP9 233 aa17.64■□□□□ 0.41
UBR3-201ENST00000272793 FHOD3Q2V2M9 1422 aa17.64■□□□□ 0.41
UBR3-201ENST00000272793 RNASE9P60153 205 aaKnown RBP17.64■□□□□ 0.41
UBR3-201ENST00000272793 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.64■□□□□ 0.41
UBR3-201ENST00000272793 SLF2Q8IX21 1173 aa17.64■□□□□ 0.41
UBR3-201ENST00000272793 ERMNQ8TAM6 284 aa17.64■□□□□ 0.41
UBR3-201ENST00000272793 NR1H4Q96RI1 486 aaPredicted RBP17.64■□□□□ 0.41
UBR3-201ENST00000272793 LIMCH1Q9UPQ0 1083 aa17.64■□□□□ 0.41
UBR3-201ENST00000272793 GTPBP10A4D1E9 387 aaKnown RBP17.64■□□□□ 0.41
UBR3-201ENST00000272793 BTBD11A6QL63 1104 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms