RNA–Protein interactions for RNA: ENSMUST00000216558.1

Ubp1-206, Transcript of Upstream-binding protein 1, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ubp1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-206ENSMUST00000216558 ErmnQ5EBJ4 281 aa18.54■□□□□ 0.56
Ubp1-206ENSMUST00000216558 Krt40Q6IFX3 439 aa18.54■□□□□ 0.56
Ubp1-206ENSMUST00000216558 Gm21985Q6P6P5 1106 aa18.54■□□□□ 0.56
Ubp1-206ENSMUST00000216558 Rbm15bQ6PHZ5 887 aaKnown RBP18.54■□□□□ 0.56
Ubp1-206ENSMUST00000216558 MthfsQ9D110 203 aa18.54■□□□□ 0.56
Ubp1-206ENSMUST00000216558 Pde3aQ9Z0X4 1141 aa18.54■□□□□ 0.56
Ubp1-206ENSMUST00000216558 FAM186AQ9D9R9 1790 aa18.54■□□□□ 0.56
Ubp1-206ENSMUST00000216558 NfixP70257 488 aa18.53■□□□□ 0.56
Ubp1-206ENSMUST00000216558 Gm5592Q3V0A6 857 aa18.53■□□□□ 0.56
Ubp1-206ENSMUST00000216558 IcoslgQ9JHJ8 322 aa18.53■□□□□ 0.56
Ubp1-206ENSMUST00000216558 Siah1aP61092 282 aa18.52■□□□□ 0.56
Ubp1-206ENSMUST00000216558 Bag4Q8CI61 457 aa18.52■□□□□ 0.56
Ubp1-206ENSMUST00000216558 Myh13B1AR69 1938 aa18.52■□□□□ 0.56
Ubp1-206ENSMUST00000216558 Nup188Q6ZQH8 1759 aa18.52■□□□□ 0.56
Ubp1-206ENSMUST00000216558 Eef2kO08796 724 aa18.52■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Zbtb7aO88939 569 aaKnown RBP18.52■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Pald1P70261 859 aa18.52■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Ppp1r21Q3TDD9 780 aa18.52■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Spty2d1Q68FG3 682 aa18.52■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Ncaph2Q8BSP2 607 aa18.52■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Lmod1Q8BVA4 595 aa18.52■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Gripap1Q8VD04 806 aa18.52■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Cxcl11Q9JHH5 100 aa18.52■□□□□ 0.55
Ubp1-206ENSMUST00000216558 StrcQ8VIM6 1809 aa18.52■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Gnat2P50149 354 aa18.51■□□□□ 0.55
Ubp1-206ENSMUST00000216558 MpndQ3TV65 487 aa18.51■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Msl1Q6PDM1 616 aa18.51■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Ssh1Q76I79 1042 aa18.51■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Ppp1r10Q80W00 888 aaKnown RBP18.51■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Smc3Q9CW03 1217 aaKnown RBP18.51■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Mrpl12Q9DB15 201 aaKnown RBP18.51■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Col4a5Q63ZW6 1691 aa18.5■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Krt24A1L317 512 aa18.49■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Rasa1E9PYG6 1038 aa18.49■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Cyp2d34L7N463 504 aa18.49■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Hand2Q61039 217 aa18.49■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Cyp24a1Q64441 514 aa18.49■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Pcdhb22Q91XZ8 794 aa18.49■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Tbc1d7Q9D0K0 293 aa18.49■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Kif23E9Q5G3 953 aa18.49■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Mapkapk5O54992 473 aa18.49■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Stat1P42225 749 aa18.49■□□□□ 0.55
Ubp1-206ENSMUST00000216558 FanccP50652 591 aa18.49■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Spg7Q3ULF4 781 aa18.49■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Pcsk7Q61139 770 aa18.49■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Best3Q6H1V1 669 aa18.49■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Tex2Q6ZPJ0 1128 aaKnown RBP18.49■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Kcnq3Q8K3F6 873 aa18.49■□□□□ 0.55
Ubp1-206ENSMUST00000216558 BrapQ99MP8 591 aa18.49■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Letm1Q9Z2I0 738 aa18.49■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Zfp804bA0A0G2JGH6 1343 aa18.48■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Ccdc6D3YZP9 469 aa18.48■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Cyp3a59D3Z2W7 503 aa18.48■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Gm29094F6Q785 221 aa18.48■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Casp12O08736 419 aa18.48■□□□□ 0.55
Ubp1-206ENSMUST00000216558 CrcpO35427 148 aa18.48■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Hsp90aa1P07901 733 aaKnown RBP18.48■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Ccdc51Q3URS9 406 aa18.48■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Ces1dQ8VCT4 565 aa18.48■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Rbm43Q99J64 343 aa18.48■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Col23a1Q8K4G2 532 aa18.47■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Cnot6lQ8VEG6 555 aa18.47■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Aox1O54754 1333 aa18.47■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Slc4a4O88343 1079 aa18.46■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Ercc3P49135 783 aa18.46■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Ell2Q3UKU1 639 aa18.46■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Kif22Q3V300 660 aa18.46■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Pla2g12bQ99P27 195 aa18.46■□□□□ 0.55
Ubp1-206ENSMUST00000216558 CpdO89001 1377 aa18.46■□□□□ 0.55
Ubp1-206ENSMUST00000216558 Plcb2A3KGF7 1181 aa18.45■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Znf326O88291 580 aa18.45■□□□□ 0.54
Ubp1-206ENSMUST00000216558 NapbP28663 298 aa18.45■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Ctdnep1Q3TP92 244 aa18.45■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Cfap69Q8BH53 942 aa18.45■□□□□ 0.54
Ubp1-206ENSMUST00000216558 WdpcpQ8C456 722 aa18.45■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Pms1Q8K119 917 aa18.45■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Stx6Q9JKK1 255 aa18.45■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Myh2G3UW82 1942 aa18.45■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Fhdc1Q3ULZ2 1149 aa18.45■□□□□ 0.54
Ubp1-206ENSMUST00000216558 WaslQ91YD9 501 aa18.45■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Pold4Q9CWP8 107 aa18.45■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Aox3G3X982 1335 aa18.44■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Prom2Q3UUY6 835 aa18.44■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Acap3Q6NXL5 833 aa18.44■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Fchsd1Q6PFY1 688 aa18.44■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Eaf2Q91ZD6 262 aa18.44■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Zbtb43Q9DAI4 467 aa18.44■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Chd5A2A8L1 1946 aa18.43■□□□□ 0.54
Ubp1-206ENSMUST00000216558 DaxxO35613 739 aa18.43■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Fam83bQ0VBM2 1012 aa18.43■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Tmed8Q3UHI4 326 aa18.43■□□□□ 0.54
Ubp1-206ENSMUST00000216558 PogkQ80TC5 607 aa18.43■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Cep55Q8BT07 462 aa18.43■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Cep57l1Q8VDS7 400 aa18.43■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Krt84Q99M73 603 aa18.43■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Odf2lQ9D478 642 aa18.43■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Pes1Q9EQ61 584 aaKnown RBP18.43■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Pnpla6Q3TRM4 1355 aa18.43■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Med23Q80YQ2 1367 aa18.43■□□□□ 0.54
Ubp1-206ENSMUST00000216558 Kif20aP97329 887 aa18.42■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 44.3 ms