RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 NktrP30415 1453 aa17.85■□□□□ 0.45
Upf1-202ENSMUST00000215817 Akap2O54931 893 aa17.85■□□□□ 0.45
Upf1-202ENSMUST00000215817 Asap2Q7SIG6 958 aa17.85■□□□□ 0.45
Upf1-202ENSMUST00000215817 Hook1Q8BIL5 728 aa17.85■□□□□ 0.45
Upf1-202ENSMUST00000215817 Tbc1d32Q3URV1 1296 aa17.84■□□□□ 0.45
Upf1-202ENSMUST00000215817 Paxip1Q6NZQ4 1056 aa17.84■□□□□ 0.45
Upf1-202ENSMUST00000215817 Fam13bQ8K2H3 851 aa17.84■□□□□ 0.45
Upf1-202ENSMUST00000215817 Taf5lQ91WQ5 589 aa17.84■□□□□ 0.45
Upf1-202ENSMUST00000215817 Usp21Q9QZL6 566 aa17.84■□□□□ 0.45
Upf1-202ENSMUST00000215817 Scn4aQ9ER60 1841 aa17.84■□□□□ 0.45
Upf1-202ENSMUST00000215817 Cnnm2Q3TWN3 875 aa17.84■□□□□ 0.45
Upf1-202ENSMUST00000215817 Tnrc6bQ8BKI2 1810 aaKnown RBP17.83■□□□□ 0.45
Upf1-202ENSMUST00000215817 Limch1Q3UH68 1057 aa17.83■□□□□ 0.45
Upf1-202ENSMUST00000215817 Myoz2Q9JJW5 264 aa17.83■□□□□ 0.45
Upf1-202ENSMUST00000215817 Prpf4bQ61136 1007 aaKnown RBP17.83■□□□□ 0.44
Upf1-202ENSMUST00000215817 Sp4Q62445 782 aa17.83■□□□□ 0.44
Upf1-202ENSMUST00000215817 Phf14Q9D4H9 881 aa17.83■□□□□ 0.44
Upf1-202ENSMUST00000215817 Wasf1Q8R5H6 559 aa17.83■□□□□ 0.44
Upf1-202ENSMUST00000215817 LlphQ9D945 130 aaKnown RBP17.83■□□□□ 0.44
Upf1-202ENSMUST00000215817 Stat1P42225 749 aa17.82■□□□□ 0.44
Upf1-202ENSMUST00000215817 March6Q6ZQ89 909 aa17.82■□□□□ 0.44
Upf1-202ENSMUST00000215817 Ppp6r3Q922D4 844 aa17.82■□□□□ 0.44
Upf1-202ENSMUST00000215817 Rnaseh2aQ9CWY8 301 aa17.82■□□□□ 0.44
Upf1-202ENSMUST00000215817 Dpp7Q9ET22 506 aa17.82■□□□□ 0.44
Upf1-202ENSMUST00000215817 Pdcd6ipQ9WU78 869 aaKnown RBP17.82■□□□□ 0.44
Upf1-202ENSMUST00000215817 Rad50P70388 1312 aa17.82■□□□□ 0.44
Upf1-202ENSMUST00000215817 Cntnap1O54991 1385 aa17.82■□□□□ 0.44
Upf1-202ENSMUST00000215817 Prl7a2O54831 253 aa17.82■□□□□ 0.44
Upf1-202ENSMUST00000215817 Ppm1mQ8BU27 406 aa17.82■□□□□ 0.44
Upf1-202ENSMUST00000215817 GlmnQ8BZM1 596 aa17.82■□□□□ 0.44
Upf1-202ENSMUST00000215817 9230110C19RikQ8CC70 267 aa17.82■□□□□ 0.44
Upf1-202ENSMUST00000215817 Emilin1Q99K41 1017 aa17.82■□□□□ 0.44
Upf1-202ENSMUST00000215817 Ciao1Q99KN2 339 aa17.82■□□□□ 0.44
Upf1-202ENSMUST00000215817 Abcc4E9Q236 1325 aa17.82■□□□□ 0.44
Upf1-202ENSMUST00000215817 Cyp2c68K7N6C2 491 aa17.82■□□□□ 0.44
Upf1-202ENSMUST00000215817 VrtnQ3SYK4 740 aa17.82■□□□□ 0.44
Upf1-202ENSMUST00000215817 Rbm43Q99J64 343 aa17.82■□□□□ 0.44
Upf1-202ENSMUST00000215817 Eid1Q9DCR4 169 aa17.82■□□□□ 0.44
Upf1-202ENSMUST00000215817 Flt4P35917 1363 aa17.81■□□□□ 0.44
Upf1-202ENSMUST00000215817 Gm30191A0A0U1RNT7 187 aa17.81■□□□□ 0.44
Upf1-202ENSMUST00000215817 Pold4Q9CWP8 107 aa17.81■□□□□ 0.44
Upf1-202ENSMUST00000215817 Trmt44Q9D2Q2 713 aa17.81■□□□□ 0.44
Upf1-202ENSMUST00000215817 Ift172Q6VH22 1749 aa17.81■□□□□ 0.44
Upf1-202ENSMUST00000215817 Mst1rQ62190 1378 aa17.81■□□□□ 0.44
Upf1-202ENSMUST00000215817 Atp6v0a2P15920 856 aa17.81■□□□□ 0.44
Upf1-202ENSMUST00000215817 Uba5Q8VE47 403 aa17.81■□□□□ 0.44
Upf1-202ENSMUST00000215817 Cep89Q9CZX2 791 aa17.81■□□□□ 0.44
Upf1-202ENSMUST00000215817 Pmfbp1Q9WVQ0 1022 aa17.81■□□□□ 0.44
Upf1-202ENSMUST00000215817 Chd2E9PZM4 1827 aaKnown RBP17.81■□□□□ 0.44
Upf1-202ENSMUST00000215817 Cyp26c1B2RXA7 518 aa17.8■□□□□ 0.44
Upf1-202ENSMUST00000215817 1810065E05RikQ5NC41 235 aa17.8■□□□□ 0.44
Upf1-202ENSMUST00000215817 Gpr101Q80T62 511 aa17.8■□□□□ 0.44
Upf1-202ENSMUST00000215817 Pus3Q9JI38 481 aa17.8■□□□□ 0.44
Upf1-202ENSMUST00000215817 Camta1A2A891 1682 aa17.8■□□□□ 0.44
Upf1-202ENSMUST00000215817 Lbhd1A0A087WPA0 259 aa17.8■□□□□ 0.44
Upf1-202ENSMUST00000215817 Mdh1bQ5F204 500 aa17.8■□□□□ 0.44
Upf1-202ENSMUST00000215817 Ankrd13aQ80UP5 588 aa17.8■□□□□ 0.44
Upf1-202ENSMUST00000215817 Gripap1Q8VD04 806 aa17.8■□□□□ 0.44
Upf1-202ENSMUST00000215817 Lmtk3Q5XJV6 1424 aa17.8■□□□□ 0.44
Upf1-202ENSMUST00000215817 Kif20bQ80WE4 1774 aaKnown RBP17.8■□□□□ 0.44
Upf1-202ENSMUST00000215817 MetP16056 1379 aa17.8■□□□□ 0.44
Upf1-202ENSMUST00000215817 Magea6O89010 325 aa17.8■□□□□ 0.44
Upf1-202ENSMUST00000215817 Rbm15bQ6PHZ5 887 aaKnown RBP17.8■□□□□ 0.44
Upf1-202ENSMUST00000215817 Magea3Q6T340 320 aa17.8■□□□□ 0.44
Upf1-202ENSMUST00000215817 WaslQ91YD9 501 aa17.8■□□□□ 0.44
Upf1-202ENSMUST00000215817 Dph6Q9CQ28 267 aa17.8■□□□□ 0.44
Upf1-202ENSMUST00000215817 Armc3A2AU72 881 aa17.8■□□□□ 0.44
Upf1-202ENSMUST00000215817 Stat5bP42232 786 aa17.8■□□□□ 0.44
Upf1-202ENSMUST00000215817 IarsQ8BU30 1262 aa17.8■□□□□ 0.44
Upf1-202ENSMUST00000215817 Glipr1l2Q9CQ35 332 aa17.8■□□□□ 0.44
Upf1-202ENSMUST00000215817 Foxo4Q9WVH3 505 aa17.8■□□□□ 0.44
Upf1-202ENSMUST00000215817 Crb1Q8VHS2 1405 aa17.8■□□□□ 0.44
Upf1-202ENSMUST00000215817 Nphp3Q7TNH6 1325 aa17.79■□□□□ 0.44
Upf1-202ENSMUST00000215817 Kif3aP28741 701 aa17.79■□□□□ 0.44
Upf1-202ENSMUST00000215817 Gm5592Q3V0A6 857 aa17.79■□□□□ 0.44
Upf1-202ENSMUST00000215817 Kif22Q3V300 660 aa17.79■□□□□ 0.44
Upf1-202ENSMUST00000215817 Krt85Q9Z2T6 507 aa17.79■□□□□ 0.44
Upf1-202ENSMUST00000215817 Myom1Q62234 1667 aaKnown RBP17.79■□□□□ 0.44
Upf1-202ENSMUST00000215817 Kif4P33174 1231 aa17.79■□□□□ 0.44
Upf1-202ENSMUST00000215817 Mex3cQ05A36 652 aaKnown RBP17.79■□□□□ 0.44
Upf1-202ENSMUST00000215817 Slc38a10Q5I012 1090 aa17.79■□□□□ 0.44
Upf1-202ENSMUST00000215817 Liat1Q810M6 228 aa17.79■□□□□ 0.44
Upf1-202ENSMUST00000215817 Sptlc3Q8BG54 563 aa17.79■□□□□ 0.44
Upf1-202ENSMUST00000215817 Rnf214Q8BFU3 668 aaKnown RBP17.79■□□□□ 0.44
Upf1-202ENSMUST00000215817 Pdzph1Q8BGR1 1238 aa17.79■□□□□ 0.44
Upf1-202ENSMUST00000215817 Slurp2P0DP59 97 aa17.79■□□□□ 0.44
Upf1-202ENSMUST00000215817 U2af1l4Q8BGJ9 220 aa17.79■□□□□ 0.44
Upf1-202ENSMUST00000215817 Hirip3Q8BLH7 601 aa17.79■□□□□ 0.44
Upf1-202ENSMUST00000215817 Ccne2Q9Z238 404 aa17.79■□□□□ 0.44
Upf1-202ENSMUST00000215817 Tti2Q8BGV4 512 aa17.78■□□□□ 0.44
Upf1-202ENSMUST00000215817 Ccdc43Q9CR29 222 aaKnown RBP17.78■□□□□ 0.44
Upf1-202ENSMUST00000215817 Iqca1Q9CUL5 857 aa17.78■□□□□ 0.44
Upf1-202ENSMUST00000215817 Chd4Q6PDQ2 1915 aaKnown RBP17.78■□□□□ 0.44
Upf1-202ENSMUST00000215817 Ccdc66Q6NS45 935 aa17.78■□□□□ 0.44
Upf1-202ENSMUST00000215817 FliiQ9JJ28 1271 aa17.78■□□□□ 0.44
Upf1-202ENSMUST00000215817 Setdb1O88974 1307 aa17.78■□□□□ 0.44
Upf1-202ENSMUST00000215817 Prr16A3KMN5 304 aa17.78■□□□□ 0.44
Upf1-202ENSMUST00000215817 Dnm1P39053 867 aa17.78■□□□□ 0.44
Upf1-202ENSMUST00000215817 Palm3A2TJV2 734 aa17.77■□□□□ 0.44
Upf1-202ENSMUST00000215817 Pagr1bF6V0H0 108 aa17.77■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 126.3 ms