RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 1700029H14RikE9PY36 240 aa15.83■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Ano10Q8BH79 659 aa15.83■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 1700006A11RikB9EHI3 544 aa15.83■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Luzp1Q8R4U7 1068 aaKnown RBP15.83■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Tbc1d8Q9Z1A9 1134 aa15.83■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Prl3d1P18121 224 aa15.82■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Brinp3Q499E0 766 aa15.82■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Chd1lQ9CXF7 900 aa15.82■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Cyp27a1Q9DBG1 533 aa15.82■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 PigbQ9JJQ0 542 aa15.82■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Ms4a1P19437 291 aa15.82■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Clul1Q3ZRW6 464 aa15.82■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Trim25Q61510 634 aaKnown RBP15.82■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Erlin1Q91X78 346 aa15.82■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Adamts7Q68SA9 1657 aa15.82■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 TrdnE9Q9K5 693 aa15.82■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Il4rP16382 810 aa15.82■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 CpvlQ9D3S9 478 aa15.82■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 NfkbibQ60778 359 aa15.82■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Ctr9Q62018 1173 aaKnown RBP15.82■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Sycp1Q62209 993 aa15.82■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Lmbrd2Q8C561 694 aa15.82■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Edc3Q8K2D3 508 aaKnown RBP15.82■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 ParnQ8VDG3 624 aa15.82■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Pcdhb5Q91XZ5 792 aa15.82■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 IncenpQ9WU62 880 aa15.82■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Tubb5P99024 444 aaKnown RBP15.81■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Zbtb45Q52KG4 520 aa15.81■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Myl6bQ8CI43 207 aa15.81■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Commd10Q8JZY2 202 aa15.81■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Tekt3Q6X6Z7 490 aa15.81■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Dhx38Q80X98 1228 aa15.81■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Rtn1Q8K0T0 780 aa15.81■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Ppp1r37Q8BKR5 712 aa15.8■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Ccdc73Q8CDM4 1066 aa15.8■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Rbm19Q8R3C6 952 aaKnown RBP15.8■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Lrrc45Q8CIM1 670 aa15.8■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 CenphQ9QYM8 241 aa15.8■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 PtprmP28828 1452 aa15.8■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Dapk3O54784 448 aa15.8■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Ets1P27577 440 aa15.8■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Cep120Q7TSG1 988 aa15.8■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Ccdc181Q80ZU5 509 aa15.8■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Mindy4Q3UQI9 744 aa15.8■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Anp32cQ64G17 123 aa15.8■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 SltmQ8CH25 1031 aaKnown RBP15.8■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Brd3Q8K2F0 726 aaKnown RBP15.8■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Gtf3c5Q8R2T8 520 aa15.8■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Tlr7P58681 1050 aa15.79■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Cep170bQ80U49 1574 aa15.79■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Tsg101Q61187 391 aa15.79■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Serpinb6bO08804 377 aa15.79■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 F2rP30558 430 aa15.79■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Cap2Q9CYT6 476 aa15.79■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Olr1Q9EQ09 363 aa15.79■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 InsrrQ9WTL4 1300 aa15.79■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 GmnnO88513 206 aa15.79■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Slc27a3O88561 667 aa15.79■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Kcnj4P52189 445 aa15.79■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Ppfia3P60469 1194 aa15.79■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Adam1aQ60813 791 aa15.79■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Palm3A2TJV2 734 aa15.78■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Gzf1Q4VBD9 706 aa15.78■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Ciao1Q99KN2 339 aa15.78■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Smtnl1Q99LM3 459 aa15.78■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Clip2Q9Z0H8 1047 aa15.78■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Anxa1P10107 346 aaKnown RBP15.78■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Sdc2P43407 202 aa15.78■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Kif2cQ922S8 721 aa15.78■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Gm29094F6Q785 221 aa15.78■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Rps8P62242 208 aaKnown RBP15.78■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Esyt1Q3U7R1 1092 aaKnown RBP15.78■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Fchsd1Q6PFY1 688 aa15.78■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Tacc1Q6Y685 774 aa15.78■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Col20a1Q923P0 1320 aa15.78■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Tgfb1i1Q62219 461 aa15.78■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Ccdc93Q7TQK5 629 aa15.78■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Homer1Q9Z2Y3 366 aa15.78■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Gm45015A0A140LII9 184 aa15.77■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Gm18336A0A140LIU8 765 aa15.77■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Npc1l1Q6T3U4 1333 aa15.77■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Trim30cD3YVI9 513 aa15.77■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Ranbp6Q8BIV3 1105 aa15.77■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Xrn1P97789 1719 aaKnown RBP15.77■□□□□ 0.12
Pcdha1-202ENSMUST00000193839 Ppfibp2O35711 882 aa15.77■□□□□ 0.11
Pcdha1-202ENSMUST00000193839 IqcgQ80W32 419 aa15.77■□□□□ 0.11
Pcdha1-202ENSMUST00000193839 Dis3l2Q8CI75 870 aaKnown RBP15.77■□□□□ 0.11
Pcdha1-202ENSMUST00000193839 Arhgef6Q8K4I3 771 aa15.77■□□□□ 0.11
Pcdha1-202ENSMUST00000193839 Baiap2l1Q9DBJ3 514 aa15.77■□□□□ 0.11
Pcdha1-202ENSMUST00000193839 Vps33bP59016 617 aa15.77■□□□□ 0.11
Pcdha1-202ENSMUST00000193839 Pik3ap1Q9EQ32 811 aa15.77■□□□□ 0.11
Pcdha1-202ENSMUST00000193839 Dip2bQ3UH60 1574 aa15.76■□□□□ 0.11
Pcdha1-202ENSMUST00000193839 Fam170aQ66LM6 333 aa15.76■□□□□ 0.11
Pcdha1-202ENSMUST00000193839 Snx13Q6PHS6 957 aa15.76■□□□□ 0.11
Pcdha1-202ENSMUST00000193839 Taf5lQ91WQ5 589 aa15.76■□□□□ 0.11
Pcdha1-202ENSMUST00000193839 Ehd4Q9EQP2 541 aa15.76■□□□□ 0.11
Pcdha1-202ENSMUST00000193839 Sptlc2P97363 560 aaKnown RBP15.76■□□□□ 0.11
Pcdha1-202ENSMUST00000193839 Atp1b3P97370 278 aa15.76■□□□□ 0.11
Pcdha1-202ENSMUST00000193839 EspnlQ3UYR4 1005 aa15.76■□□□□ 0.11
Pcdha1-202ENSMUST00000193839 Aox1O54754 1333 aa15.76■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 23.8 ms