RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Hap1O35668 628 aa15.02■□□□□ -0
Nup88-203ENSMUST00000108531 Anks1aP59672 1150 aa15.02■□□□□ -0
Nup88-203ENSMUST00000108531 Sptlc2P97363 560 aaKnown RBP15.02■□□□□ -0
Nup88-203ENSMUST00000108531 Atf3Q60765 181 aa15.02■□□□□ -0
Nup88-203ENSMUST00000108531 Ints5Q8CHT3 1018 aa15.02■□□□□ -0
Nup88-203ENSMUST00000108531 Zfp142G5E869 1843 aa15.02□□□□□ -0.01
Nup88-203ENSMUST00000108531 Phlpp1Q8CHE4 1687 aa15.02□□□□□ -0.01
Nup88-203ENSMUST00000108531 Cyp3a57D3YYZ0 503 aa15.02□□□□□ -0.01
Nup88-203ENSMUST00000108531 Ccng2O08918 344 aa15.02□□□□□ -0.01
Nup88-203ENSMUST00000108531 Mtx1P47802 317 aa15.02□□□□□ -0.01
Nup88-203ENSMUST00000108531 Itga6Q61739 1091 aa15.02□□□□□ -0.01
Nup88-203ENSMUST00000108531 Cep55Q8BT07 462 aa15.02□□□□□ -0.01
Nup88-203ENSMUST00000108531 Hps3Q91VB4 1002 aa15.02□□□□□ -0.01
Nup88-203ENSMUST00000108531 Surf1P09925 306 aa15.01□□□□□ -0.01
Nup88-203ENSMUST00000108531 Kcnd1Q03719 651 aa15.01□□□□□ -0.01
Nup88-203ENSMUST00000108531 Cep63Q3UPP8 700 aa15.01□□□□□ -0.01
Nup88-203ENSMUST00000108531 Gm28047Q3US59 414 aa15.01□□□□□ -0.01
Nup88-203ENSMUST00000108531 Zfp91Q62511 572 aa15.01□□□□□ -0.01
Nup88-203ENSMUST00000108531 Frmd3Q8BHD4 595 aa15.01□□□□□ -0.01
Nup88-203ENSMUST00000108531 Ttc19Q8CC21 365 aa15.01□□□□□ -0.01
Nup88-203ENSMUST00000108531 Appbp2Q9DAX9 585 aa15.01□□□□□ -0.01
Nup88-203ENSMUST00000108531 Xpo4Q9ESJ0 1151 aa15.01□□□□□ -0.01
Nup88-203ENSMUST00000108531 Kdm3aQ6PCM1 1323 aa15.01□□□□□ -0.01
Nup88-203ENSMUST00000108531 Gm43638A0A0J9YU36 694 aa15.01□□□□□ -0.01
Nup88-203ENSMUST00000108531 Ankib1Q6ZPS6 1085 aa15.01□□□□□ -0.01
Nup88-203ENSMUST00000108531 Ncoa5Q91W39 579 aaKnown RBP15.01□□□□□ -0.01
Nup88-203ENSMUST00000108531 Ythdc1E9Q5K9 736 aaKnown RBP15□□□□□ -0.01
Nup88-203ENSMUST00000108531 Tpcn2Q8BWC0 731 aa15□□□□□ -0.01
Nup88-203ENSMUST00000108531 Acsbg1Q99PU5 721 aa15□□□□□ -0.01
Nup88-203ENSMUST00000108531 CenpqQ9CPQ5 267 aa15□□□□□ -0.01
Nup88-203ENSMUST00000108531 Col18a1P39061 1774 aa15□□□□□ -0.01
Nup88-203ENSMUST00000108531 Gm21680A0A0G2JGR8 267 aa15□□□□□ -0.01
Nup88-203ENSMUST00000108531 TsksO54887 585 aa15□□□□□ -0.01
Nup88-203ENSMUST00000108531 ErmnQ5EBJ4 281 aa15□□□□□ -0.01
Nup88-203ENSMUST00000108531 Kiaa1524Q8BWY9 907 aa15□□□□□ -0.01
Nup88-203ENSMUST00000108531 Fsd2Q8BZ52 692 aa15□□□□□ -0.01
Nup88-203ENSMUST00000108531 Vps33aQ9D2N9 598 aa15□□□□□ -0.01
Nup88-203ENSMUST00000108531 Stxbp4Q9WV89 557 aa15□□□□□ -0.01
Nup88-203ENSMUST00000108531 Tpm1P58771 284 aa14.99□□□□□ -0.01
Nup88-203ENSMUST00000108531 Nol10Q5RJG1 687 aaKnown RBP14.99□□□□□ -0.01
Nup88-203ENSMUST00000108531 Map10Q8BJS7 891 aa14.99□□□□□ -0.01
Nup88-203ENSMUST00000108531 Znf568E9PYI1 671 aa14.99□□□□□ -0.01
Nup88-203ENSMUST00000108531 Lmod3E9QA62 571 aa14.99□□□□□ -0.01
Nup88-203ENSMUST00000108531 Col3a1P08121 1464 aa14.98□□□□□ -0.01
Nup88-203ENSMUST00000108531 Bin1O08539 588 aaKnown RBP14.98□□□□□ -0.01
Nup88-203ENSMUST00000108531 Pfkfb1P70266 471 aa14.98□□□□□ -0.01
Nup88-203ENSMUST00000108531 Panx2Q6IMP4 677 aa14.98□□□□□ -0.01
Nup88-203ENSMUST00000108531 Fam160b2Q80YR2 744 aa14.98□□□□□ -0.01
Nup88-203ENSMUST00000108531 Zfp202Q8C879 641 aa14.98□□□□□ -0.01
Nup88-203ENSMUST00000108531 Ankrd1Q9CR42 319 aa14.98□□□□□ -0.01
Nup88-203ENSMUST00000108531 Gm20425E9Q035 978 aaKnown RBP14.98□□□□□ -0.01
Nup88-203ENSMUST00000108531 Znf326O88291 580 aa14.98□□□□□ -0.01
Nup88-203ENSMUST00000108531 SrprbP47758 269 aa14.98□□□□□ -0.01
Nup88-203ENSMUST00000108531 Sox30Q8CGW4 782 aa14.98□□□□□ -0.01
Nup88-203ENSMUST00000108531 Cnot6lQ8VEG6 555 aa14.98□□□□□ -0.01
Nup88-203ENSMUST00000108531 Odf2lQ9D478 642 aa14.98□□□□□ -0.01
Nup88-203ENSMUST00000108531 Ftl2P49945 183 aa14.97□□□□□ -0.01
Nup88-203ENSMUST00000108531 Kri1Q8VDQ9 704 aaKnown RBP14.97□□□□□ -0.01
Nup88-203ENSMUST00000108531 IncenpQ9WU62 880 aa14.97□□□□□ -0.01
Nup88-203ENSMUST00000108531 Ddx41Q91VN6 622 aaKnown RBP14.97□□□□□ -0.01
Nup88-203ENSMUST00000108531 Sipa1l3G3X9J0 1776 aa14.96□□□□□ -0.01
Nup88-203ENSMUST00000108531 Dhx8A2A4P0 1244 aaKnown RBP14.96□□□□□ -0.01
Nup88-203ENSMUST00000108531 Ift57Q8BXG3 429 aa14.96□□□□□ -0.01
Nup88-203ENSMUST00000108531 Rec8Q8C5S7 591 aa14.96□□□□□ -0.01
Nup88-203ENSMUST00000108531 Pcdhb22Q91XZ8 794 aa14.96□□□□□ -0.01
Nup88-203ENSMUST00000108531 Elf2Q9JHC9 593 aa14.96□□□□□ -0.01
Nup88-203ENSMUST00000108531 Myh7Q91Z83 1935 aa14.96□□□□□ -0.01
Nup88-203ENSMUST00000108531 CpdO89001 1377 aa14.96□□□□□ -0.02
Nup88-203ENSMUST00000108531 Jakmip2D3YXK0 820 aa14.95□□□□□ -0.02
Nup88-203ENSMUST00000108531 Atp8a2P98200 1148 aa14.95□□□□□ -0.02
Nup88-203ENSMUST00000108531 Clca2Q8BG22 942 aa14.95□□□□□ -0.02
Nup88-203ENSMUST00000108531 Zkscan8Q8BSL0 588 aa14.95□□□□□ -0.02
Nup88-203ENSMUST00000108531 Zkscan5Q9Z1D8 819 aa14.95□□□□□ -0.02
Nup88-203ENSMUST00000108531 Ccne2Q9Z238 404 aa14.95□□□□□ -0.02
Nup88-203ENSMUST00000108531 Tnrc6cQ3UHC0 1690 aaKnown RBP14.95□□□□□ -0.02
Nup88-203ENSMUST00000108531 Grin2dQ03391 1323 aa14.95□□□□□ -0.02
Nup88-203ENSMUST00000108531 Gm12185Q5NCB2 835 aa14.95□□□□□ -0.02
Nup88-203ENSMUST00000108531 Prkag3Q8BGM7 489 aa14.95□□□□□ -0.02
Nup88-203ENSMUST00000108531 Sec62Q8BU14 398 aaKnown RBP14.95□□□□□ -0.02
Nup88-203ENSMUST00000108531 Chrna2Q91X60 512 aa14.95□□□□□ -0.02
Nup88-203ENSMUST00000108531 Filip1Q9CS72 1211 aa14.95□□□□□ -0.02
Nup88-203ENSMUST00000108531 Acot9Q9R0X4 439 aaKnown RBP14.95□□□□□ -0.02
Nup88-203ENSMUST00000108531 Cers3Q1A3B0 383 aa14.94□□□□□ -0.02
Nup88-203ENSMUST00000108531 Igflr1Q3U4N7 345 aa14.94□□□□□ -0.02
Nup88-203ENSMUST00000108531 Edrf1Q6GQV7 1239 aa14.94□□□□□ -0.02
Nup88-203ENSMUST00000108531 Dnm3Q8BZ98 863 aa14.94□□□□□ -0.02
Nup88-203ENSMUST00000108531 Ccdc121E9Q6D3 323 aa14.94□□□□□ -0.02
Nup88-203ENSMUST00000108531 Metap2O08663 478 aaKnown RBP14.94□□□□□ -0.02
Nup88-203ENSMUST00000108531 Cdkl5Q3UTQ8 938 aa14.94□□□□□ -0.02
Nup88-203ENSMUST00000108531 Cdc37Q61081 379 aa14.94□□□□□ -0.02
Nup88-203ENSMUST00000108531 Acnat2Q8BGG9 420 aa14.94□□□□□ -0.02
Nup88-203ENSMUST00000108531 Alx1Q8C8B0 326 aa14.94□□□□□ -0.02
Nup88-203ENSMUST00000108531 Plcb3P51432 1234 aaKnown RBP14.93□□□□□ -0.02
Nup88-203ENSMUST00000108531 Cplx1P63040 134 aa14.93□□□□□ -0.02
Nup88-203ENSMUST00000108531 BcanQ61361 883 aa14.93□□□□□ -0.02
Nup88-203ENSMUST00000108531 IqcgQ80W32 419 aa14.93□□□□□ -0.02
Nup88-203ENSMUST00000108531 Mylk2Q8VCR8 613 aa14.93□□□□□ -0.02
Nup88-203ENSMUST00000108531 4930548H24RikQ9D496 437 aa14.93□□□□□ -0.02
Nup88-203ENSMUST00000108531 Kcnq5Q9JK45 933 aa14.93□□□□□ -0.02
Nup88-203ENSMUST00000108531 Crb1Q8VHS2 1405 aa14.93□□□□□ -0.02
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms