RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Anks1aP59672 1150 aa13.42□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Rec8Q8C5S7 591 aa13.42□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Fam114a1Q9D281 569 aa13.42□□□□□ -0.26
Col9a1-202ENSMUST00000088349 CoblQ5NBX1 1337 aaKnown RBP13.42□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Serpinb6bO08804 377 aa13.42□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Nol10Q5RJG1 687 aaKnown RBP13.42□□□□□ -0.26
Col9a1-202ENSMUST00000088349 NfkbibQ60778 359 aa13.42□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Atg9aQ68FE2 551 aa13.42□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Zbtb40Q6PCS8 1258 aa13.42□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Acnat2Q8BGG9 420 aa13.42□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Kiaa1524Q8BWY9 907 aa13.42□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Magi2Q9WVQ1 1275 aa13.42□□□□□ -0.26
Col9a1-202ENSMUST00000088349 CtcfQ61164 736 aaKnown RBP13.41□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Itga6Q61739 1091 aa13.41□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Larp6Q8BN59 492 aa13.41□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Zfp202Q8C879 641 aa13.41□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Nid2O88322 1403 aa13.41□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Col4a1P02463 1669 aa13.41□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Tcof1O08784 1320 aaKnown RBP13.41□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Nrxn3Q6P9K9 1571 aa13.41□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Prdm1Q60636 856 aa13.41□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Ppp4r3aQ6P2K6 820 aa13.41□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Srek1Q8BZX4 494 aaKnown RBP13.41□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Atad2Q8CDM1 1040 aa13.41□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Tmc2Q8R4P4 888 aa13.41□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Sept12Q9D451 317 aa13.41□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Mei1Q9D4I2 1268 aa13.41□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Kcnj4P52189 445 aa13.41□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Cplx1P63040 134 aa13.41□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Znf532Q6NXK2 1036 aa13.41□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Cep55Q8BT07 462 aa13.41□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Q8BT18 775 aa13.41□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Lmod1Q8BVA4 595 aa13.41□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Vps18Q8R307 973 aa13.41□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Nip7Q9CXK8 180 aaKnown RBP13.41□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Sil1Q9EPK6 465 aa13.41□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Large1Q9Z1M7 756 aa13.41□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Paxbp1P58501 919 aa13.4□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Nlrp1aQ2LKU9 1182 aa13.4□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Ncaph2Q8BSP2 607 aa13.4□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Tmx1Q8VBT0 278 aa13.4□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Acot9Q9R0X4 439 aaKnown RBP13.4□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Ccne2Q9Z238 404 aa13.4□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Slc1a4O35874 532 aa13.4□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Pfkfb1P70266 471 aa13.4□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Brinp3Q499E0 766 aa13.4□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Fsd2Q8BZ52 692 aa13.4□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Naa16Q9DBB4 864 aa13.4□□□□□ -0.26
Col9a1-202ENSMUST00000088349 Cdc45Q9Z1X9 566 aa13.4□□□□□ -0.26
Col9a1-202ENSMUST00000088349 TnksQ6PFX9 1320 aa13.39□□□□□ -0.27
Col9a1-202ENSMUST00000088349 LtkP08923 888 aa13.39□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Ms4a1P19437 291 aa13.39□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Gsdma2Q32M21 443 aa13.39□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Prpf4bQ61136 1007 aaKnown RBP13.39□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Trim25Q61510 634 aaKnown RBP13.39□□□□□ -0.27
Col9a1-202ENSMUST00000088349 RbsnQ80Y56 783 aa13.39□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Nop2Q922K7 793 aaKnown RBP13.39□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Gnl2Q99LH1 728 aaKnown RBP13.39□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Slc4a1P04919 929 aa13.38□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Ccdc102aQ3TMW1 549 aa13.38□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Myl10Q62082 202 aa13.38□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Tmem59lQ7TNI2 337 aa13.38□□□□□ -0.27
Col9a1-202ENSMUST00000088349 DymQ8CHY3 669 aa13.38□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Ints4Q8CIM8 964 aa13.38□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Diaph1O08808 1255 aa13.38□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Dnajc2P54103 621 aaKnown RBP13.38□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Panx2Q6IMP4 677 aa13.38□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Zeb2Q9R0G7 1215 aa13.38□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Fbxl16A2RT62 479 aa13.38□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Eya2O08575 532 aa13.38□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Shisa4Q8CA71 197 aa13.38□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Arl8aQ8VEH3 186 aa13.38□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Dnm1P39053 867 aa13.37□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Mcm6P97311 821 aa13.37□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Cep120Q7TSG1 988 aa13.37□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Pnpla2Q8BJ56 486 aa13.37□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Stac3Q8BZ71 360 aa13.37□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Smc4Q8CG47 1286 aa13.37□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Atp12aQ9Z1W8 1035 aa13.37□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Uri1Q3TLD5 531 aa13.37□□□□□ -0.27
Col9a1-202ENSMUST00000088349 ZyxQ62523 564 aa13.37□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Drc7Q6V3W6 876 aa13.37□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Spag5Q7TME2 1165 aa13.37□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Cnot6lQ8VEG6 555 aa13.37□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Abcb6Q9DC29 842 aa13.37□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Popdc2Q9ES82 367 aa13.37□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Actn3O88990 900 aaKnown RBP13.36□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Me1P06801 572 aa13.36□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Zkscan8Q8BSL0 588 aa13.36□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Rdm1Q9CQK3 281 aa13.36□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Sos2Q02384 1333 aa13.36□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Grin2dQ03391 1323 aa13.36□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Jakmip2D3YXK0 820 aa13.36□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Asap2Q7SIG6 958 aa13.36□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Fam213aQ9CYH2 218 aa13.36□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Acap3Q6NXL5 833 aa13.36□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Znf653Q6YND2 615 aa13.36□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Wdr3Q8BHB4 942 aaKnown RBP13.36□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Ercc6lQ8BHK9 1240 aa13.36□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Pde3aQ9Z0X4 1141 aa13.36□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 22.1 ms