RNA–Protein interactions for RNA: ENSMUST00000040783.10

Usp40-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp40, Length 5,049 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-201ENSMUST00000040783 Snx25Q3ZT31 840 aa8.53□□□□□ -1.04
Usp40-201ENSMUST00000040783 Larp6Q8BN59 492 aa8.53□□□□□ -1.04
Usp40-201ENSMUST00000040783 Ccdc122Q8BVN0 290 aa8.53□□□□□ -1.04
Usp40-201ENSMUST00000040783 OscarQ8VBT3 265 aa8.53□□□□□ -1.04
Usp40-201ENSMUST00000040783 Slx4ipQ9D7Y9 413 aa8.53□□□□□ -1.04
Usp40-201ENSMUST00000040783 Baiap2l1Q9DBJ3 514 aa8.53□□□□□ -1.04
Usp40-201ENSMUST00000040783 Noc2lQ9WV70 747 aaKnown RBP8.53□□□□□ -1.04
Usp40-201ENSMUST00000040783 Col20a1Q923P0 1320 aa8.53□□□□□ -1.04
Usp40-201ENSMUST00000040783 Setbp1Q9Z180 1582 aa8.53□□□□□ -1.04
Usp40-201ENSMUST00000040783 LdhaP06151 332 aaKnown RBP8.53□□□□□ -1.04
Usp40-201ENSMUST00000040783 MarcksP26645 309 aaKnown RBP8.53□□□□□ -1.04
Usp40-201ENSMUST00000040783 Ifit2Q64112 472 aa8.53□□□□□ -1.04
Usp40-201ENSMUST00000040783 Haus2Q9CQS9 234 aa8.53□□□□□ -1.04
Usp40-201ENSMUST00000040783 CenphQ9QYM8 241 aa8.53□□□□□ -1.04
Usp40-201ENSMUST00000040783 Ncapd2Q8K2Z4 1392 aa8.53□□□□□ -1.04
Usp40-201ENSMUST00000040783 Gm30191A0A0U1RNT7 187 aa8.53□□□□□ -1.04
Usp40-201ENSMUST00000040783 Dnajc5P60904 198 aa8.53□□□□□ -1.04
Usp40-201ENSMUST00000040783 Gpr162Q3UN16 588 aa8.53□□□□□ -1.04
Usp40-201ENSMUST00000040783 Eme2Q56A04 373 aa8.53□□□□□ -1.04
Usp40-201ENSMUST00000040783 Ddx31Q6NZQ2 687 aaKnown RBP8.53□□□□□ -1.04
Usp40-201ENSMUST00000040783 RestQ8VIG1 1082 aa8.53□□□□□ -1.04
Usp40-201ENSMUST00000040783 BrapQ99MP8 591 aa8.53□□□□□ -1.04
Usp40-201ENSMUST00000040783 KdrP35918 1367 aa8.52□□□□□ -1.04
Usp40-201ENSMUST00000040783 Sp4Q62445 782 aa8.52□□□□□ -1.05
Usp40-201ENSMUST00000040783 Spag5Q7TME2 1165 aa8.52□□□□□ -1.05
Usp40-201ENSMUST00000040783 Stac3Q8BZ71 360 aa8.52□□□□□ -1.05
Usp40-201ENSMUST00000040783 Appbp2Q9DAX9 585 aa8.52□□□□□ -1.05
Usp40-201ENSMUST00000040783 Cabp5Q9JLK3 173 aa8.52□□□□□ -1.05
Usp40-201ENSMUST00000040783 Zscan29E9Q5B4 869 aa8.52□□□□□ -1.05
Usp40-201ENSMUST00000040783 Gm4758L7N258 96 aa8.52□□□□□ -1.05
Usp40-201ENSMUST00000040783 Mcm3P25206 812 aaKnown RBP8.52□□□□□ -1.05
Usp40-201ENSMUST00000040783 Map3k7clP58500 142 aa8.52□□□□□ -1.05
Usp40-201ENSMUST00000040783 Adam1aQ60813 791 aa8.52□□□□□ -1.05
Usp40-201ENSMUST00000040783 PaoxQ8C0L6 504 aa8.52□□□□□ -1.05
Usp40-201ENSMUST00000040783 Myom2Q14BI5 1463 aa8.52□□□□□ -1.05
Usp40-201ENSMUST00000040783 Jakmip2D3YXK0 820 aa8.52□□□□□ -1.05
Usp40-201ENSMUST00000040783 Parp1P11103 1013 aaKnown RBP8.52□□□□□ -1.05
Usp40-201ENSMUST00000040783 Plbd2Q3TCN2 594 aa8.52□□□□□ -1.05
Usp40-201ENSMUST00000040783 Zbtb40Q6PCS8 1258 aa8.52□□□□□ -1.05
Usp40-201ENSMUST00000040783 MycbpQ9EQS3 103 aa8.52□□□□□ -1.05
Usp40-201ENSMUST00000040783 Il15P48346 162 aa8.52□□□□□ -1.05
Usp40-201ENSMUST00000040783 Nucb1Q02819 459 aaKnown RBP8.52□□□□□ -1.05
Usp40-201ENSMUST00000040783 Dok7Q18PE0 504 aa8.52□□□□□ -1.05
Usp40-201ENSMUST00000040783 Nlrp2Q4PLS0 1046 aaKnown RBP8.52□□□□□ -1.05
Usp40-201ENSMUST00000040783 Nap1l4Q78ZA7 375 aaKnown RBP8.52□□□□□ -1.05
Usp40-201ENSMUST00000040783 Terf2O35144 541 aa8.51□□□□□ -1.05
Usp40-201ENSMUST00000040783 Ube2hP62257 183 aa8.51□□□□□ -1.05
Usp40-201ENSMUST00000040783 Ccdc97Q9DBT3 340 aa8.51□□□□□ -1.05
Usp40-201ENSMUST00000040783 Eif2ak4Q9QZ05 1648 aa8.51□□□□□ -1.05
Usp40-201ENSMUST00000040783 Stx1aO35526 288 aa8.51□□□□□ -1.05
Usp40-201ENSMUST00000040783 Cdca8Q8BHX3 289 aa8.51□□□□□ -1.05
Usp40-201ENSMUST00000040783 Pcdhb22Q91XZ8 794 aa8.51□□□□□ -1.05
Usp40-201ENSMUST00000040783 Ttc41Q692V3 1318 aa8.51□□□□□ -1.05
Usp40-201ENSMUST00000040783 MeiocA2AG06 965 aa8.51□□□□□ -1.05
Usp40-201ENSMUST00000040783 Prr16A3KMN5 304 aa8.51□□□□□ -1.05
Usp40-201ENSMUST00000040783 Anxa1P10107 346 aaKnown RBP8.51□□□□□ -1.05
Usp40-201ENSMUST00000040783 Map9Q3TRR0 646 aa8.51□□□□□ -1.05
Usp40-201ENSMUST00000040783 Znf219Q6IQX8 726 aa8.51□□□□□ -1.05
Usp40-201ENSMUST00000040783 Smim5Q8BT42 78 aa8.51□□□□□ -1.05
Usp40-201ENSMUST00000040783 Fermt2Q8CIB5 680 aa8.51□□□□□ -1.05
Usp40-201ENSMUST00000040783 Calml4Q91WQ9 153 aa8.51□□□□□ -1.05
Usp40-201ENSMUST00000040783 Tnip1Q9WUU8 647 aa8.51□□□□□ -1.05
Usp40-201ENSMUST00000040783 Pcdh10E9PXQ7 1057 aa8.51□□□□□ -1.05
Usp40-201ENSMUST00000040783 Bin1O08539 588 aaKnown RBP8.51□□□□□ -1.05
Usp40-201ENSMUST00000040783 Dync1i1O88485 628 aa8.51□□□□□ -1.05
Usp40-201ENSMUST00000040783 Ftl2P49945 183 aa8.51□□□□□ -1.05
Usp40-201ENSMUST00000040783 Sh3bp1P55194 680 aa8.51□□□□□ -1.05
Usp40-201ENSMUST00000040783 ItpripQ3TNL8 555 aa8.51□□□□□ -1.05
Usp40-201ENSMUST00000040783 Cyp24a1Q64441 514 aa8.51□□□□□ -1.05
Usp40-201ENSMUST00000040783 Ncapg2Q6DFV1 1138 aa8.51□□□□□ -1.05
Usp40-201ENSMUST00000040783 TxlnaQ6PAM1 554 aaKnown RBP8.51□□□□□ -1.05
Usp40-201ENSMUST00000040783 Lmbrd2Q8C561 694 aa8.51□□□□□ -1.05
Usp40-201ENSMUST00000040783 Fndc1E9Q043 1732 aa8.5□□□□□ -1.05
Usp40-201ENSMUST00000040783 Ccdc112A0AUP1 442 aa8.5□□□□□ -1.05
Usp40-201ENSMUST00000040783 Fermt1P59113 677 aa8.5□□□□□ -1.05
Usp40-201ENSMUST00000040783 MycbpapQ5SUV2 932 aa8.5□□□□□ -1.05
Usp40-201ENSMUST00000040783 9230110C19RikQ8CC70 267 aa8.5□□□□□ -1.05
Usp40-201ENSMUST00000040783 ClasrpQ8CFC7 668 aa8.5□□□□□ -1.05
Usp40-201ENSMUST00000040783 Ssfa2Q922B9 1252 aa8.5□□□□□ -1.05
Usp40-201ENSMUST00000040783 TnrQ8BYI9 1358 aa8.5□□□□□ -1.05
Usp40-201ENSMUST00000040783 AU019823E9PUQ3 292 aa8.5□□□□□ -1.05
Usp40-201ENSMUST00000040783 Prl3d1P18121 224 aa8.5□□□□□ -1.05
Usp40-201ENSMUST00000040783 Adora1Q60612 326 aa8.5□□□□□ -1.05
Usp40-201ENSMUST00000040783 Abcf1Q6P542 837 aaKnown RBP8.5□□□□□ -1.05
Usp40-201ENSMUST00000040783 Tmem119Q8R138 280 aa8.5□□□□□ -1.05
Usp40-201ENSMUST00000040783 Vps36Q91XD6 386 aa8.5□□□□□ -1.05
Usp40-201ENSMUST00000040783 Rnf34Q99KR6 376 aa8.5□□□□□ -1.05
Usp40-201ENSMUST00000040783 Usp19Q3UJD6 1360 aa8.5□□□□□ -1.05
Usp40-201ENSMUST00000040783 Pls1Q3V0K9 630 aa8.5□□□□□ -1.05
Usp40-201ENSMUST00000040783 Secisbp2lQ6A098 1086 aaKnown RBP8.5□□□□□ -1.05
Usp40-201ENSMUST00000040783 Sass6Q80UK7 654 aa8.5□□□□□ -1.05
Usp40-201ENSMUST00000040783 Sgsm1Q8BPQ7 1093 aa8.5□□□□□ -1.05
Usp40-201ENSMUST00000040783 Otud6bQ8K2H2 294 aa8.5□□□□□ -1.05
Usp40-201ENSMUST00000040783 Kiaa1024Q8K3V7 917 aa8.5□□□□□ -1.05
Usp40-201ENSMUST00000040783 Uhrf1bp1lA2RSJ4 1457 aa8.5□□□□□ -1.05
Usp40-201ENSMUST00000040783 Gm45140A0A0N4SUM8 220 aa8.49□□□□□ -1.05
Usp40-201ENSMUST00000040783 Fbf1A2A870 1173 aa8.49□□□□□ -1.05
Usp40-201ENSMUST00000040783 Kif22Q3V300 660 aa8.49□□□□□ -1.05
Usp40-201ENSMUST00000040783 Stxbp3Q60770 592 aa8.49□□□□□ -1.05
Usp40-201ENSMUST00000040783 Fmnl3Q6ZPF4 1028 aa8.49□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms