RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Map3k2Q61083 619 aa15.63■□□□□ 0.09
Col5a1-201ENSMUST00000028280 WtapQ9ER69 396 aa15.63■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Efcc1Q9JJF6 558 aa15.63■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Kank1E9Q238 1360 aa15.63■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Ak9G3UYQ4 1894 aa15.63■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Btn2a2A4QPC6 514 aa15.63■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Ccdc13D3YV10 709 aa15.63■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Tubb2aQ7TMM9 445 aa15.63■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Tubb2bQ9CWF2 445 aa15.63■□□□□ 0.09
Col5a1-201ENSMUST00000028280 CacybpQ9CXW3 229 aa15.63■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Plcb1Q9Z1B3 1216 aa15.63■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Polr3aB2RXC6 1390 aa15.63■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Krt13P08730 437 aa15.63■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Rad50P70388 1312 aa15.63■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Ppp1r21Q3TDD9 780 aa15.63■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Larp6Q8BN59 492 aa15.63■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Arhgef6Q8K4I3 771 aa15.63■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Sox13Q04891 613 aa15.63■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Ccdc157Q5SPX1 718 aa15.63■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Naip2Q9QUK4 1447 aa15.62■□□□□ 0.09
Col5a1-201ENSMUST00000028280 U2af2P26369 475 aaKnown RBP15.62■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Cnga4Q3UW12 575 aa15.62■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Fsip1Q9D3V5 435 aa15.62■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Sbno1Q689Z5 1390 aa15.62■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Zbtb3Q91X45 518 aa15.62■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Psmb7P70195 277 aa15.62■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Scaf1Q5U4C3 1256 aaKnown RBP15.62■□□□□ 0.09
Col5a1-201ENSMUST00000028280 P4ha1Q60715 534 aa15.62■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Snd1Q78PY7 910 aaKnown RBP15.62■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Rassf10Q8BL43 508 aa15.62■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Mterf4Q8BVN4 346 aa15.62■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Spats2Q8K1N4 545 aaKnown RBP15.62■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Ccdc89Q9DA73 370 aa15.62■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Hand2Q61039 217 aa15.62■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Lonp2Q9DBN5 852 aa15.62■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Gm1993A6X8I0 212 aa15.62■□□□□ 0.09
Col5a1-201ENSMUST00000028280 SlxD3Z347 212 aa15.62■□□□□ 0.09
Col5a1-201ENSMUST00000028280 ArsiQ32KI9 573 aa15.62■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Serpinb1cQ5SV42 375 aa15.62■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Mybpc2Q5XKE0 1136 aa15.62■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Nol11Q8BJW5 723 aaKnown RBP15.62■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Klc3Q91W40 508 aa15.62■□□□□ 0.09
Col5a1-201ENSMUST00000028280 NapgQ9CWZ7 312 aa15.62■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Traf1P39428 409 aa15.61■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Tcp11l1Q8BTG3 509 aa15.61■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Luc7l3Q5SUF2 432 aaKnown RBP15.61■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Stx12Q9ER00 274 aa15.61■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Irx4Q9QY61 515 aa15.61■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Plekho1Q9JIY0 408 aa15.61■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Dnajc21E9Q8D0 531 aa15.61■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Tbc1d5Q80XQ2 815 aa15.61■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Rbbp5Q8BX09 538 aaKnown RBP15.61■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Pih1h3bQ8C6P5 218 aa15.61■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Magi1Q6RHR9 1471 aa15.61■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Mcm10Q0VBD2 885 aa15.61■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Efhd1Q9D4J1 240 aa15.61■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Fhdc1Q3ULZ2 1149 aa15.61■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Stk38lQ7TSE6 464 aa15.61■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Ppfia3P60469 1194 aa15.61■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Taco1Q8K0Z7 294 aaKnown RBP15.61■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Msantd4Q91YU3 345 aa15.61■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Klhdc4Q921I2 584 aa15.61■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Trim7Q923T7 510 aa15.61■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Zkscan5Q9Z1D8 819 aa15.61■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Bfsp1A2AMT1 669 aa15.6■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Proca1B0QZF7 307 aa15.6■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Gm2030D3Z7C4 212 aa15.6■□□□□ 0.09
Col5a1-201ENSMUST00000028280 GnaqP21279 359 aa15.6■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Ankle2Q6P1H6 964 aa15.6■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Afap1Q80YS6 731 aa15.6■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Gm28043E0CXC2 719 aa15.6■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Leo1Q5XJE5 667 aa15.6■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Ubac1Q8VDI7 409 aa15.6■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Oas2E9Q9A9 742 aa15.6■□□□□ 0.09
Col5a1-201ENSMUST00000028280 HdxQ14B70 692 aa15.6■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Dnajc8Q6NZB0 253 aaKnown RBP15.6■□□□□ 0.09
Col5a1-201ENSMUST00000028280 LrgukQ9D5S7 820 aa15.6■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Ift122Q6NWV3 1182 aa15.6■□□□□ 0.09
Col5a1-201ENSMUST00000028280 HgsQ99LI8 775 aa15.6■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Caskin1Q6P9K8 1431 aa15.6■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Atp6v1aP50516 617 aaKnown RBP15.6■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Q3UPC7 1272 aa15.6■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Cyp7a1Q64505 503 aa15.6■□□□□ 0.09
Col5a1-201ENSMUST00000028280 KaznQ69ZS8 779 aa15.6■□□□□ 0.09
Col5a1-201ENSMUST00000028280 AticQ9CWJ9 592 aaKnown RBP15.6■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Q3UJC8 639 aa15.6■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Bzw2Q91VK1 419 aaKnown RBP15.6■□□□□ 0.09
Col5a1-201ENSMUST00000028280 NsmfQ99NF2 532 aa15.6■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Dennd3A2RT67 1274 aa15.59■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Fgd6Q69ZL1 1399 aa15.59■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Taf4E9QAP7 1042 aaKnown RBP15.59■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Mier3Q3UHF3 551 aa15.59■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Csrnp2Q8BGQ2 534 aa15.59■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Ccdc113Q8C5T8 377 aa15.59■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Exoc3l2D3YUP5 789 aa15.59■□□□□ 0.09
Col5a1-201ENSMUST00000028280 MmeQ61391 750 aa15.59■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Zc4h2Q68FG0 224 aa15.59■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Kdm2bQ6P1G2 1309 aa15.59■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Ccpg1Q640L3 753 aa15.59■□□□□ 0.09
Col5a1-201ENSMUST00000028280 Dclk3Q8BWQ5 790 aa15.59■□□□□ 0.09
Retrieved 100 of 22,080 RNA–protein pairs in 19.7 ms