RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 CtifQ6PEE2 600 aaKnown RBP21.46■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Ano10Q8BH79 659 aa21.46■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Q8BZJ8 459 aa21.46■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Smc4Q8CG47 1286 aa21.46■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Plekhd1B2RPU2 505 aa21.46■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Col3a1P08121 1464 aa21.46■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 Tcof1O08784 1320 aaKnown RBP21.46■■□□□ 1.03
Ccdc3-201ENSMUST00000027988 U2af2P26369 475 aaKnown RBP21.45■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Ccnl1Q52KE7 532 aaKnown RBP21.45■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Itga6Q61739 1091 aa21.45■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Fam170aQ66LM6 333 aa21.45■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 AbraQ8BUZ1 375 aa21.45■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Sil1Q9EPK6 465 aa21.45■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Carmil3Q3UFQ8 1375 aa21.44■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Mtx1P47802 317 aa21.44■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Nbr1P97432 988 aa21.44■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Lrrc2Q8VDB8 371 aa21.44■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Mei1Q9D4I2 1268 aa21.44■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Prkag3Q8BGM7 489 aa21.44■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Smim5Q8BT42 78 aa21.44■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Naa16Q9DBB4 864 aa21.44■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Gm45140A0A0N4SUM8 220 aa21.43■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Slu7Q8BHJ9 585 aa21.43■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Cdca8Q8BHX3 289 aa21.43■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Cep55Q8BT07 462 aa21.43■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Cnot6lQ8VEG6 555 aa21.43■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Mrps25Q9D125 171 aaKnown RBP21.43■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Sipa1l3G3X9J0 1776 aa21.43■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Crb1Q8VHS2 1405 aa21.43■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Cfap99A0A140LIX9 648 aa21.42■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Zbtb21E9Q444 1094 aa21.42■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Zkscan4Q5SZT6 480 aa21.42■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Kiaa0754Q69ZZ9 979 aa21.42■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Stk38Q91VJ4 465 aa21.42■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Appbp2Q9DAX9 585 aa21.42■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Large1Q9Z1M7 756 aa21.42■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Lipo1J3QME6 396 aa21.42■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Ppil4Q9CXG3 492 aaKnown RBP21.42■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Nfatc2ipO09130 412 aa21.42■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Frat1P70339 274 aa21.42■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Sptlc3Q8BG54 563 aa21.42■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Acnat2Q8BGG9 420 aa21.42■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Rapgef3Q8VCC8 918 aa21.42■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Dhx30Q99PU8 1217 aaKnown RBP21.42■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Myl10Q62082 202 aa21.41■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Pip4k2bQ80XI4 416 aa21.41■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Tpcn2Q8BWC0 731 aa21.41■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Zscan29E9Q5B4 869 aa21.41■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Ccng2O08918 344 aa21.41■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Sptlc2P97363 560 aaKnown RBP21.4■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Smg7Q5RJH6 1138 aaKnown RBP21.4■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Fsd2Q8BZ52 692 aa21.4■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Xpo4Q9ESJ0 1151 aa21.4■■□□□ 1.02
Ccdc3-201ENSMUST00000027988 Luzp1Q8R4U7 1068 aaKnown RBP21.39■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Cyp26a1O55127 497 aa21.39■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Lmod1Q8BVA4 595 aa21.39■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Kiaa1524Q8BWY9 907 aa21.39■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 DymQ8CHY3 669 aa21.39■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Nol10Q5RJG1 687 aaKnown RBP21.38■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Zfp202Q8C879 641 aa21.38■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Telo2Q9DC40 840 aaKnown RBP21.38■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Myh7Q91Z83 1935 aa21.38■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Samd1D3YXK1 519 aa21.38■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Gm20425E9Q035 978 aaKnown RBP21.38■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 SrprbP47758 269 aa21.38■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Pfkfb1P70266 471 aa21.38■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Epha2Q03145 977 aa21.38■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Nlrp9aQ66X03 949 aa21.38■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Chrna2Q91X60 512 aa21.38■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Pcdhb9E9Q5G2 828 aa21.37■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Cep135Q6P5D4 1140 aa21.37■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Ppp4r3bQ922R5 820 aa21.37■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Nip7Q9CXK8 180 aaKnown RBP21.37■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Cdc45Q9Z1X9 566 aa21.37■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Slfnl1Q8BHW9 410 aa21.36■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Vnn1Q9Z0K8 512 aa21.36■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Pard3Q99NH2 1333 aa21.36■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Lmod3E9QA62 571 aa21.36■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 ApobrQ8VBT6 942 aa21.36■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Lrrc59Q922Q8 307 aaKnown RBP21.36■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Gigyf1Q99MR1 1044 aaKnown RBP21.36■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Gm43638A0A0J9YU36 694 aa21.35■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Mctp2Q5RJH2 878 aa21.35■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Ranbp6Q8BIV3 1105 aa21.35■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Nop2Q922K7 793 aaKnown RBP21.35■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Acot9Q9R0X4 439 aaKnown RBP21.35■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Grin2dQ03391 1323 aa21.35■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Wdr19Q3UGF1 1341 aa21.35■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Bin2D3Z6Q9 489 aa21.35■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Zbtb38Q3LR78 1197 aa21.35■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Zfp91Q62511 572 aa21.35■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Fbxo2Q80UW2 297 aa21.35■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 ImmtQ8CAQ8 757 aaKnown RBP21.35■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 CpdO89001 1377 aa21.35■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Cyp3a59D3Z2W7 503 aa21.34■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Anks1aP59672 1150 aa21.34■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Prl2c1Q5SVL9 228 aa21.34■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Fam160b2Q80YR2 744 aa21.34■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Ints4Q8CIM8 964 aa21.34■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Yeats4Q9CR11 227 aaKnown RBP21.34■■□□□ 1.01
Retrieved 100 of 22,080 RNA–protein pairs in 30.9 ms