RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Ftl2P49945 183 aa19.15■□□□□ 0.66
Shh-201ENSMUST00000002708 Ano10Q8BH79 659 aa19.15■□□□□ 0.66
Shh-201ENSMUST00000002708 Slu7Q8BHJ9 585 aa19.15■□□□□ 0.66
Shh-201ENSMUST00000002708 Zkscan8Q8BSL0 588 aa19.15■□□□□ 0.66
Shh-201ENSMUST00000002708 Adam1bQ8R534 806 aa19.15■□□□□ 0.66
Shh-201ENSMUST00000002708 BrapQ99MP8 591 aa19.15■□□□□ 0.66
Shh-201ENSMUST00000002708 Tomm22Q9CPQ3 142 aa19.15■□□□□ 0.66
Shh-201ENSMUST00000002708 Ccer1Q9CQL2 403 aa19.15■□□□□ 0.66
Shh-201ENSMUST00000002708 Nwd2Q6P5U7 1742 aa19.15■□□□□ 0.66
Shh-201ENSMUST00000002708 Atad2Q8CDM1 1040 aa19.15■□□□□ 0.66
Shh-201ENSMUST00000002708 Rufy2Q8R4C2 606 aa19.15■□□□□ 0.66
Shh-201ENSMUST00000002708 TrdnE9Q9K5 693 aa19.15■□□□□ 0.66
Shh-201ENSMUST00000002708 Stx1aO35526 288 aa19.15■□□□□ 0.66
Shh-201ENSMUST00000002708 Dync1i1O88485 628 aa19.15■□□□□ 0.66
Shh-201ENSMUST00000002708 Ehd2Q8BH64 543 aa19.15■□□□□ 0.66
Shh-201ENSMUST00000002708 Shisa4Q8CA71 197 aa19.15■□□□□ 0.66
Shh-201ENSMUST00000002708 Cyp3a57D3YYZ0 503 aa19.14■□□□□ 0.65
Shh-201ENSMUST00000002708 TsksO54887 585 aa19.14■□□□□ 0.65
Shh-201ENSMUST00000002708 Gpr182P43142 395 aa19.14■□□□□ 0.65
Shh-201ENSMUST00000002708 L1td1Q587J6 782 aaKnown RBP19.14■□□□□ 0.65
Shh-201ENSMUST00000002708 Zkscan4Q5SZT6 480 aa19.14■□□□□ 0.65
Shh-201ENSMUST00000002708 Ubxn4Q8VCH8 506 aa19.14■□□□□ 0.65
Shh-201ENSMUST00000002708 Gm29094F6Q785 221 aa19.13■□□□□ 0.65
Shh-201ENSMUST00000002708 CebpaP53566 359 aa19.13■□□□□ 0.65
Shh-201ENSMUST00000002708 Gigyf1Q99MR1 1044 aaKnown RBP19.13■□□□□ 0.65
Shh-201ENSMUST00000002708 MthfsQ9D110 203 aa19.13■□□□□ 0.65
Shh-201ENSMUST00000002708 Clic4Q9QYB1 253 aa19.13■□□□□ 0.65
Shh-201ENSMUST00000002708 Mctp2Q5RJH2 878 aa19.13■□□□□ 0.65
Shh-201ENSMUST00000002708 Gnl3lQ6PGG6 577 aaKnown RBP19.12■□□□□ 0.65
Shh-201ENSMUST00000002708 Gpatch3Q8BIY1 525 aa19.12■□□□□ 0.65
Shh-201ENSMUST00000002708 Q8BZJ8 459 aa19.12■□□□□ 0.65
Shh-201ENSMUST00000002708 Col4a3bpQ9EQG9 624 aa19.12■□□□□ 0.65
Shh-201ENSMUST00000002708 Ubn2Q80WC1 1314 aa19.12■□□□□ 0.65
Shh-201ENSMUST00000002708 Ncaph2Q8BSP2 607 aa19.12■□□□□ 0.65
Shh-201ENSMUST00000002708 Myh7Q91Z83 1935 aa19.12■□□□□ 0.65
Shh-201ENSMUST00000002708 Rrp1P56183 494 aaKnown RBP19.11■□□□□ 0.65
Shh-201ENSMUST00000002708 Map10Q8BJS7 891 aa19.11■□□□□ 0.65
Shh-201ENSMUST00000002708 Nbr1P97432 988 aa19.11■□□□□ 0.65
Shh-201ENSMUST00000002708 Ift57Q8BXG3 429 aa19.11■□□□□ 0.65
Shh-201ENSMUST00000002708 Ppil4Q9CXG3 492 aaKnown RBP19.11■□□□□ 0.65
Shh-201ENSMUST00000002708 Vmn2r23E9PXI5 849 aa19.1■□□□□ 0.65
Shh-201ENSMUST00000002708 PappaQ8R4K8 1624 aa19.1■□□□□ 0.65
Shh-201ENSMUST00000002708 Terf2ipQ91VL8 393 aa19.1■□□□□ 0.65
Shh-201ENSMUST00000002708 Trim59Q922Y2 403 aa19.1■□□□□ 0.65
Shh-201ENSMUST00000002708 Hdac6Q9Z2V5 1149 aa19.1■□□□□ 0.65
Shh-201ENSMUST00000002708 MpndQ3TV65 487 aa19.1■□□□□ 0.65
Shh-201ENSMUST00000002708 Dcaf5Q80T85 946 aa19.1■□□□□ 0.65
Shh-201ENSMUST00000002708 CenpqQ9CPQ5 267 aa19.1■□□□□ 0.65
Shh-201ENSMUST00000002708 4930548H24RikQ9D496 437 aa19.1■□□□□ 0.65
Shh-201ENSMUST00000002708 Pde3aQ9Z0X4 1141 aa19.1■□□□□ 0.65
Shh-201ENSMUST00000002708 Arap2Q8BZ05 1703 aa19.09■□□□□ 0.65
Shh-201ENSMUST00000002708 Samsn1P57725 372 aa19.09■□□□□ 0.65
Shh-201ENSMUST00000002708 Taf3Q5HZG4 932 aa19.09■□□□□ 0.65
Shh-201ENSMUST00000002708 SdsQ8VBT2 327 aa19.09■□□□□ 0.65
Shh-201ENSMUST00000002708 Ppp4r3bQ922R5 820 aa19.09■□□□□ 0.65
Shh-201ENSMUST00000002708 Mrps25Q9D125 171 aaKnown RBP19.09■□□□□ 0.65
Shh-201ENSMUST00000002708 Xpo4Q9ESJ0 1151 aa19.09■□□□□ 0.65
Shh-201ENSMUST00000002708 Elf2Q9JHC9 593 aa19.09■□□□□ 0.65
Shh-201ENSMUST00000002708 Myh1Q5SX40 1942 aa19.09■□□□□ 0.65
Shh-201ENSMUST00000002708 Znf568E9PYI1 671 aa19.09■□□□□ 0.65
Shh-201ENSMUST00000002708 Edrf1Q6GQV7 1239 aa19.09■□□□□ 0.65
Shh-201ENSMUST00000002708 Cops6O88545 324 aa19.08■□□□□ 0.65
Shh-201ENSMUST00000002708 Surf1P09925 306 aa19.08■□□□□ 0.65
Shh-201ENSMUST00000002708 Irx2P81066 474 aa19.08■□□□□ 0.65
Shh-201ENSMUST00000002708 Frat2Q8K025 231 aa19.08■□□□□ 0.65
Shh-201ENSMUST00000002708 Ddx54Q8K4L0 874 aaKnown RBP19.08■□□□□ 0.65
Shh-201ENSMUST00000002708 CerkQ8K4Q7 531 aa19.08■□□□□ 0.65
Shh-201ENSMUST00000002708 Emilin1Q99K41 1017 aa19.08■□□□□ 0.65
Shh-201ENSMUST00000002708 Tbc1d7Q9D0K0 293 aa19.08■□□□□ 0.65
Shh-201ENSMUST00000002708 Pald1P70261 859 aa19.08■□□□□ 0.64
Shh-201ENSMUST00000002708 Atp8a2P98200 1148 aa19.08■□□□□ 0.64
Shh-201ENSMUST00000002708 U2af1l4Q8BGJ9 220 aa19.08■□□□□ 0.64
Shh-201ENSMUST00000002708 Sec62Q8BU14 398 aaKnown RBP19.08■□□□□ 0.64
Shh-201ENSMUST00000002708 Ddx27Q921N6 760 aaKnown RBP19.08■□□□□ 0.64
Shh-201ENSMUST00000002708 Sept12Q9D451 317 aa19.08■□□□□ 0.64
Shh-201ENSMUST00000002708 Appbp2Q9DAX9 585 aa19.08■□□□□ 0.64
Shh-201ENSMUST00000002708 Plcb3P51432 1234 aaKnown RBP19.07■□□□□ 0.64
Shh-201ENSMUST00000002708 Zbtb1Q91VL9 713 aa19.07■□□□□ 0.64
Shh-201ENSMUST00000002708 Kdm3aQ6PCM1 1323 aa19.07■□□□□ 0.64
Shh-201ENSMUST00000002708 Tmem59lQ7TNI2 337 aa19.07■□□□□ 0.64
Shh-201ENSMUST00000002708 Otud6bQ8K2H2 294 aa19.07■□□□□ 0.64
Shh-201ENSMUST00000002708 Luzp1Q8R4U7 1068 aaKnown RBP19.07■□□□□ 0.64
Shh-201ENSMUST00000002708 Sik3Q6P4S6 1311 aa19.07■□□□□ 0.64
Shh-201ENSMUST00000002708 Dnajc25A2ALW5 357 aa19.06■□□□□ 0.64
Shh-201ENSMUST00000002708 Itga6Q61739 1091 aa19.06■□□□□ 0.64
Shh-201ENSMUST00000002708 Tcof1O08784 1320 aaKnown RBP19.06■□□□□ 0.64
Shh-201ENSMUST00000002708 Fam160b2Q80YR2 744 aa19.06■□□□□ 0.64
Shh-201ENSMUST00000002708 Cep55Q8BT07 462 aa19.06■□□□□ 0.64
Shh-201ENSMUST00000002708 Stk38Q91VJ4 465 aa19.06■□□□□ 0.64
Shh-201ENSMUST00000002708 Carmil3Q3UFQ8 1375 aa19.06■□□□□ 0.64
Shh-201ENSMUST00000002708 Zbtb21E9Q444 1094 aa19.06■□□□□ 0.64
Shh-201ENSMUST00000002708 Cyp2d9P11714 504 aa19.06■□□□□ 0.64
Shh-201ENSMUST00000002708 Nlrp9aQ66X03 949 aa19.06■□□□□ 0.64
Shh-201ENSMUST00000002708 Ddx41Q91VN6 622 aaKnown RBP19.06■□□□□ 0.64
Shh-201ENSMUST00000002708 Anks1aP59672 1150 aa19.05■□□□□ 0.64
Shh-201ENSMUST00000002708 LyarQ08288 388 aaKnown RBP19.05■□□□□ 0.64
Shh-201ENSMUST00000002708 Cers3Q1A3B0 383 aa19.05■□□□□ 0.64
Shh-201ENSMUST00000002708 Cyp7a1Q64505 503 aa19.05■□□□□ 0.64
Shh-201ENSMUST00000002708 Sptlc3Q8BG54 563 aa19.05■□□□□ 0.64
Shh-201ENSMUST00000002708 Kiaa1524Q8BWY9 907 aa19.05■□□□□ 0.64
Retrieved 100 of 22,080 RNA–protein pairs in 22.6 ms