RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 V9GY05 133 aa10.98□□□□□ -0.65
CCDC40-205ENST00000571028 MEX3AA1L020 520 aaKnown RBP10.97□□□□□ -0.65
CCDC40-205ENST00000571028 C22orf46C9J442 243 aa10.97□□□□□ -0.65
CCDC40-205ENST00000571028 OR2H2O95918 312 aa10.97□□□□□ -0.65
CCDC40-205ENST00000571028 CRYBA1P05813 215 aa10.97□□□□□ -0.65
CCDC40-205ENST00000571028 CLEC2LP0C7M8 214 aa10.97□□□□□ -0.65
CCDC40-205ENST00000571028 RAB3BP20337 219 aa10.97□□□□□ -0.65
CCDC40-205ENST00000571028 GALP22466 123 aa10.97□□□□□ -0.65
CCDC40-205ENST00000571028 HTR2CP28335 458 aa10.97□□□□□ -0.65
CCDC40-205ENST00000571028 FGF9P31371 208 aaPredicted RBP10.97□□□□□ -0.65
CCDC40-205ENST00000571028 TGFBR1P36897 503 aa10.97□□□□□ -0.65
CCDC40-205ENST00000571028 NPY4RP50391 375 aa10.97□□□□□ -0.65
CCDC40-205ENST00000571028 EDDM3BP56851 147 aa10.97□□□□□ -0.65
CCDC40-205ENST00000571028 GPR176Q14439 515 aa10.97□□□□□ -0.65
CCDC40-205ENST00000571028 EDDM3AQ14507 147 aa10.97□□□□□ -0.65
CCDC40-205ENST00000571028 SLC9A3R2Q15599 337 aa10.97□□□□□ -0.65
CCDC40-205ENST00000571028 RAB11BQ15907 218 aa10.97□□□□□ -0.65
CCDC40-205ENST00000571028 FBLN7Q53RD9 439 aa10.97□□□□□ -0.65
CCDC40-205ENST00000571028 OR10K2Q6IF99 312 aa10.97□□□□□ -0.65
CCDC40-205ENST00000571028 BTNL3Q6UXE8 466 aa10.97□□□□□ -0.65
CCDC40-205ENST00000571028 ASCL4Q6XD76 172 aa10.97□□□□□ -0.65
CCDC40-205ENST00000571028 CDH26Q8IXH8 852 aa10.97□□□□□ -0.65
CCDC40-205ENST00000571028 OSR2Q8N2R0 312 aa10.97□□□□□ -0.65
CCDC40-205ENST00000571028 ZNF561Q8N587 486 aa10.97□□□□□ -0.65
CCDC40-205ENST00000571028 WFDC12Q8WWY7 111 aa10.97□□□□□ -0.65
CCDC40-205ENST00000571028 RAB40AQ8WXH6 277 aa10.97□□□□□ -0.65
CCDC40-205ENST00000571028 TAF15Q92804 592 aaKnown RBP eCLIP10.97□□□□□ -0.65
CCDC40-205ENST00000571028 SDSLQ96GA7 329 aa10.97□□□□□ -0.65
CCDC40-205ENST00000571028 C1orf147Q96MC9 270 aaPredicted RBP10.97□□□□□ -0.65
CCDC40-205ENST00000571028 KCTD7Q96MP8 289 aa10.97□□□□□ -0.65
CCDC40-205ENST00000571028 NUDT16L1Q9BRJ7 211 aaKnown RBP10.97□□□□□ -0.65
CCDC40-205ENST00000571028 UQCC2Q9BRT2 126 aa10.97□□□□□ -0.65
CCDC40-205ENST00000571028 MRI1Q9BV20 369 aa10.97□□□□□ -0.65
CCDC40-205ENST00000571028 FUNDC2Q9BWH2 189 aa10.97□□□□□ -0.65
CCDC40-205ENST00000571028 DNTTIP1Q9H147 329 aa10.97□□□□□ -0.65
CCDC40-205ENST00000571028 BEX1Q9HBH7 125 aa10.97□□□□□ -0.65
CCDC40-205ENST00000571028 PCDHB16Q9NRJ7 776 aa10.97□□□□□ -0.65
CCDC40-205ENST00000571028 ST3GAL6Q9Y274 331 aa10.97□□□□□ -0.65
CCDC40-205ENST00000571028 AUP1Q9Y679 476 aa10.97□□□□□ -0.65
CCDC40-205ENST00000571028 TRAV1-2A0A0B4J238 106 aa10.96□□□□□ -0.65
CCDC40-205ENST00000571028 A0A1W2PQ09 198 aa10.96□□□□□ -0.65
CCDC40-205ENST00000571028 TMEM82A0PJX8 343 aa10.96□□□□□ -0.65
CCDC40-205ENST00000571028 A8MXK9 166 aa10.96□□□□□ -0.65
CCDC40-205ENST00000571028 MPIG6BO95866 241 aa10.96□□□□□ -0.65
CCDC40-205ENST00000571028 GTF2F2P13984 249 aa10.96□□□□□ -0.65
CCDC40-205ENST00000571028 CPT2P23786 658 aa10.96□□□□□ -0.65
CCDC40-205ENST00000571028 SDC2P34741 201 aa10.96□□□□□ -0.65
CCDC40-205ENST00000571028 BMXP51813 675 aa10.96□□□□□ -0.65
CCDC40-205ENST00000571028 CAV3P56539 151 aa10.96□□□□□ -0.65
CCDC40-205ENST00000571028 SRSF4Q08170 494 aaKnown RBP10.96□□□□□ -0.65
CCDC40-205ENST00000571028 SPIN3Q5JUX0 258 aa10.96□□□□□ -0.65
CCDC40-205ENST00000571028 C1orf100Q5SVJ3 147 aa10.96□□□□□ -0.65
CCDC40-205ENST00000571028 ATAD3CQ5T2N8 411 aa10.96□□□□□ -0.65
CCDC40-205ENST00000571028 CD276Q5ZPR3 534 aa10.96□□□□□ -0.65
CCDC40-205ENST00000571028 ELP2Q6IA86 826 aa10.96□□□□□ -0.65
CCDC40-205ENST00000571028 GPR141Q7Z602 305 aa10.96□□□□□ -0.65
CCDC40-205ENST00000571028 LYPD6Q86Y78 171 aa10.96□□□□□ -0.65
CCDC40-205ENST00000571028 C1QL4Q86Z23 238 aa10.96□□□□□ -0.65
CCDC40-205ENST00000571028 FAM185AQ8N0U4 392 aa10.96□□□□□ -0.65
CCDC40-205ENST00000571028 BCL6BQ8N143 479 aaPredicted RBP10.96□□□□□ -0.65
CCDC40-205ENST00000571028 TMEM104Q8NE00 496 aa10.96□□□□□ -0.65
CCDC40-205ENST00000571028 OR13F1Q8NGS4 319 aa10.96□□□□□ -0.65
CCDC40-205ENST00000571028 OR4F5Q8NH21 305 aa10.96□□□□□ -0.65
CCDC40-205ENST00000571028 TBC1D15Q8TC07 691 aa10.96□□□□□ -0.65
CCDC40-205ENST00000571028 SELENOIQ9C0D9 397 aa10.96□□□□□ -0.65
CCDC40-205ENST00000571028 IL36GQ9NZH8 169 aa10.96□□□□□ -0.65
CCDC40-205ENST00000571028 ZNF581Q9P0T4 197 aa10.96□□□□□ -0.65
CCDC40-205ENST00000571028 MMP24Q9Y5R2 645 aa10.96□□□□□ -0.65
CCDC40-205ENST00000571028 PPIAL4CA0A0B4J2A2 164 aa10.95□□□□□ -0.66
CCDC40-205ENST00000571028 IGHV2-70DA0A0C4DH43 119 aa10.95□□□□□ -0.66
CCDC40-205ENST00000571028 SLC17A2O00624 439 aa10.95□□□□□ -0.66
CCDC40-205ENST00000571028 PSPNO60542 156 aa10.95□□□□□ -0.66
CCDC40-205ENST00000571028 ZNF780AO75290 641 aaPredicted RBP10.95□□□□□ -0.66
CCDC40-205ENST00000571028 OR7C1O76099 320 aaPredicted RBP10.95□□□□□ -0.66
CCDC40-205ENST00000571028 TK1P04183 234 aa10.95□□□□□ -0.66
CCDC40-205ENST00000571028 TFAP2AP05549 437 aa10.95□□□□□ -0.66
CCDC40-205ENST00000571028 SLC2A2P11168 524 aaPredicted RBP10.95□□□□□ -0.66
CCDC40-205ENST00000571028 MGMTP16455 207 aa10.95□□□□□ -0.66
CCDC40-205ENST00000571028 RBM11P57052 281 aaKnown RBP10.95□□□□□ -0.66
CCDC40-205ENST00000571028 ZNF146Q15072 292 aa10.95□□□□□ -0.66
CCDC40-205ENST00000571028 GRK1Q15835 563 aa10.95□□□□□ -0.66
CCDC40-205ENST00000571028 TAF9Q16594 264 aa10.95□□□□□ -0.66
CCDC40-205ENST00000571028 TIMM50Q3ZCQ8 353 aa10.95□□□□□ -0.66
CCDC40-205ENST00000571028 GPR107Q5VW38 600 aa10.95□□□□□ -0.66
CCDC40-205ENST00000571028 C16orf87Q6PH81 154 aa10.95□□□□□ -0.66
CCDC40-205ENST00000571028 GDPD3Q7L5L3 318 aa10.95□□□□□ -0.66
CCDC40-205ENST00000571028 KIR3DL3Q8N743 410 aa10.95□□□□□ -0.66
CCDC40-205ENST00000571028 TPRX1Q8N7U7 411 aa10.95□□□□□ -0.66
CCDC40-205ENST00000571028 OR4S1Q8NGB4 309 aa10.95□□□□□ -0.66
CCDC40-205ENST00000571028 OR51D1Q8NGF3 324 aa10.95□□□□□ -0.66
CCDC40-205ENST00000571028 OR6M1Q8NGM8 313 aa10.95□□□□□ -0.66
CCDC40-205ENST00000571028 SNX22Q96L94 193 aa10.95□□□□□ -0.66
CCDC40-205ENST00000571028 ZNF48Q96MX3 618 aaPredicted RBP10.95□□□□□ -0.66
CCDC40-205ENST00000571028 NAA50Q9GZZ1 169 aaKnown RBP10.95□□□□□ -0.66
CCDC40-205ENST00000571028 PPA2Q9H2U2 334 aa10.95□□□□□ -0.66
CCDC40-205ENST00000571028 RHOFQ9HBH0 211 aa10.95□□□□□ -0.66
CCDC40-205ENST00000571028 ONECUT1Q9UBC0 465 aa10.95□□□□□ -0.66
CCDC40-205ENST00000571028 INSIG2Q9Y5U4 225 aa10.95□□□□□ -0.66
CCDC40-205ENST00000571028 A0A0B4J203 849 aa10.94□□□□□ -0.66
CCDC40-205ENST00000571028 K7N7A8 449 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms