RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 H3BSH0 61 aa7.88□□□□□ -1.15
SMARCB1-206ENST00000477836 XRCC2O43543 280 aa7.88□□□□□ -1.15
SMARCB1-206ENST00000477836 SYT7O43581 403 aa7.88□□□□□ -1.15
SMARCB1-206ENST00000477836 SC5DO75845 299 aa7.88□□□□□ -1.15
SMARCB1-206ENST00000477836 CALRP27797 417 aaKnown RBP7.88□□□□□ -1.15
SMARCB1-206ENST00000477836 SAA4P35542 130 aa7.88□□□□□ -1.15
SMARCB1-206ENST00000477836 SOX2P48431 317 aa7.88□□□□□ -1.15
SMARCB1-206ENST00000477836 MTNR1BP49286 362 aa7.88□□□□□ -1.15
SMARCB1-206ENST00000477836 DLX1P56177 255 aa7.88□□□□□ -1.15
SMARCB1-206ENST00000477836 RPS11P62280 158 aaKnown RBP eCLIP7.88□□□□□ -1.15
SMARCB1-206ENST00000477836 GUCA2AQ02747 115 aa7.88□□□□□ -1.15
SMARCB1-206ENST00000477836 KLRD1Q13241 179 aa7.88□□□□□ -1.15
SMARCB1-206ENST00000477836 SNAI3Q3KNW1 292 aa7.88□□□□□ -1.15
SMARCB1-206ENST00000477836 HSD17B12Q53GQ0 312 aa7.88□□□□□ -1.15
SMARCB1-206ENST00000477836 SFRP4Q6FHJ7 346 aaPredicted RBP7.88□□□□□ -1.15
SMARCB1-206ENST00000477836 TMEM91Q6ZNR0 172 aa7.88□□□□□ -1.15
SMARCB1-206ENST00000477836 RDH10Q8IZV5 341 aa7.88□□□□□ -1.15
SMARCB1-206ENST00000477836 OR51A4Q8NGJ6 313 aa7.88□□□□□ -1.15
SMARCB1-206ENST00000477836 OR10AC1Q8NH08 325 aa7.88□□□□□ -1.15
SMARCB1-206ENST00000477836 WIPF2Q8TF74 440 aaPredicted RBP7.88□□□□□ -1.15
SMARCB1-206ENST00000477836 PHYHIPQ92561 330 aa7.88□□□□□ -1.15
SMARCB1-206ENST00000477836 TMEM106AQ96A25 262 aa7.88□□□□□ -1.15
SMARCB1-206ENST00000477836 APOBEC3DQ96AK3 386 aaPredicted RBP7.88□□□□□ -1.15
SMARCB1-206ENST00000477836 HAVCR1Q96D42 359 aa7.88□□□□□ -1.15
SMARCB1-206ENST00000477836 DERL3Q96Q80 235 aa7.88□□□□□ -1.15
SMARCB1-206ENST00000477836 DCUN1D5Q9BTE7 237 aa7.88□□□□□ -1.15
SMARCB1-206ENST00000477836 FAM234AQ9H0X4 552 aa7.88□□□□□ -1.15
SMARCB1-206ENST00000477836 RGCCQ9H4X1 137 aa7.88□□□□□ -1.15
SMARCB1-206ENST00000477836 RNF167Q9H6Y7 350 aa7.88□□□□□ -1.15
SMARCB1-206ENST00000477836 GPR84Q9NQS5 396 aa7.88□□□□□ -1.15
SMARCB1-206ENST00000477836 CKLFQ9UBR5 152 aa7.88□□□□□ -1.15
SMARCB1-206ENST00000477836 ZNF391Q9UJN7 358 aa7.88□□□□□ -1.15
SMARCB1-206ENST00000477836 J3QW42 95 aa7.87□□□□□ -1.15
SMARCB1-206ENST00000477836 MLNRO43193 412 aa7.87□□□□□ -1.15
SMARCB1-206ENST00000477836 CDRT1O95170 752 aa7.87□□□□□ -1.15
SMARCB1-206ENST00000477836 UCHL1P09936 223 aa7.87□□□□□ -1.15
SMARCB1-206ENST00000477836 ZNF20P17024 532 aa7.87□□□□□ -1.15
SMARCB1-206ENST00000477836 CCL1P22362 96 aa7.87□□□□□ -1.15
SMARCB1-206ENST00000477836 TUBG1P23258 451 aa7.87□□□□□ -1.15
SMARCB1-206ENST00000477836 CFL1P23528 166 aaKnown RBP7.87□□□□□ -1.15
SMARCB1-206ENST00000477836 TGFBR1P36897 503 aa7.87□□□□□ -1.15
SMARCB1-206ENST00000477836 MALLQ13021 153 aa7.87□□□□□ -1.15
SMARCB1-206ENST00000477836 KCNJ8Q15842 424 aa7.87□□□□□ -1.15
SMARCB1-206ENST00000477836 RSPO1Q2MKA7 263 aaPredicted RBP7.87□□□□□ -1.15
SMARCB1-206ENST00000477836 GLYATL3Q5SZD4 288 aa7.87□□□□□ -1.15
SMARCB1-206ENST00000477836 FAM27D1Q5T7N8 215 aa7.87□□□□□ -1.15
SMARCB1-206ENST00000477836 CRIP3Q6Q6R5 217 aa7.87□□□□□ -1.15
SMARCB1-206ENST00000477836 METAP1DQ6UB28 335 aaPredicted RBP7.87□□□□□ -1.15
SMARCB1-206ENST00000477836 BEND2Q8NDZ0 799 aa7.87□□□□□ -1.15
SMARCB1-206ENST00000477836 CCDC54Q8NEL0 328 aa7.87□□□□□ -1.15
SMARCB1-206ENST00000477836 OR13G1Q8NGZ3 307 aa7.87□□□□□ -1.15
SMARCB1-206ENST00000477836 ST8SIA4Q92187 359 aa7.87□□□□□ -1.15
SMARCB1-206ENST00000477836 REEP6Q96HR9 211 aa7.87□□□□□ -1.15
SMARCB1-206ENST00000477836 GPR61Q9BZJ8 451 aa7.87□□□□□ -1.15
SMARCB1-206ENST00000477836 OPA3Q9H6K4 179 aa7.87□□□□□ -1.15
SMARCB1-206ENST00000477836 ZNF702PQ9H963 129 aa7.87□□□□□ -1.15
SMARCB1-206ENST00000477836 TUBG2Q9NRH3 451 aa7.87□□□□□ -1.15
SMARCB1-206ENST00000477836 TBCCD1Q9NVR7 557 aa7.87□□□□□ -1.15
SMARCB1-206ENST00000477836 CCDC59Q9P031 241 aaKnown RBP7.87□□□□□ -1.15
SMARCB1-206ENST00000477836 STARD10Q9Y365 291 aa7.87□□□□□ -1.15
SMARCB1-206ENST00000477836 TRBV5-7A0A0A0MS05 114 aa7.86□□□□□ -1.15
SMARCB1-206ENST00000477836 CHST1O43916 411 aa7.86□□□□□ -1.15
SMARCB1-206ENST00000477836 MTRF1O75570 445 aaKnown RBP7.86□□□□□ -1.15
SMARCB1-206ENST00000477836 FCN3O75636 299 aa7.86□□□□□ -1.15
SMARCB1-206ENST00000477836 DHRS3O75911 302 aa7.86□□□□□ -1.15
SMARCB1-206ENST00000477836 ECDO95905 644 aaPredicted RBP7.86□□□□□ -1.15
SMARCB1-206ENST00000477836 IL1AP01583 271 aa7.86□□□□□ -1.15
SMARCB1-206ENST00000477836 IGLV3-1P01715 115 aa7.86□□□□□ -1.15
SMARCB1-206ENST00000477836 ZNF182P17025 639 aaPredicted RBP7.86□□□□□ -1.15
SMARCB1-206ENST00000477836 FSTP19883 344 aa7.86□□□□□ -1.15
SMARCB1-206ENST00000477836 ANOS1P23352 680 aa7.86□□□□□ -1.15
SMARCB1-206ENST00000477836 SOX6P35712 828 aa7.86□□□□□ -1.15
SMARCB1-206ENST00000477836 PPP3R1P63098 170 aa7.86□□□□□ -1.15
SMARCB1-206ENST00000477836 MXD1Q05195 221 aa7.86□□□□□ -1.15
SMARCB1-206ENST00000477836 OR2T2Q6IF00 324 aa7.86□□□□□ -1.15
SMARCB1-206ENST00000477836 COLCA1Q6ZS62 124 aa7.86□□□□□ -1.15
SMARCB1-206ENST00000477836 MRPL21Q7Z2W9 205 aaKnown RBP7.86□□□□□ -1.15
SMARCB1-206ENST00000477836 NAA40Q86UY6 237 aa7.86□□□□□ -1.15
SMARCB1-206ENST00000477836 BOLLQ8N9W6 283 aaKnown RBP7.86□□□□□ -1.15
SMARCB1-206ENST00000477836 OR8G5Q8NG78 346 aa7.86□□□□□ -1.15
SMARCB1-206ENST00000477836 OR11L1Q8NGX0 322 aa7.86□□□□□ -1.15
SMARCB1-206ENST00000477836 OR2AE1Q8NHA4 323 aa7.86□□□□□ -1.15
SMARCB1-206ENST00000477836 C8orf46Q8TAG6 207 aa7.86□□□□□ -1.15
SMARCB1-206ENST00000477836 DYNC2LI1Q8TCX1 351 aa7.86□□□□□ -1.15
SMARCB1-206ENST00000477836 C17orf50Q8WW18 174 aa7.86□□□□□ -1.15
SMARCB1-206ENST00000477836 SNTG1Q9NSN8 517 aa7.86□□□□□ -1.15
SMARCB1-206ENST00000477836 ZNF319Q9P2F9 582 aa7.86□□□□□ -1.15
SMARCB1-206ENST00000477836 ALMS1Q8TCU4 4167 aa7.85□□□□□ -1.15
SMARCB1-206ENST00000477836 TRAV1-2A0A0B4J238 106 aa7.85□□□□□ -1.15
SMARCB1-206ENST00000477836 A0A1B0GTI1 187 aa7.85□□□□□ -1.15
SMARCB1-206ENST00000477836 hCG_38984A0A1B0GV85 526 aa7.85□□□□□ -1.15
SMARCB1-206ENST00000477836 A0A1W2PPK0 400 aa7.85□□□□□ -1.15
SMARCB1-206ENST00000477836 MEGF11A6BM72 1044 aa7.85□□□□□ -1.15
SMARCB1-206ENST00000477836 DHRS7CA6NNS2 312 aa7.85□□□□□ -1.15
SMARCB1-206ENST00000477836 DVL1O14640 695 aa7.85□□□□□ -1.15
SMARCB1-206ENST00000477836 PDCD5O14737 125 aa7.85□□□□□ -1.15
SMARCB1-206ENST00000477836 GYPAP02724 150 aa7.85□□□□□ -1.15
SMARCB1-206ENST00000477836 RAC2P15153 192 aa7.85□□□□□ -1.15
SMARCB1-206ENST00000477836 PAX6P26367 422 aa7.85□□□□□ -1.15
SMARCB1-206ENST00000477836 SDC2P34741 201 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms