RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 PSORS1C1Q9UIG5 152 aa12.51□□□□□ -0.41
RAB4B-202ENST00000378307 ZNF281Q9Y2X9 895 aa12.51□□□□□ -0.41
RAB4B-202ENST00000378307 NBEAL1Q6ZS30 2694 aa12.5□□□□□ -0.41
RAB4B-202ENST00000378307 IRGMA1A4Y4 181 aa12.5□□□□□ -0.41
RAB4B-202ENST00000378307 GABRPO00591 440 aa12.5□□□□□ -0.41
RAB4B-202ENST00000378307 MMP23AO75900 390 aa12.5□□□□□ -0.41
RAB4B-202ENST00000378307 RPSAP08865 295 aaKnown RBP12.5□□□□□ -0.41
RAB4B-202ENST00000378307 ZNF728P0DKX0 622 aa12.5□□□□□ -0.41
RAB4B-202ENST00000378307 TMEM225BP0DP42 221 aa12.5□□□□□ -0.41
RAB4B-202ENST00000378307 LMO1P25800 156 aa12.5□□□□□ -0.41
RAB4B-202ENST00000378307 SLC34A1Q06495 639 aa12.5□□□□□ -0.41
RAB4B-202ENST00000378307 SRSF4Q08170 494 aaKnown RBP12.5□□□□□ -0.41
RAB4B-202ENST00000378307 SPIN3Q5JUX0 258 aa12.5□□□□□ -0.41
RAB4B-202ENST00000378307 SAXO1Q8IYX7 474 aa12.5□□□□□ -0.41
RAB4B-202ENST00000378307 BEND2Q8NDZ0 799 aa12.5□□□□□ -0.41
RAB4B-202ENST00000378307 OR52N1Q8NH53 320 aa12.5□□□□□ -0.41
RAB4B-202ENST00000378307 GHSRQ92847 366 aa12.5□□□□□ -0.41
RAB4B-202ENST00000378307 TMEM106AQ96A25 262 aa12.5□□□□□ -0.41
RAB4B-202ENST00000378307 SMIM19Q96E16 107 aa12.5□□□□□ -0.41
RAB4B-202ENST00000378307 PGLYRP3Q96LB9 341 aa12.5□□□□□ -0.41
RAB4B-202ENST00000378307 DPAGT1Q9H3H5 408 aa12.5□□□□□ -0.41
RAB4B-202ENST00000378307 HEXA-AS1Q9H8Q6 139 aa12.5□□□□□ -0.41
RAB4B-202ENST00000378307 PLCXD1Q9NUJ7 323 aa12.5□□□□□ -0.41
RAB4B-202ENST00000378307 FKBP14Q9NWM8 211 aa12.5□□□□□ -0.41
RAB4B-202ENST00000378307 A0A0G2JK05 382 aa12.49□□□□□ -0.41
RAB4B-202ENST00000378307 TRBV5-5A0A0J9YX44 114 aa12.49□□□□□ -0.41
RAB4B-202ENST00000378307 A0A1W2PPH5 198 aa12.49□□□□□ -0.41
RAB4B-202ENST00000378307 MEGF11A6BM72 1044 aa12.49□□□□□ -0.41
RAB4B-202ENST00000378307 SH2D1BO14796 132 aa12.49□□□□□ -0.41
RAB4B-202ENST00000378307 RAB3AP20336 220 aa12.49□□□□□ -0.41
RAB4B-202ENST00000378307 RAG2P55895 527 aa12.49□□□□□ -0.41
RAB4B-202ENST00000378307 KRTAP10-3P60369 221 aa12.49□□□□□ -0.41
RAB4B-202ENST00000378307 MEF2CQ06413 473 aaPredicted RBP12.49□□□□□ -0.41
RAB4B-202ENST00000378307 SCN1BQ07699 218 aa12.49□□□□□ -0.41
RAB4B-202ENST00000378307 MIDNQ504T8 468 aa12.49□□□□□ -0.41
RAB4B-202ENST00000378307 BAIAP2L2Q6UXY1 529 aa12.49□□□□□ -0.41
RAB4B-202ENST00000378307 AHSA2Q719I0 299 aa12.49□□□□□ -0.41
RAB4B-202ENST00000378307 SATL1Q86VE3 508 aa12.49□□□□□ -0.41
RAB4B-202ENST00000378307 ZSCAN4Q8NAM6 433 aaPredicted RBP12.49□□□□□ -0.41
RAB4B-202ENST00000378307 OR10K1Q8NGX5 313 aa12.49□□□□□ -0.41
RAB4B-202ENST00000378307 SGCDQ92629 289 aa12.49□□□□□ -0.41
RAB4B-202ENST00000378307 ZNF714Q96N38 554 aa12.49□□□□□ -0.41
RAB4B-202ENST00000378307 MEGF9Q9H1U4 602 aa12.49□□□□□ -0.41
RAB4B-202ENST00000378307 PPA2Q9H2U2 334 aa12.49□□□□□ -0.41
RAB4B-202ENST00000378307 EXOSC4Q9NPD3 245 aaKnown RBP12.49□□□□□ -0.41
RAB4B-202ENST00000378307 CNOT2Q9NZN8 540 aaKnown RBP12.49□□□□□ -0.41
RAB4B-202ENST00000378307 ZNF581Q9P0T4 197 aa12.49□□□□□ -0.41
RAB4B-202ENST00000378307 MMP24Q9Y5R2 645 aa12.49□□□□□ -0.41
RAB4B-202ENST00000378307 PNMA8CA0A1B0GUJ8 204 aa12.48□□□□□ -0.41
RAB4B-202ENST00000378307 A0A1W2PPK0 400 aa12.48□□□□□ -0.41
RAB4B-202ENST00000378307 MAGEA13PA6NCF6 341 aa12.48□□□□□ -0.41
RAB4B-202ENST00000378307 EFCAB10A6NFE3 127 aa12.48□□□□□ -0.41
RAB4B-202ENST00000378307 ERICH4A6NGS2 130 aa12.48□□□□□ -0.41
RAB4B-202ENST00000378307 SLC33A1O00400 549 aaPredicted RBP12.48□□□□□ -0.41
RAB4B-202ENST00000378307 MGST3O14880 152 aa12.48□□□□□ -0.41
RAB4B-202ENST00000378307 NDUFA7O95182 113 aa12.48□□□□□ -0.41
RAB4B-202ENST00000378307 PAHP00439 452 aa12.48□□□□□ -0.41
RAB4B-202ENST00000378307 CRYBA1P05813 215 aa12.48□□□□□ -0.41
RAB4B-202ENST00000378307 IGHV1-8P0DP01 117 aa12.48□□□□□ -0.41
RAB4B-202ENST00000378307 OR3A4PP47883 348 aa12.48□□□□□ -0.41
RAB4B-202ENST00000378307 GLIPR1P48060 266 aa12.48□□□□□ -0.41
RAB4B-202ENST00000378307 AQP4P55087 323 aa12.48□□□□□ -0.41
RAB4B-202ENST00000378307 AESQ08117 197 aa12.48□□□□□ -0.41
RAB4B-202ENST00000378307 Q6ZSV7 163 aa12.48□□□□□ -0.41
RAB4B-202ENST00000378307 NANOGP1Q8N7R0 232 aa12.48□□□□□ -0.41
RAB4B-202ENST00000378307 PIFOQ8TCI5 191 aa12.48□□□□□ -0.41
RAB4B-202ENST00000378307 TNFAIP8L1Q8WVP5 186 aa12.48□□□□□ -0.41
RAB4B-202ENST00000378307 NR1H4Q96RI1 486 aaPredicted RBP12.48□□□□□ -0.41
RAB4B-202ENST00000378307 SSX3Q99909 188 aa12.48□□□□□ -0.41
RAB4B-202ENST00000378307 CHCHD3Q9NX63 227 aaKnown RBP12.48□□□□□ -0.41
RAB4B-202ENST00000378307 VPREB3Q9UKI3 123 aa12.48□□□□□ -0.41
RAB4B-202ENST00000378307 LINC00312Q9Y6C7 94 aa12.48□□□□□ -0.41
RAB4B-202ENST00000378307 PKD1L1Q8TDX9 2849 aa12.47□□□□□ -0.41
RAB4B-202ENST00000378307 TRAV8-7A0A075B6U6 113 aa12.47□□□□□ -0.41
RAB4B-202ENST00000378307 hCG_1809904A0A1W2PP81 198 aa12.47□□□□□ -0.41
RAB4B-202ENST00000378307 A0A1W2PPE2 198 aa12.47□□□□□ -0.41
RAB4B-202ENST00000378307 A0A1W2PR64 198 aa12.47□□□□□ -0.41
RAB4B-202ENST00000378307 A0A1W2PRV1 198 aa12.47□□□□□ -0.41
RAB4B-202ENST00000378307 hADV38S2A0JD32 116 aa12.47□□□□□ -0.41
RAB4B-202ENST00000378307 FAM90A8PA6NJQ4 464 aa12.47□□□□□ -0.41
RAB4B-202ENST00000378307 POM121CA8CG34 1229 aa12.47□□□□□ -0.41
RAB4B-202ENST00000378307 ODF3BA8MYP8 253 aa12.47□□□□□ -0.41
RAB4B-202ENST00000378307 H3BUX3 64 aa12.47□□□□□ -0.41
RAB4B-202ENST00000378307 CDRT1O95170 752 aa12.47□□□□□ -0.41
RAB4B-202ENST00000378307 CD2P06729 351 aa12.47□□□□□ -0.41
RAB4B-202ENST00000378307 ZNF44P15621 663 aa12.47□□□□□ -0.41
RAB4B-202ENST00000378307 IGFBP3P17936 291 aaPredicted RBP12.47□□□□□ -0.41
RAB4B-202ENST00000378307 ERP29P30040 261 aaKnown RBP12.47□□□□□ -0.41
RAB4B-202ENST00000378307 P2RX3P56373 397 aa12.47□□□□□ -0.41
RAB4B-202ENST00000378307 GABPB1Q06547 395 aaPredicted RBP12.47□□□□□ -0.41
RAB4B-202ENST00000378307 LY6EQ16553 131 aa12.47□□□□□ -0.41
RAB4B-202ENST00000378307 ELP2Q6IA86 826 aa12.47□□□□□ -0.41
RAB4B-202ENST00000378307 SHISA2Q6UWI4 295 aa12.47□□□□□ -0.41
RAB4B-202ENST00000378307 ASCL4Q6XD76 172 aa12.47□□□□□ -0.41
RAB4B-202ENST00000378307 STX19Q8N4C7 294 aa12.47□□□□□ -0.41
RAB4B-202ENST00000378307 PXT1Q8NFP0 134 aa12.47□□□□□ -0.41
RAB4B-202ENST00000378307 LINC01006Q8NI28 216 aa12.47□□□□□ -0.41
RAB4B-202ENST00000378307 COQ2Q96H96 371 aa12.47□□□□□ -0.41
RAB4B-202ENST00000378307 GPER1Q99527 375 aa12.47□□□□□ -0.41
RAB4B-202ENST00000378307 RHOFQ9HBH0 211 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms