RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 FAM90A15PP0C7V4 464 aa11.52□□□□□ -0.57
NSMCE1-201ENST00000361439 FAM90A13PP0C7W8 464 aa11.52□□□□□ -0.57
NSMCE1-201ENST00000361439 FAM90A14PP0C7W9 464 aa11.52□□□□□ -0.57
NSMCE1-201ENST00000361439 FAM90A24PP0C7X0 464 aa11.52□□□□□ -0.57
NSMCE1-201ENST00000361439 PRKACAP17612 351 aa11.52□□□□□ -0.57
NSMCE1-201ENST00000361439 LMO1P25800 156 aa11.52□□□□□ -0.57
NSMCE1-201ENST00000361439 RBMXP38159 391 aaKnown RBP11.52□□□□□ -0.57
NSMCE1-201ENST00000361439 CAV3P56539 151 aa11.52□□□□□ -0.57
NSMCE1-201ENST00000361439 GMFBP60983 142 aa11.52□□□□□ -0.57
NSMCE1-201ENST00000361439 HOXA4Q00056 320 aaPredicted RBP11.52□□□□□ -0.57
NSMCE1-201ENST00000361439 LRRC10Q5BKY1 277 aa11.52□□□□□ -0.57
NSMCE1-201ENST00000361439 CD276Q5ZPR3 534 aa11.52□□□□□ -0.57
NSMCE1-201ENST00000361439 ZNF841Q6ZN19 808 aa11.52□□□□□ -0.57
NSMCE1-201ENST00000361439 BIVMQ86UB2 503 aa11.52□□□□□ -0.57
NSMCE1-201ENST00000361439 CROCCP3Q8IVE0 287 aa11.52□□□□□ -0.57
NSMCE1-201ENST00000361439 OSR2Q8N2R0 312 aa11.52□□□□□ -0.57
NSMCE1-201ENST00000361439 C19orf18Q8NEA5 215 aa11.52□□□□□ -0.57
NSMCE1-201ENST00000361439 KCNG3Q8TAE7 436 aa11.52□□□□□ -0.57
NSMCE1-201ENST00000361439 SEH1LQ96EE3 360 aa11.52□□□□□ -0.57
NSMCE1-201ENST00000361439 C1orf147Q96MC9 270 aaPredicted RBP11.52□□□□□ -0.57
NSMCE1-201ENST00000361439 GFI1Q99684 422 aa11.52□□□□□ -0.57
NSMCE1-201ENST00000361439 CENPOQ9BU64 300 aa11.52□□□□□ -0.57
NSMCE1-201ENST00000361439 SSBP3Q9BWW4 388 aaPredicted RBP11.52□□□□□ -0.57
NSMCE1-201ENST00000361439 IFT22Q9H7X7 185 aa11.52□□□□□ -0.57
NSMCE1-201ENST00000361439 PLGRKTQ9HBL7 147 aa11.52□□□□□ -0.57
NSMCE1-201ENST00000361439 FBLN5Q9UBX5 448 aa11.52□□□□□ -0.57
NSMCE1-201ENST00000361439 CLN8Q9UBY8 286 aa11.52□□□□□ -0.57
NSMCE1-201ENST00000361439 STEAP1Q9UHE8 339 aa11.52□□□□□ -0.57
NSMCE1-201ENST00000361439 ACANP16112 2415 aa11.51□□□□□ -0.57
NSMCE1-201ENST00000361439 SHISA3A0PJX4 238 aa11.51□□□□□ -0.57
NSMCE1-201ENST00000361439 NDUFB3O43676 98 aa11.51□□□□□ -0.57
NSMCE1-201ENST00000361439 HTR3BO95264 441 aa11.51□□□□□ -0.57
NSMCE1-201ENST00000361439 HAND1O96004 215 aa11.51□□□□□ -0.57
NSMCE1-201ENST00000361439 IGHV4-31P0DP07 118 aa11.51□□□□□ -0.57
NSMCE1-201ENST00000361439 ARSBP15848 533 aa11.51□□□□□ -0.57
NSMCE1-201ENST00000361439 AMY2BP19961 511 aa11.51□□□□□ -0.57
NSMCE1-201ENST00000361439 GATA3P23771 443 aa11.51□□□□□ -0.57
NSMCE1-201ENST00000361439 IL2RGP31785 369 aa11.51□□□□□ -0.57
NSMCE1-201ENST00000361439 SDC2P34741 201 aa11.51□□□□□ -0.57
NSMCE1-201ENST00000361439 GNB2P62879 340 aa11.51□□□□□ -0.57
NSMCE1-201ENST00000361439 FAM189A2Q15884 450 aa11.51□□□□□ -0.57
NSMCE1-201ENST00000361439 RAB11BQ15907 218 aa11.51□□□□□ -0.57
NSMCE1-201ENST00000361439 SLC22A6Q4U2R8 563 aa11.51□□□□□ -0.57
NSMCE1-201ENST00000361439 WDR25Q64LD2 544 aaPredicted RBP11.51□□□□□ -0.57
NSMCE1-201ENST00000361439 LYPD2Q6UXB3 125 aa11.51□□□□□ -0.57
NSMCE1-201ENST00000361439 OR2W3Q7Z3T1 314 aa11.51□□□□□ -0.57
NSMCE1-201ENST00000361439 OR5T2Q8NGG2 359 aa11.51□□□□□ -0.57
NSMCE1-201ENST00000361439 OR5D13Q8NGL4 314 aa11.51□□□□□ -0.57
NSMCE1-201ENST00000361439 PPP1R35Q8TAP8 253 aa11.51□□□□□ -0.57
NSMCE1-201ENST00000361439 SLC25A28Q96A46 364 aa11.51□□□□□ -0.57
NSMCE1-201ENST00000361439 GAFA1Q96PS6 74 aa11.51□□□□□ -0.57
NSMCE1-201ENST00000361439 CCL13Q99616 98 aa11.51□□□□□ -0.57
NSMCE1-201ENST00000361439 MRI1Q9BV20 369 aa11.51□□□□□ -0.57
NSMCE1-201ENST00000361439 TRAV20A0A0B4J274 112 aa11.5□□□□□ -0.57
NSMCE1-201ENST00000361439 DVL1O14640 695 aa11.5□□□□□ -0.57
NSMCE1-201ENST00000361439 SMAD7O15105 426 aaKnown RBP11.5□□□□□ -0.57
NSMCE1-201ENST00000361439 CD5LO43866 347 aa11.5□□□□□ -0.57
NSMCE1-201ENST00000361439 IL1AP01583 271 aa11.5□□□□□ -0.57
NSMCE1-201ENST00000361439 MSMBP08118 114 aa11.5□□□□□ -0.57
NSMCE1-201ENST00000361439 GABRA2P47869 451 aa11.5□□□□□ -0.57
NSMCE1-201ENST00000361439 TMBIM6P55061 237 aa11.5□□□□□ -0.57
NSMCE1-201ENST00000361439 RBM11P57052 281 aaKnown RBP11.5□□□□□ -0.57
NSMCE1-201ENST00000361439 SCAND1P57086 179 aa11.5□□□□□ -0.57
NSMCE1-201ENST00000361439 MPV17LQ2QL34 196 aa11.5□□□□□ -0.57
NSMCE1-201ENST00000361439 SLC16A12Q6ZSM3 486 aa11.5□□□□□ -0.57
NSMCE1-201ENST00000361439 CD177Q8N6Q3 437 aa11.5□□□□□ -0.57
NSMCE1-201ENST00000361439 MAPK1IP1LQ8NDC0 245 aa11.5□□□□□ -0.57
NSMCE1-201ENST00000361439 RAB2BQ8WUD1 216 aa11.5□□□□□ -0.57
NSMCE1-201ENST00000361439 FAM3DQ96BQ1 224 aa11.5□□□□□ -0.57
NSMCE1-201ENST00000361439 MSI2Q96DH6 328 aaKnown RBP11.5□□□□□ -0.57
NSMCE1-201ENST00000361439 SNX22Q96L94 193 aa11.5□□□□□ -0.57
NSMCE1-201ENST00000361439 SPACA1Q9HBV2 294 aa11.5□□□□□ -0.57
NSMCE1-201ENST00000361439 CTSZQ9UBR2 303 aa11.5□□□□□ -0.57
NSMCE1-201ENST00000361439 OR14J1Q9UGF5 321 aa11.5□□□□□ -0.57
NSMCE1-201ENST00000361439 ST3GAL6Q9Y274 331 aa11.5□□□□□ -0.57
NSMCE1-201ENST00000361439 MAB21L2Q9Y586 359 aa11.5□□□□□ -0.57
NSMCE1-201ENST00000361439 ZANQ9Y493 2812 aa11.49□□□□□ -0.57
NSMCE1-201ENST00000361439 FAM157AC9JC47 383 aa11.49□□□□□ -0.57
NSMCE1-201ENST00000361439 K7N7A8 449 aa11.49□□□□□ -0.57
NSMCE1-201ENST00000361439 ZNF737O75373 536 aa11.49□□□□□ -0.57
NSMCE1-201ENST00000361439 CRTAPO75718 401 aaPredicted RBP11.49□□□□□ -0.57
NSMCE1-201ENST00000361439 LIPFP07098 398 aa11.49□□□□□ -0.57
NSMCE1-201ENST00000361439 VSIG8P0DPA2 414 aa11.49□□□□□ -0.57
NSMCE1-201ENST00000361439 SERPINA2P20848 420 aa11.49□□□□□ -0.57
NSMCE1-201ENST00000361439 DVL1P1P54792 670 aaPredicted RBP11.49□□□□□ -0.57
NSMCE1-201ENST00000361439 QRFPP83859 136 aa11.49□□□□□ -0.57
NSMCE1-201ENST00000361439 COL10A1Q03692 680 aa11.49□□□□□ -0.57
NSMCE1-201ENST00000361439 CTF1Q16619 201 aa11.49□□□□□ -0.57
NSMCE1-201ENST00000361439 GPR107Q5VW38 600 aa11.49□□□□□ -0.57
NSMCE1-201ENST00000361439 SFXN4Q6P4A7 337 aa11.49□□□□□ -0.57
NSMCE1-201ENST00000361439 FAM216BQ8N7L0 139 aa11.49□□□□□ -0.57
NSMCE1-201ENST00000361439 OR10K1Q8NGX5 313 aa11.49□□□□□ -0.57
NSMCE1-201ENST00000361439 PTX4Q96A99 478 aa11.49□□□□□ -0.57
NSMCE1-201ENST00000361439 SLC25A10Q9UBX3 287 aaPredicted RBP11.49□□□□□ -0.57
NSMCE1-201ENST00000361439 OR5V1Q9UGF6 321 aa11.49□□□□□ -0.57
NSMCE1-201ENST00000361439 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.49□□□□□ -0.573e-6■■■■■ 28.2
NSMCE1-201ENST00000361439 F8P00451 2351 aa11.49□□□□□ -0.57
NSMCE1-201ENST00000361439 MALRD1Q5VYJ5 2156 aa11.48□□□□□ -0.57
NSMCE1-201ENST00000361439 MED13LQ71F56 2210 aa11.48□□□□□ -0.57
NSMCE1-201ENST00000361439 CSPG4Q6UVK1 2322 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms