RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 CD36P16671 472 aa8.96□□□□□ -0.98
TPM1-229ENST00000561242 BCL3P20749 454 aa8.96□□□□□ -0.98
TPM1-229ENST00000561242 GALP22466 123 aa8.96□□□□□ -0.98
TPM1-229ENST00000561242 ANOS1P23352 680 aa8.96□□□□□ -0.98
TPM1-229ENST00000561242 MPZP25189 248 aa8.96□□□□□ -0.98
TPM1-229ENST00000561242 LMO4P61968 165 aa8.96□□□□□ -0.98
TPM1-229ENST00000561242 RPS25P62851 125 aaKnown RBP8.96□□□□□ -0.98
TPM1-229ENST00000561242 RBM39Q14498 530 aaKnown RBP8.96□□□□□ -0.98
TPM1-229ENST00000561242 RAB11BQ15907 218 aa8.96□□□□□ -0.98
TPM1-229ENST00000561242 ATAD3CQ5T2N8 411 aa8.96□□□□□ -0.98
TPM1-229ENST00000561242 ATPAF1Q5TC12 328 aaPredicted RBP8.96□□□□□ -0.98
TPM1-229ENST00000561242 WDR25Q64LD2 544 aaPredicted RBP8.96□□□□□ -0.98
TPM1-229ENST00000561242 GLIPR1L1Q6UWM5 242 aa8.96□□□□□ -0.98
TPM1-229ENST00000561242 WDR86Q86TI4 376 aa8.96□□□□□ -0.98
TPM1-229ENST00000561242 CALHM1Q8IU99 346 aa8.96□□□□□ -0.98
TPM1-229ENST00000561242 KRTAP1-3Q8IUG1 177 aa8.96□□□□□ -0.98
TPM1-229ENST00000561242 C11orf53Q8IXP5 236 aa8.96□□□□□ -0.98
TPM1-229ENST00000561242 FAM185AQ8N0U4 392 aa8.96□□□□□ -0.98
TPM1-229ENST00000561242 OSR2Q8N2R0 312 aa8.96□□□□□ -0.98
TPM1-229ENST00000561242 CHST4Q8NCG5 386 aa8.96□□□□□ -0.98
TPM1-229ENST00000561242 SGCDQ92629 289 aa8.96□□□□□ -0.98
TPM1-229ENST00000561242 MUL1Q969V5 352 aa8.96□□□□□ -0.98
TPM1-229ENST00000561242 MRPS24Q96EL2 167 aaKnown RBP8.96□□□□□ -0.98
TPM1-229ENST00000561242 PGLYRP3Q96LB9 341 aa8.96□□□□□ -0.98
TPM1-229ENST00000561242 ZNF488Q96MN9 340 aa8.96□□□□□ -0.98
TPM1-229ENST00000561242 KCTD7Q96MP8 289 aa8.96□□□□□ -0.98
TPM1-229ENST00000561242 NEDD4LQ96PU5 975 aa8.96□□□□□ -0.98
TPM1-229ENST00000561242 NRIP2Q9BQI9 281 aa8.96□□□□□ -0.98
TPM1-229ENST00000561242 MRPS26Q9BYN8 205 aaKnown RBP8.96□□□□□ -0.98
TPM1-229ENST00000561242 FAM234AQ9H0X4 552 aa8.96□□□□□ -0.98
TPM1-229ENST00000561242 CNTD2Q9H8S5 307 aa8.96□□□□□ -0.98
TPM1-229ENST00000561242 DCAF16Q9NXF7 216 aa8.96□□□□□ -0.98
TPM1-229ENST00000561242 KAAG1Q9UBP8 84 aa8.96□□□□□ -0.98
TPM1-229ENST00000561242 METRNQ9UJH8 293 aa8.96□□□□□ -0.98
TPM1-229ENST00000561242 PTPN13Q12923 2485 aa8.96□□□□□ -0.98
TPM1-229ENST00000561242 CADP27708 2225 aa8.95□□□□□ -0.98
TPM1-229ENST00000561242 PPIAL4CA0A0B4J2A2 164 aa8.95□□□□□ -0.98
TPM1-229ENST00000561242 IGKV1-9A0A0C4DH69 117 aa8.95□□□□□ -0.98
TPM1-229ENST00000561242 TRDV1A0A1B0GX56 115 aa8.95□□□□□ -0.98
TPM1-229ENST00000561242 hADV38S2A0JD32 116 aa8.95□□□□□ -0.98
TPM1-229ENST00000561242 MCRIP1C9JLW8 97 aa8.95□□□□□ -0.98
TPM1-229ENST00000561242 SIGLEC5O15389 551 aa8.95□□□□□ -0.98
TPM1-229ENST00000561242 BPNT1O95861 308 aa8.95□□□□□ -0.98
TPM1-229ENST00000561242 PPIAL4GP0DN37 164 aa8.95□□□□□ -0.98
TPM1-229ENST00000561242 ARSBP15848 533 aa8.95□□□□□ -0.98
TPM1-229ENST00000561242 EGR1P18146 543 aa8.95□□□□□ -0.98
TPM1-229ENST00000561242 SRD5A1P18405 259 aa8.95□□□□□ -0.98
TPM1-229ENST00000561242 HTR2CP28335 458 aa8.95□□□□□ -0.98
TPM1-229ENST00000561242 EDDM3AQ14507 147 aa8.95□□□□□ -0.98
TPM1-229ENST00000561242 GRK1Q15835 563 aa8.95□□□□□ -0.98
TPM1-229ENST00000561242 CR1LQ2VPA4 569 aa8.95□□□□□ -0.98
TPM1-229ENST00000561242 GDPGP1Q6ZNW5 385 aa8.95□□□□□ -0.98
TPM1-229ENST00000561242 BTN2A1Q7KYR7 527 aa8.95□□□□□ -0.98
TPM1-229ENST00000561242 LINC00596Q86U02 117 aa8.95□□□□□ -0.98
TPM1-229ENST00000561242 ZNF485Q8NCK3 441 aa8.95□□□□□ -0.98
TPM1-229ENST00000561242 OR51T1Q8NGJ9 327 aa8.95□□□□□ -0.98
TPM1-229ENST00000561242 OR6M1Q8NGM8 313 aa8.95□□□□□ -0.98
TPM1-229ENST00000561242 KCNG3Q8TAE7 436 aa8.95□□□□□ -0.98
TPM1-229ENST00000561242 SNX22Q96L94 193 aa8.95□□□□□ -0.98
TPM1-229ENST00000561242 WDR13Q9H1Z4 485 aa8.95□□□□□ -0.98
TPM1-229ENST00000561242 ZNF696Q9H7X3 374 aa8.95□□□□□ -0.98
TPM1-229ENST00000561242 HMG20AQ9NP66 347 aa8.95□□□□□ -0.98
TPM1-229ENST00000561242 NDUFB11Q9NX14 153 aa8.95□□□□□ -0.98
TPM1-229ENST00000561242 SCOCQ9UIL1 159 aa8.95□□□□□ -0.98
TPM1-229ENST00000561242 ST3GAL6Q9Y274 331 aa8.95□□□□□ -0.98
TPM1-229ENST00000561242 LSM2Q9Y333 95 aaKnown RBP8.95□□□□□ -0.98
TPM1-229ENST00000561242 V9GY05 133 aa8.95□□□□□ -0.98
TPM1-229ENST00000561242 FLNBO75369 2602 aaKnown RBP8.94□□□□□ -0.98
TPM1-229ENST00000561242 TRGV10A0A0A0MS01 117 aa8.94□□□□□ -0.98
TPM1-229ENST00000561242 TRBV5-7A0A0A0MS05 114 aa8.94□□□□□ -0.98
TPM1-229ENST00000561242 TRBV23-1A0A0A0MS06 115 aa8.94□□□□□ -0.98
TPM1-229ENST00000561242 METTL21EPA6NDL7 271 aa8.94□□□□□ -0.98
TPM1-229ENST00000561242 FAM157AC9JC47 383 aa8.94□□□□□ -0.98
TPM1-229ENST00000561242 SIRPB1O00241 398 aa8.94□□□□□ -0.98
TPM1-229ENST00000561242 AIREO43918 545 aa8.94□□□□□ -0.98
TPM1-229ENST00000561242 OR7C1O76099 320 aaPredicted RBP8.94□□□□□ -0.98
TPM1-229ENST00000561242 TOX4O94842 621 aa8.94□□□□□ -0.98
TPM1-229ENST00000561242 CDRT1O95170 752 aa8.94□□□□□ -0.98
TPM1-229ENST00000561242 UCHL1P09936 223 aa8.94□□□□□ -0.98
TPM1-229ENST00000561242 CALCBP10092 127 aa8.94□□□□□ -0.98
TPM1-229ENST00000561242 RAB3BP20337 219 aa8.94□□□□□ -0.98
TPM1-229ENST00000561242 FGF12P61328 243 aa8.94□□□□□ -0.98
TPM1-229ENST00000561242 RPL31P62899 125 aaKnown RBP8.94□□□□□ -0.98
TPM1-229ENST00000561242 COL10A1Q03692 680 aa8.94□□□□□ -0.98
TPM1-229ENST00000561242 PAN3Q58A45 887 aaKnown RBP8.94□□□□□ -0.98
TPM1-229ENST00000561242 GPR157Q5UAW9 335 aa8.94□□□□□ -0.98
TPM1-229ENST00000561242 STUMQ69YW2 141 aa8.94□□□□□ -0.98
TPM1-229ENST00000561242 C22orf42Q6IC83 251 aa8.94□□□□□ -0.98
TPM1-229ENST00000561242 LYPD2Q6UXB3 125 aa8.94□□□□□ -0.98
TPM1-229ENST00000561242 UNQ9370/PRO34162Q6UXP9 181 aa8.94□□□□□ -0.98
TPM1-229ENST00000561242 GPR141Q7Z602 305 aa8.94□□□□□ -0.98
TPM1-229ENST00000561242 TPRA1Q86W33 373 aa8.94□□□□□ -0.98
TPM1-229ENST00000561242 CROCCP3Q8IVE0 287 aa8.94□□□□□ -0.98
TPM1-229ENST00000561242 BPIFB2Q8N4F0 458 aa8.94□□□□□ -0.98
TPM1-229ENST00000561242 ZNF565Q8N9K5 539 aa8.94□□□□□ -0.98
TPM1-229ENST00000561242 RPS4Y2Q8TD47 263 aa8.94□□□□□ -0.98
TPM1-229ENST00000561242 CHCHD6Q9BRQ6 235 aa8.94□□□□□ -0.98
TPM1-229ENST00000561242 MS4A7Q9GZW8 240 aaPredicted RBP8.94□□□□□ -0.98
TPM1-229ENST00000561242 GSX1Q9H4S2 264 aaPredicted RBP8.94□□□□□ -0.98
TPM1-229ENST00000561242 OCEL1Q9H607 264 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms