RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 PLEKHA1Q9HB21 404 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 WFDC1Q9HC57 220 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 MYOZ2Q9NPC6 264 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 SLC17A5Q9NRA2 495 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 SPANXA1Q9NS26 97 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 PLEKHJ1Q9NW61 149 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 GPATCH2LQ9NWQ4 482 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 SLC2A8Q9NY64 477 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 ZNF226Q9NYT6 803 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 OR5AC2Q9NZP5 309 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 COMMD9Q9P000 198 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 MRPL27Q9P0M9 148 aaKnown RBP2.14□□□□□ -2.07
SKA3-207ENST00000536239 PRO0461Q9UI25 63 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 CD207Q9UJ71 328 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 RAB22AQ9UL26 194 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 PADI3Q9ULW8 664 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 TNFSF18Q9UNG2 199 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 FOXJ3Q9UPW0 622 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 NEU3Q9UQ49 428 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 MRPS28Q9Y2Q9 187 aaKnown RBP2.14□□□□□ -2.07
SKA3-207ENST00000536239 COQ4Q9Y3A0 265 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 HDGFL3Q9Y3E1 203 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 RHBDD3Q9Y3P4 386 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 RPL36Q9Y3U8 105 aaKnown RBP2.14□□□□□ -2.07
SKA3-207ENST00000536239 PLXND1Q9Y4D7 1925 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 ANKRD12Q6UB98 2062 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 MYO18AQ92614 2054 aaKnown RBP2.14□□□□□ -2.07
SKA3-207ENST00000536239 PATJQ8NI35 1801 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 ABCA3Q99758 1704 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 CHD3Q12873 2000 aaKnown RBP2.13□□□□□ -2.07
SKA3-207ENST00000536239 ITGB4P16144 1822 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 PARP14Q460N5 1801 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 ARFGEF1Q9Y6D6 1849 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 TRAV25A0A0B4J276 109 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 TRBV7-9A0A0J9YWB2 115 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 TMEM129A0AVI4 362 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 NKX2-6A6NCS4 301 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 TMEM235A6NFC5 223 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 ANKUB1A6NFN9 424 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 TVP23AA6NH52 213 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 YDJCA8MPS7 323 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 FAM220BPB1ANY3 271 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 C17orf105B2RV13 164 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 B4DEV8 164 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 M0QZ24 198 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 M0R036 132 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 HAS3O00219 553 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 XRCC3O43542 346 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 LANCL1O43813 399 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 OR7C2O60412 319 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 B4GALT2O60909 372 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 CLDN11O75508 207 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 GJB3O75712 270 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 GRAP2O75791 330 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 NDUFB6O95139 128 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 KCNK5O95279 499 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 RAB36O95755 333 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 TSPAN13O95857 204 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 MT-ATP6P00846 226 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 TGFAP01135 160 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 IFNA5P01569 189 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 HLA-DPB1P04440 258 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 SERPIND1P05546 499 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 IGKV5-2P06315 115 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 DCNP07585 359 aaKnown RBP2.13□□□□□ -2.07
SKA3-207ENST00000536239 MMP2P08253 660 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 FCGR3AP08637 254 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 KRTAP1-4P0C5Y4 121 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 OR5G3P0C626 314 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 SLC35G6P0C7Q6 338 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 TRGC1P0CF51 173 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 FAM157CP0CG43 387 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 SMIM17P0DL12 118 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 CT45A8P0DMV1 189 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 CT45A9P0DMV2 189 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 ETFAP13804 333 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 PGAM2P15259 253 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 ATF1P18846 271 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 GSTM3P21266 225 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 MAOAP21397 527 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 DRD5P21918 477 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 MMP11P24347 488 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 CXCR1P25024 350 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 AK4P27144 223 aaPredicted RBP2.13□□□□□ -2.07
SKA3-207ENST00000536239 IMPA1P29218 277 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 S100GP29377 79 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 SSTR5P35346 364 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 FAUP35544 74 aaKnown RBP2.13□□□□□ -2.07
SKA3-207ENST00000536239 OR3A2P47893 321 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 SLC6A8P48029 635 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 RAB9AP51151 201 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 CRISP3P54108 245 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 TAS2R19P59542 299 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 C1QTNF8P60827 252 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 UBE2KP61086 200 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 ST8SIA6P61647 398 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 SNRPGP62308 76 aaKnown RBP2.13□□□□□ -2.07
SKA3-207ENST00000536239 TBPL1P62380 186 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 HERV-K104P63124 156 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 HIST1H3AP68431 136 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms