RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 H0YL77 283 aa6.43□□□□□ -1.38
HMGXB3-204ENST00000513318 CCRL2O00421 344 aa6.43□□□□□ -1.38
HMGXB3-204ENST00000513318 LMX1BO60663 402 aa6.43□□□□□ -1.38
HMGXB3-204ENST00000513318 NDUFS7O75251 213 aa6.43□□□□□ -1.38
HMGXB3-204ENST00000513318 SC5DO75845 299 aa6.43□□□□□ -1.38
HMGXB3-204ENST00000513318 PTBP3O95758 552 aaKnown RBP6.43□□□□□ -1.38
HMGXB3-204ENST00000513318 SERPINA3P01011 423 aa6.43□□□□□ -1.38
HMGXB3-204ENST00000513318 CSF3P09919 207 aa6.43□□□□□ -1.38
HMGXB3-204ENST00000513318 SMIM18P0DKX4 95 aa6.43□□□□□ -1.38
HMGXB3-204ENST00000513318 FSTP19883 344 aa6.43□□□□□ -1.38
HMGXB3-204ENST00000513318 GABRA5P31644 462 aa6.43□□□□□ -1.38
HMGXB3-204ENST00000513318 GATA4P43694 442 aa6.43□□□□□ -1.38
HMGXB3-204ENST00000513318 SOX2P48431 317 aa6.43□□□□□ -1.38
HMGXB3-204ENST00000513318 RPS11P62280 158 aaKnown RBP eCLIP6.43□□□□□ -1.38
HMGXB3-204ENST00000513318 MRPS11P82912 194 aaKnown RBP6.43□□□□□ -1.38
HMGXB3-204ENST00000513318 CNN3Q15417 329 aaKnown RBP6.43□□□□□ -1.38
HMGXB3-204ENST00000513318 TSTQ16762 297 aaKnown RBP6.43□□□□□ -1.38
HMGXB3-204ENST00000513318 KCTD8Q6ZWB6 473 aa6.43□□□□□ -1.38
HMGXB3-204ENST00000513318 UTS2BQ765I0 119 aa6.43□□□□□ -1.38
HMGXB3-204ENST00000513318 SERPINA12Q8IW75 414 aa6.43□□□□□ -1.38
HMGXB3-204ENST00000513318 PHC2Q8IXK0 858 aa6.43□□□□□ -1.38
HMGXB3-204ENST00000513318 OR13C5Q8NGS8 318 aa6.43□□□□□ -1.38
HMGXB3-204ENST00000513318 ITLN1Q8WWA0 313 aa6.43□□□□□ -1.38
HMGXB3-204ENST00000513318 HPSE2Q8WWQ2 592 aa6.43□□□□□ -1.38
HMGXB3-204ENST00000513318 MUL1Q969V5 352 aa6.43□□□□□ -1.38
HMGXB3-204ENST00000513318 TMEM106AQ96A25 262 aa6.43□□□□□ -1.38
HMGXB3-204ENST00000513318 ADAT3Q96EY9 351 aaPredicted RBP6.43□□□□□ -1.38
HMGXB3-204ENST00000513318 MEGF10Q96KG7 1140 aa6.43□□□□□ -1.38
HMGXB3-204ENST00000513318 HIST1H2AAQ96QV6 131 aa6.43□□□□□ -1.38
HMGXB3-204ENST00000513318 OR14A2Q96R54 314 aa6.43□□□□□ -1.38
HMGXB3-204ENST00000513318 RTL8AQ9BWD3 113 aa6.43□□□□□ -1.38
HMGXB3-204ENST00000513318 MRPS26Q9BYN8 205 aaKnown RBP6.43□□□□□ -1.38
HMGXB3-204ENST00000513318 CXXC4Q9H2H0 198 aa6.43□□□□□ -1.38
HMGXB3-204ENST00000513318 NDUFB11Q9NX14 153 aa6.43□□□□□ -1.38
HMGXB3-204ENST00000513318 MED13LQ71F56 2210 aa6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 A6NIN4 97 aa6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 ZNF879B4DU55 563 aa6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 SULT1B1O43704 296 aa6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 RGS9O75916 674 aaPredicted RBP6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 INMTO95050 263 aa6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 ALX3O95076 343 aa6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 IGHV4-39P01824 125 aa6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 HPXP02790 462 aa6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 OCMP0CE72 109 aaPredicted RBP6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 DAOP14920 347 aa6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 JUNBP17275 347 aaPredicted RBP6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 CRYBB2P43320 205 aa6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 RPS25P62851 125 aaKnown RBP6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 GNG3P63215 75 aa6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 ZNF154Q13106 437 aa6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 MAB21L1Q13394 359 aa6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 SSX1Q16384 188 aa6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 ZNF181Q2M3W8 571 aa6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 CEACAM21Q3KPI0 293 aa6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 CEP78Q5JTW2 689 aa6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 MOB3CQ70IA8 216 aa6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 OR5A2Q8NGI9 324 aa6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 OR5D14Q8NGL3 314 aa6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 OR13C9Q8NGT0 318 aa6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 OR5P3Q8WZ94 311 aa6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 RDH5Q92781 318 aa6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 ERGIC1Q969X5 290 aa6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 SPSB1Q96BD6 273 aa6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 FGGYQ96C11 551 aa6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 BORCS8Q96FH0 119 aa6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 RNF170Q96K19 258 aa6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 DERL3Q96Q80 235 aa6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 CITED4Q96RK1 184 aa6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 FOXC2Q99958 501 aa6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 TMED9Q9BVK6 235 aa6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 ZCCHC4Q9H5U6 513 aa6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 NEK6Q9HC98 313 aa6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 DLL4Q9NR61 685 aa6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 GPR173Q9NS66 373 aa6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 CKLFQ9UBR5 152 aa6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 SLC7A11Q9UPY5 501 aa6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 PPP1R3CQ9UQK1 317 aa6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 SF3B6Q9Y3B4 125 aaKnown RBP6.42□□□□□ -1.38
HMGXB3-204ENST00000513318 ABCA2Q9BZC7 2435 aa6.41□□□□□ -1.38
HMGXB3-204ENST00000513318 NOTCH2Q04721 2471 aa6.41□□□□□ -1.38
HMGXB3-204ENST00000513318 MALRD1Q5VYJ5 2156 aa6.41□□□□□ -1.38
HMGXB3-204ENST00000513318 TRBV5-7A0A0A0MS05 114 aa6.41□□□□□ -1.38
HMGXB3-204ENST00000513318 IGHV1-69-2A0A0G2JMI3 117 aa6.41□□□□□ -1.38
HMGXB3-204ENST00000513318 LOC100289279A0A1B0GTE1 492 aa6.41□□□□□ -1.38
HMGXB3-204ENST00000513318 LRP5LA4QPB2 252 aa6.41□□□□□ -1.38
HMGXB3-204ENST00000513318 A6NLC8 198 aa6.41□□□□□ -1.38
HMGXB3-204ENST00000513318 ZNF732B4DXR9 585 aa6.41□□□□□ -1.38
HMGXB3-204ENST00000513318 IFNL4K9M1U5 179 aa6.41□□□□□ -1.38
HMGXB3-204ENST00000513318 GABRPO00591 440 aa6.41□□□□□ -1.38
HMGXB3-204ENST00000513318 SSX4O60224 188 aa6.41□□□□□ -1.38
HMGXB3-204ENST00000513318 LY6HO94772 140 aa6.41□□□□□ -1.38
HMGXB3-204ENST00000513318 ATF1P18846 271 aa6.41□□□□□ -1.38
HMGXB3-204ENST00000513318 RAB3AP20336 220 aa6.41□□□□□ -1.38
HMGXB3-204ENST00000513318 GALP22466 123 aa6.41□□□□□ -1.38
HMGXB3-204ENST00000513318 PRKACBP22694 351 aa6.41□□□□□ -1.38
HMGXB3-204ENST00000513318 AZGP1P25311 298 aaKnown RBP6.41□□□□□ -1.38
HMGXB3-204ENST00000513318 THBS2P35442 1172 aa6.41□□□□□ -1.38
HMGXB3-204ENST00000513318 GPM6AP51674 278 aa6.41□□□□□ -1.38
HMGXB3-204ENST00000513318 FUT6P51993 359 aa6.41□□□□□ -1.38
HMGXB3-204ENST00000513318 GP2P55259 537 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms