RNA–Protein interactions for RNA: YPR124W

CTR1, Transcript of High-affinity copper transporter of the plasma membrane, yeast

Gene CTR1, Length 1,221 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTR1	YPR124W	APN2	P38207	520 aa		6.65	□□□□□ -1.34
CTR1	YPR124W	BCD1	P38772	366 aa		6.65	□□□□□ -1.34
CTR1	YPR124W	IRC13	Q08630	104 aa		6.65	□□□□□ -1.34
CTR1	YPR124W	HRP1	Q99383	534 aa	Known RBP	6.65	□□□□□ -1.34
CTR1	YPR124W	MAL31	P38156	614 aa		6.64	□□□□□ -1.35
CTR1	YPR124W	LYS9	P38999	446 aa		6.64	□□□□□ -1.35
CTR1	YPR124W	BEM4	P39011	633 aa		6.64	□□□□□ -1.35
CTR1	YPR124W	CCT3	P39077	534 aa	Known RBP	6.64	□□□□□ -1.35
CTR1	YPR124W	PYC1	P11154	1178 aa	Known RBP	6.63	□□□□□ -1.35
CTR1	YPR124W	TAF2	P23255	1407 aa		6.63	□□□□□ -1.35
CTR1	YPR124W	AKL1	P38080	1108 aa	Known RBP	6.63	□□□□□ -1.35
CTR1	YPR124W	TDA3	P38758	523 aa		6.63	□□□□□ -1.35
CTR1	YPR124W	SSN2	P38931	1420 aa		6.63	□□□□□ -1.35
CTR1	YPR124W	UBP12	P39538	1254 aa		6.63	□□□□□ -1.35
CTR1	YPR124W	FMP52	P40008	231 aa		6.63	□□□□□ -1.35
CTR1	YPR124W	DAS1	P47005	663 aa		6.63	□□□□□ -1.35
CTR1	YPR124W	UBC11	P52492	156 aa		6.63	□□□□□ -1.35
CTR1	YPR124W	MTL1	P53214	551 aa		6.63	□□□□□ -1.35
CTR1	YPR124W	CTK1	Q03957	528 aa	Known RBP	6.63	□□□□□ -1.35
CTR1	YPR124W	RNR1	P21524	888 aa	Known RBP	6.62	□□□□□ -1.35
CTR1	YPR124W	ERG6	P25087	383 aa	Known RBP	6.62	□□□□□ -1.35
CTR1	YPR124W	OAR1	P35731	278 aa		6.62	□□□□□ -1.35
CTR1	YPR124W	PPS1	P38148	807 aa		6.62	□□□□□ -1.35
CTR1	YPR124W	NUG1	P40010	520 aa	Known RBP	6.62	□□□□□ -1.35
CTR1	YPR124W	CCT5	P40413	562 aa	Known RBP	6.62	□□□□□ -1.35
CTR1	YPR124W	GZF3	P42944	551 aa	Known RBP	6.62	□□□□□ -1.35
CTR1	YPR124W	YGR237C	P50089	785 aa		6.62	□□□□□ -1.35
CTR1	YPR124W	GPD1	Q00055	391 aa	Known RBP	6.62	□□□□□ -1.35
CTR1	YPR124W	SIR3	P06701	978 aa		6.61	□□□□□ -1.35
CTR1	YPR124W	FMO1	P38866	432 aa		6.61	□□□□□ -1.35
CTR1	YPR124W	GET2	P40056	285 aa		6.61	□□□□□ -1.35
CTR1	YPR124W	YGR153W	P48238	217 aa		6.61	□□□□□ -1.35
CTR1	YPR124W	BPT1	P14772	1559 aa		6.61	□□□□□ -1.35
CTR1	YPR124W	MOH1	P38191	138 aa		6.6	□□□□□ -1.35
CTR1	YPR124W	NUP60	P39705	539 aa		6.6	□□□□□ -1.35
CTR1	YPR124W	GPP1	P41277	250 aa	Known RBP	6.6	□□□□□ -1.35
CTR1	YPR124W	NOP9	P47077	666 aa	Known RBP	6.6	□□□□□ -1.35
CTR1	YPR124W	RIA1	P53893	1110 aa		6.6	□□□□□ -1.35
CTR1	YPR124W	YTM1	Q12024	460 aa	Predicted RBP	6.6	□□□□□ -1.35
CTR1	YPR124W	ACF2	Q12168	779 aa		6.6	□□□□□ -1.35
CTR1	YPR124W	HIR1	P32479	840 aa		6.59	□□□□□ -1.35
CTR1	YPR124W	YHL017W	P38745	532 aa		6.59	□□□□□ -1.35
CTR1	YPR124W	YHR202W	P38887	602 aa		6.59	□□□□□ -1.35
CTR1	YPR124W	TEL2	P53038	688 aa		6.59	□□□□□ -1.35
CTR1	YPR124W	MUK1	Q02866	612 aa		6.59	□□□□□ -1.35
CTR1	YPR124W	HFD1	Q04458	532 aa		6.59	□□□□□ -1.35
CTR1	YPR124W	SGO1	Q08490	590 aa		6.59	□□□□□ -1.35
CTR1	YPR124W	SWI6	P09959	803 aa		6.58	□□□□□ -1.36
CTR1	YPR124W	GRX4	P32642	244 aa		6.58	□□□□□ -1.36
CTR1	YPR124W	HIS7	P33734	552 aa	Known RBP	6.58	□□□□□ -1.36
CTR1	YPR124W	YKR075C	P36155	307 aa		6.58	□□□□□ -1.36
CTR1	YPR124W	OAF1	P39720	1047 aa	Predicted RBP	6.58	□□□□□ -1.36
CTR1	YPR124W	ECM9	Q02202	377 aa		6.58	□□□□□ -1.36
CTR1	YPR124W	FAP7	Q12055	197 aa	Predicted RBP	6.58	□□□□□ -1.36
CTR1	YPR124W	PEX1	P24004	1043 aa		6.57	□□□□□ -1.36
CTR1	YPR124W	IMG2	P25642	146 aa	Predicted RBP	6.57	□□□□□ -1.36
CTR1	YPR124W	HXT6	P39003	570 aa	Known RBP	6.57	□□□□□ -1.36
CTR1	YPR124W	HXT7	P39004	570 aa		6.57	□□□□□ -1.36
CTR1	YPR124W	MNN11	P46985	422 aa	Known RBP	6.57	□□□□□ -1.36
CTR1	YPR124W	BFA1	P47113	574 aa		6.57	□□□□□ -1.36
CTR1	YPR124W	COX18	P53239	316 aa		6.57	□□□□□ -1.36
CTR1	YPR124W	APM4	Q99186	491 aa		6.57	□□□□□ -1.36
CTR1	YPR124W	ECM3	Q99252	613 aa		6.57	□□□□□ -1.36
CTR1	YPR124W	MVD1	P32377	396 aa	Known RBP	6.56	□□□□□ -1.36
CTR1	YPR124W	REV7	P38927	245 aa		6.56	□□□□□ -1.36
CTR1	YPR124W	RSC8	P43609	557 aa	Known RBP	6.56	□□□□□ -1.36
CTR1	YPR124W	STB4	P50104	949 aa		6.56	□□□□□ -1.36
CTR1	YPR124W	PAN2	P53010	1115 aa	Predicted RBP	6.56	□□□□□ -1.36
CTR1	YPR124W	YAP1802	P53309	568 aa		6.56	□□□□□ -1.36
CTR1	YPR124W	TIM44	Q01852	431 aa		6.56	□□□□□ -1.36
CTR1	YPR124W	YMR206W	Q03695	313 aa		6.56	□□□□□ -1.36
CTR1	YPR124W	YLR407W	Q06070	228 aa		6.56	□□□□□ -1.36
CTR1	YPR124W	RGC1	Q06108	1083 aa	Known RBP	6.56	□□□□□ -1.36
CTR1	YPR124W	THI22	Q06490	572 aa		6.56	□□□□□ -1.36
CTR1	YPR124W	ISA1	Q07821	250 aa	Predicted RBP	6.56	□□□□□ -1.36
CTR1	YPR124W	MCH5	Q08777	521 aa		6.56	□□□□□ -1.36
CTR1	YPR124W	RPS21B	Q3E754	87 aa	Known RBP	6.56	□□□□□ -1.36
CTR1	YPR124W	YKL033W-A	Q86ZR7	236 aa		6.56	□□□□□ -1.36
CTR1	YPR124W	PET127	P32606	800 aa		6.55	□□□□□ -1.36
CTR1	YPR124W	YKU70	P32807	602 aa		6.55	□□□□□ -1.36
CTR1	YPR124W	YPT7	P32939	208 aa		6.55	□□□□□ -1.36
CTR1	YPR124W	OAF3	P36023	863 aa		6.55	□□□□□ -1.36
CTR1	YPR124W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	6.55	□□□□□ -1.36	not detected
CTR1	YPR124W	YNL195C	P40168	261 aa		6.55	□□□□□ -1.36
CTR1	YPR124W	HFI1	Q12060	488 aa		6.55	□□□□□ -1.36
CTR1	YPR124W	SKI3	P17883	1432 aa	Known RBP	6.55	□□□□□ -1.36
CTR1	YPR124W	SIN3	P22579	1536 aa		6.55	□□□□□ -1.36
CTR1	YPR124W	ERG20	P08524	352 aa	Known RBP	6.54	□□□□□ -1.36
CTR1	YPR124W	SEC6	P32844	805 aa		6.54	□□□□□ -1.36
CTR1	YPR124W	DID4	P36108	232 aa		6.54	□□□□□ -1.36
CTR1	YPR124W	YEN1	P40028	759 aa		6.54	□□□□□ -1.36
CTR1	YPR124W	YMR210W	Q03649	449 aa		6.54	□□□□□ -1.36
CTR1	YPR124W	VPS36	Q06696	566 aa		6.54	□□□□□ -1.36
CTR1	YPR124W	HBT1	Q07653	1046 aa	Known RBP	6.54	□□□□□ -1.36
CTR1	YPR124W	CLF1	Q12309	687 aa	Predicted RBP	6.54	□□□□□ -1.36
CTR1	YPR124W	FHN1	P53279	174 aa		6.53	□□□□□ -1.36
CTR1	YPR124W	TMN2	Q04562	672 aa		6.53	□□□□□ -1.36
CTR1	YPR124W	VHS3	Q08438	674 aa		6.53	□□□□□ -1.36
CTR1	YPR124W	SSK2	P53599	1579 aa		6.52	□□□□□ -1.36
CTR1	YPR124W	FRS1	P15624	595 aa	Known RBP	6.52	□□□□□ -1.37

Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms