RNA–Protein interactions for RNA: YPL178W

CBC2, Transcript of Small subunit of the heterodimeric cap binding complex with Sto1p, yeast

Gene CBC2, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CBC2	YPL178W	CTF3	Q12748	733 aa		5.76	□□□□□ -1.49
CBC2	YPL178W	ATP1	P07251	545 aa	Known RBP	5.75	□□□□□ -1.49
CBC2	YPL178W	CIT2	P08679	460 aa		5.75	□□□□□ -1.49
CBC2	YPL178W	URK1	P27515	501 aa		5.75	□□□□□ -1.49
CBC2	YPL178W	VPH1	P32563	840 aa	Known RBP	5.75	□□□□□ -1.49
CBC2	YPL178W	RPC25	P35718	212 aa		5.75	□□□□□ -1.49
CBC2	YPL178W	KDX1	P36005	433 aa		5.75	□□□□□ -1.49
CBC2	YPL178W	RKM3	P38222	552 aa		5.75	□□□□□ -1.49
CBC2	YPL178W	SHE3	P38272	425 aa	Known RBP	5.75	□□□□□ -1.49
CBC2	YPL178W	MIP6	P38760	659 aa	Known RBP	5.75	□□□□□ -1.49
CBC2	YPL178W	SIP5	P40210	489 aa	Known RBP	5.75	□□□□□ -1.49
CBC2	YPL178W	FAF1	P40546	346 aa	Predicted RBP	5.75	□□□□□ -1.49
CBC2	YPL178W	YFL052W	P43551	465 aa		5.75	□□□□□ -1.49
CBC2	YPL178W	STB4	P50104	949 aa		5.75	□□□□□ -1.49
CBC2	YPL178W	ALT1	P52893	592 aa		5.75	□□□□□ -1.49
CBC2	YPL178W	STP1	Q00947	519 aa		5.75	□□□□□ -1.49
CBC2	YPL178W	PNG1	Q02890	363 aa		5.75	□□□□□ -1.49
CBC2	YPL178W	EEB1	Q02891	456 aa		5.75	□□□□□ -1.49
CBC2	YPL178W	AGE1	Q04412	482 aa		5.75	□□□□□ -1.49
CBC2	YPL178W	TMA16	Q08687	178 aa		5.75	□□□□□ -1.49
CBC2	YPL178W	TAF10	Q12030	206 aa		5.75	□□□□□ -1.49
CBC2	YPL178W	GAL80	P04387	435 aa		5.74	□□□□□ -1.49
CBC2	YPL178W	GAL10	P04397	699 aa		5.74	□□□□□ -1.49
CBC2	YPL178W	RGR1	P19263	1082 aa		5.74	□□□□□ -1.49
CBC2	YPL178W	COX11	P19516	300 aa	Known RBP	5.74	□□□□□ -1.49
CBC2	YPL178W	EFB1	P32471	206 aa	Known RBP	5.74	□□□□□ -1.49
CBC2	YPL178W	NIP100	P33420	868 aa		5.74	□□□□□ -1.49
CBC2	YPL178W	MIC60	P36112	540 aa		5.74	□□□□□ -1.49
CBC2	YPL178W	PSY4	P38193	441 aa		5.74	□□□□□ -1.49
CBC2	YPL178W	RFS1	P38234	210 aa	Known RBP	5.74	□□□□□ -1.49
CBC2	YPL178W	SBE2	P42223	864 aa	Known RBP	5.74	□□□□□ -1.49
CBC2	YPL178W	NUT1	P53114	1132 aa		5.74	□□□□□ -1.49
CBC2	YPL178W	SCW11	P53189	542 aa		5.74	□□□□□ -1.49
CBC2	YPL178W	CWC22	P53333	577 aa	Known RBP	5.74	□□□□□ -1.49
CBC2	YPL178W	TUB4	P53378	473 aa		5.74	□□□□□ -1.49
CBC2	YPL178W	SPC98	P53540	846 aa		5.74	□□□□□ -1.49
CBC2	YPL178W	CSR1	Q06705	408 aa	Known RBP	5.74	□□□□□ -1.49
CBC2	YPL178W	YPR078C	Q06813	372 aa		5.74	□□□□□ -1.49
CBC2	YPL178W	ABP140	Q08641	628 aa	Known RBP	5.74	□□□□□ -1.49
CBC2	YPL178W	YDL206W	Q12424	762 aa		5.74	□□□□□ -1.49
CBC2	YPL178W	IME1	P21190	360 aa		5.73	□□□□□ -1.49
CBC2	YPL178W	SPO11	P23179	398 aa		5.73	□□□□□ -1.49
CBC2	YPL178W	RRT12	P25381	491 aa		5.73	□□□□□ -1.49
CBC2	YPL178W	KIP1	P28742	1111 aa		5.73	□□□□□ -1.49
CBC2	YPL178W	SMC1	P32908	1225 aa		5.73	□□□□□ -1.49
CBC2	YPL178W	XRS2	P33301	854 aa		5.73	□□□□□ -1.49
CBC2	YPL178W	HMT1	P38074	348 aa		5.73	□□□□□ -1.49
CBC2	YPL178W	APM2	P38700	605 aa		5.73	□□□□□ -1.49
CBC2	YPL178W	GEM1	P39722	662 aa		5.73	□□□□□ -1.49
CBC2	YPL178W	OYE3	P41816	400 aa	Predicted RBP	5.73	□□□□□ -1.49
CBC2	YPL178W	CPR7	P47103	393 aa		5.73	□□□□□ -1.49
CBC2	YPL178W	BFA1	P47113	574 aa		5.73	□□□□□ -1.49
CBC2	YPL178W	YJR054W	P47114	497 aa		5.73	□□□□□ -1.49
CBC2	YPL178W	INP52	P50942	1183 aa		5.73	□□□□□ -1.49
CBC2	YPL178W	DRN1	P53255	507 aa	Known RBP	5.73	□□□□□ -1.49
CBC2	YPL178W	SSL2	Q00578	843 aa		5.73	□□□□□ -1.49
CBC2	YPL178W	SNU56	Q03782	492 aa	Known RBP	5.73	□□□□□ -1.49
CBC2	YPL178W	YLR287C	Q05881	355 aa		5.73	□□□□□ -1.49
CBC2	YPL178W	YLR257W	Q06146	321 aa	Known RBP	5.73	□□□□□ -1.49
CBC2	YPL178W	CDD1	Q06549	142 aa		5.73	□□□□□ -1.49
CBC2	YPL178W	TY1A-BL	Q12266	440 aa		5.73	□□□□□ -1.49
CBC2	YPL178W	RPS6A	P0CX37	236 aa	Known RBP	5.72	□□□□□ -1.49
CBC2	YPL178W	RPS6B	P0CX38	236 aa	Predicted RBP	5.72	□□□□□ -1.49
CBC2	YPL178W	MAS1	P10507	462 aa		5.72	□□□□□ -1.49
CBC2	YPL178W	RAD27	P26793	382 aa		5.72	□□□□□ -1.49
CBC2	YPL178W	SEC65	P29478	273 aa		5.72	□□□□□ -1.49
CBC2	YPL178W	SMC2	P38989	1170 aa	Known RBP	5.72	□□□□□ -1.49
CBC2	YPL178W	SAH1	P39954	449 aa	Known RBP	5.72	□□□□□ -1.49
CBC2	YPL178W	SDS3	P40505	327 aa		5.72	□□□□□ -1.49
CBC2	YPL178W	TAF1	P46677	1066 aa		5.72	□□□□□ -1.49
CBC2	YPL178W	POL31	P46957	487 aa		5.72	□□□□□ -1.49
CBC2	YPL178W	VPS75	P53853	264 aa		5.72	□□□□□ -1.49
CBC2	YPL178W	ESBP6	P53918	673 aa		5.72	□□□□□ -1.49
CBC2	YPL178W	YNL034W	P53963	612 aa		5.72	□□□□□ -1.49
CBC2	YPL178W	YNL018C	P53976	612 aa		5.72	□□□□□ -1.49
CBC2	YPL178W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	5.72	□□□□□ -1.49	not detected
CBC2	YPL178W	PIG1	Q06216	648 aa		5.72	□□□□□ -1.49
CBC2	YPL178W	TSR1	Q07381	788 aa	Known RBP	5.72	□□□□□ -1.49
CBC2	YPL178W	CWC2	Q12046	339 aa	Predicted RBP	5.72	□□□□□ -1.49
CBC2	YPL178W	YPR027C	Q12079	277 aa		5.72	□□□□□ -1.49
CBC2	YPL178W	CDC33	P07260	213 aa	Known RBP	5.71	□□□□□ -1.5
CBC2	YPL178W	CDC42	P19073	191 aa		5.71	□□□□□ -1.5
CBC2	YPL178W	RNR1	P21524	888 aa	Known RBP	5.71	□□□□□ -1.5
CBC2	YPL178W	GAC1	P28006	793 aa		5.71	□□□□□ -1.5
CBC2	YPL178W	KNS1	P32350	737 aa	Predicted RBP	5.71	□□□□□ -1.5
CBC2	YPL178W	GCS1	P35197	352 aa		5.71	□□□□□ -1.5
CBC2	YPL178W	CSG2	P35206	410 aa		5.71	□□□□□ -1.5
CBC2	YPL178W	DEF1	P35732	738 aa	Known RBP	5.71	□□□□□ -1.5
CBC2	YPL178W	NOP4	P37838	685 aa	Known RBP	5.71	□□□□□ -1.5
CBC2	YPL178W	PCM1	P38628	557 aa	Known RBP	5.71	□□□□□ -1.5
CBC2	YPL178W	CCC2	P38995	1004 aa		5.71	□□□□□ -1.5
CBC2	YPL178W	SHQ1	P40486	507 aa	Predicted RBP	5.71	□□□□□ -1.5
CBC2	YPL178W	ADA2	Q02336	434 aa		5.71	□□□□□ -1.5
CBC2	YPL178W	MZM1	Q03429	123 aa	Predicted RBP	5.71	□□□□□ -1.5
CBC2	YPL178W	OPY2	Q06810	360 aa		5.71	□□□□□ -1.5
CBC2	YPL178W	RRP6	Q12149	733 aa	Known RBP	5.71	□□□□□ -1.5
CBC2	YPL178W	ECM3	Q99252	613 aa		5.71	□□□□□ -1.5
CBC2	YPL178W	AI5_BETA	Q9ZZX0	354 aa		5.71	□□□□□ -1.5
CBC2	YPL178W	SNF1	P06782	633 aa	Known RBP	5.7	□□□□□ -1.5
CBC2	YPL178W	CHS1	P08004	1131 aa		5.7	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 66.3 ms