RNA–Protein interactions for RNA: YPL030W

TRM44, Transcript of tRNA(Ser) Um(44) 2'-O-methyltransferase, yeast

Gene TRM44, Length 1,704 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM44	YPL030W	PRP19	P32523	503 aa	Known RBP	4.63	□□□□□ -1.67
TRM44	YPL030W	RPT1	P33299	467 aa	Known RBP	4.63	□□□□□ -1.67
TRM44	YPL030W	BCK2	P33306	851 aa		4.63	□□□□□ -1.67
TRM44	YPL030W	BUD2	P33314	1104 aa		4.63	□□□□□ -1.67
TRM44	YPL030W	TEF4	P36008	412 aa	Known RBP	4.63	□□□□□ -1.67
TRM44	YPL030W	CAF4	P36130	643 aa		4.63	□□□□□ -1.67
TRM44	YPL030W	PGM2	P37012	569 aa	Known RBP	4.63	□□□□□ -1.67
TRM44	YPL030W	YBR225W	P38321	900 aa		4.63	□□□□□ -1.67
TRM44	YPL030W	DYS1	P38791	387 aa		4.63	□□□□□ -1.67
TRM44	YPL030W	SSO2	P39926	295 aa		4.63	□□□□□ -1.67
TRM44	YPL030W	UTP25	P40498	721 aa	Known RBP	4.63	□□□□□ -1.67
TRM44	YPL030W	COX16	P47081	118 aa		4.63	□□□□□ -1.67
TRM44	YPL030W	ABM1	P47146	123 aa		4.63	□□□□□ -1.67
TRM44	YPL030W	MNP1	P53163	194 aa	Predicted RBP	4.63	□□□□□ -1.67
TRM44	YPL030W	YGR111W	P53265	400 aa		4.63	□□□□□ -1.67
TRM44	YPL030W	BSC5	P53755	489 aa		4.63	□□□□□ -1.67
TRM44	YPL030W	RMI1	Q02685	241 aa		4.63	□□□□□ -1.67
TRM44	YPL030W	RPM2	Q02773	1202 aa		4.63	□□□□□ -1.67
TRM44	YPL030W	SPC24	Q04477	213 aa		4.63	□□□□□ -1.67
TRM44	YPL030W	YPR109W	Q06104	294 aa		4.63	□□□□□ -1.67
TRM44	YPL030W	DXO1	Q06349	442 aa		4.63	□□□□□ -1.67
TRM44	YPL030W	REC8	Q12188	680 aa		4.63	□□□□□ -1.67
TRM44	YPL030W	RRI2	Q12348	645 aa		4.63	□□□□□ -1.67
TRM44	YPL030W	VPS15	P22219	1454 aa		4.63	□□□□□ -1.67
TRM44	YPL030W	SNF1	P06782	633 aa	Known RBP	4.62	□□□□□ -1.67
TRM44	YPL030W	RPO26	P20435	155 aa		4.62	□□□□□ -1.67
TRM44	YPL030W	IME1	P21190	360 aa		4.62	□□□□□ -1.67
TRM44	YPL030W	URA1	P28272	314 aa	Predicted RBP	4.62	□□□□□ -1.67
TRM44	YPL030W	SRB4	P32569	687 aa		4.62	□□□□□ -1.67
TRM44	YPL030W	GRX4	P32642	244 aa		4.62	□□□□□ -1.67
TRM44	YPL030W	MRP4	P32902	394 aa		4.62	□□□□□ -1.67
TRM44	YPL030W	CUE2	P36075	443 aa	Known RBP	4.62	□□□□□ -1.67
TRM44	YPL030W	ALG3	P38179	458 aa		4.62	□□□□□ -1.67
TRM44	YPL030W	DED81	P38707	554 aa	Known RBP	4.62	□□□□□ -1.67
TRM44	YPL030W	YHI9	P38765	294 aa		4.62	□□□□□ -1.67
TRM44	YPL030W	SCS2	P40075	244 aa	Known RBP	4.62	□□□□□ -1.67
TRM44	YPL030W	ATG32	P40458	529 aa		4.62	□□□□□ -1.67
TRM44	YPL030W	BUD6	P41697	788 aa		4.62	□□□□□ -1.67
TRM44	YPL030W	MMM1	P41800	426 aa		4.62	□□□□□ -1.67
TRM44	YPL030W	GNP1	P48813	663 aa		4.62	□□□□□ -1.67
TRM44	YPL030W	TFB2	Q02939	513 aa		4.62	□□□□□ -1.67
TRM44	YPL030W	VPS64	Q03944	604 aa		4.62	□□□□□ -1.67
TRM44	YPL030W	COX20	Q04935	205 aa		4.62	□□□□□ -1.67
TRM44	YPL030W	RGC1	Q06108	1083 aa	Known RBP	4.62	□□□□□ -1.67
TRM44	YPL030W	DIS3	Q08162	1001 aa	Known RBP	4.62	□□□□□ -1.67
TRM44	YPL030W	TIP41	Q12199	356 aa		4.62	□□□□□ -1.67
TRM44	YPL030W	SNU23	Q12368	194 aa	Predicted RBP	4.62	□□□□□ -1.67
TRM44	YPL030W	MMP1	Q12372	583 aa		4.62	□□□□□ -1.67
TRM44	YPL030W	RTR2	Q12378	196 aa		4.62	□□□□□ -1.67
TRM44	YPL030W	OCA6	Q12454	224 aa		4.62	□□□□□ -1.67
TRM44	YPL030W	RAD1	P06777	1100 aa		4.61	□□□□□ -1.67
TRM44	YPL030W	RAD4	P14736	754 aa		4.61	□□□□□ -1.67
TRM44	YPL030W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
TRM44	YPL030W	DBP3	P20447	523 aa	Known RBP	4.61	□□□□□ -1.67
TRM44	YPL030W	DOM34	P33309	386 aa		4.61	□□□□□ -1.67
TRM44	YPL030W	CNS1	P33313	385 aa		4.61	□□□□□ -1.67
TRM44	YPL030W	MTC2	P34246	357 aa		4.61	□□□□□ -1.67
TRM44	YPL030W	YKT6	P36015	200 aa	Known RBP	4.61	□□□□□ -1.67
TRM44	YPL030W	SDS22	P36047	338 aa		4.61	□□□□□ -1.67
TRM44	YPL030W	SEA4	P38164	1038 aa		4.61	□□□□□ -1.67
TRM44	YPL030W	CCT6	P39079	546 aa		4.61	□□□□□ -1.67
TRM44	YPL030W	ZIM17	P42844	174 aa		4.61	□□□□□ -1.67
TRM44	YPL030W	BNA6	P43619	295 aa		4.61	□□□□□ -1.67
TRM44	YPL030W	YJL055W	P47044	245 aa		4.61	□□□□□ -1.67
TRM44	YPL030W	IMD3	P50095	523 aa	Known RBP	4.61	□□□□□ -1.67
TRM44	YPL030W	TEL2	P53038	688 aa		4.61	□□□□□ -1.67
TRM44	YPL030W	YGR021W	P53212	290 aa		4.61	□□□□□ -1.67
TRM44	YPL030W	FPK1	P53739	893 aa		4.61	□□□□□ -1.67
TRM44	YPL030W	NIS1	P53939	407 aa		4.61	□□□□□ -1.67
TRM44	YPL030W	RCM1	P53972	490 aa		4.61	□□□□□ -1.67
TRM44	YPL030W	RSC4	Q02206	625 aa		4.61	□□□□□ -1.67
TRM44	YPL030W	TAF12	Q03761	539 aa		4.61	□□□□□ -1.67
TRM44	YPL030W	PPM1	Q04081	328 aa		4.61	□□□□□ -1.67
TRM44	YPL030W	TYW1	Q08960	810 aa	Known RBP	4.61	□□□□□ -1.67
TRM44	YPL030W	LAP2	Q10740	671 aa		4.61	□□□□□ -1.67
TRM44	YPL030W	PHM7	Q12252	991 aa		4.61	□□□□□ -1.67
TRM44	YPL030W	YBL113C	Q7M4S9	792 aa		4.61	□□□□□ -1.67
TRM44	YPL030W	HIR3	P47171	1648 aa		4.61	□□□□□ -1.67
TRM44	YPL030W	PSK1	P31374	1356 aa		4.61	□□□□□ -1.67
TRM44	YPL030W	SES1	P07284	462 aa	Known RBP	4.6	□□□□□ -1.67
TRM44	YPL030W	DSF1	P0CX08	502 aa		4.6	□□□□□ -1.67
TRM44	YPL030W	YNR073C	P0CX09	502 aa		4.6	□□□□□ -1.67
TRM44	YPL030W	TIF1	P10081	395 aa	Known RBP	4.6	□□□□□ -1.67
TRM44	YPL030W	BIK1	P11709	440 aa		4.6	□□□□□ -1.67
TRM44	YPL030W	MSD1	P15179	658 aa	Known RBP	4.6	□□□□□ -1.67
TRM44	YPL030W	NCP1	P16603	691 aa	Known RBP	4.6	□□□□□ -1.67
TRM44	YPL030W	RDS2	P19541	446 aa	Known RBP	4.6	□□□□□ -1.67
TRM44	YPL030W	PRP6	P19735	899 aa	Predicted RBP	4.6	□□□□□ -1.67
TRM44	YPL030W	RAM1	P22007	431 aa		4.6	□□□□□ -1.67
TRM44	YPL030W	CLB2	P24869	491 aa		4.6	□□□□□ -1.67
TRM44	YPL030W	CLB3	P24870	427 aa		4.6	□□□□□ -1.67
TRM44	YPL030W	RVS161	P25343	265 aa	Known RBP	4.6	□□□□□ -1.67
TRM44	YPL030W	KIP1	P28742	1111 aa		4.6	□□□□□ -1.67
TRM44	YPL030W	RCN1	P36054	211 aa		4.6	□□□□□ -1.67
TRM44	YPL030W	VRP1	P37370	817 aa		4.6	□□□□□ -1.67
TRM44	YPL030W	KAP104	P38217	918 aa	Known RBP	4.6	□□□□□ -1.67
TRM44	YPL030W	ALG14	P38242	237 aa		4.6	□□□□□ -1.67
TRM44	YPL030W	SPP381	P38282	291 aa	Predicted RBP	4.6	□□□□□ -1.67
TRM44	YPL030W	GLO3	P38682	493 aa	Known RBP	4.6	□□□□□ -1.67
TRM44	YPL030W	PCF11	P39081	626 aa	Predicted RBP	4.6	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms