RNA–Protein interactions for RNA: YOR259C

RPT4, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeast

Gene RPT4, Length 1,314 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPT4	YOR259C	SGM1	P47166	707 aa		5.75	□□□□□ -1.49
RPT4	YOR259C	YGR153W	P48238	217 aa		5.75	□□□□□ -1.49
RPT4	YOR259C	TOF1	P53840	1238 aa		5.75	□□□□□ -1.49
RPT4	YOR259C	SEC5	P89102	971 aa		5.75	□□□□□ -1.49
RPT4	YOR259C	MDM1	Q01846	1127 aa		5.75	□□□□□ -1.49
RPT4	YOR259C	YPL109C	Q02981	657 aa		5.75	□□□□□ -1.49
RPT4	YOR259C	ECI1	Q05871	280 aa		5.75	□□□□□ -1.49
RPT4	YOR259C	PIG1	Q06216	648 aa		5.75	□□□□□ -1.49
RPT4	YOR259C	CMS1	Q07897	291 aa	Known RBP	5.75	□□□□□ -1.49
RPT4	YOR259C	SIL1	Q08199	421 aa		5.75	□□□□□ -1.49
RPT4	YOR259C	YBL113C	Q7M4S9	792 aa		5.75	□□□□□ -1.49
RPT4	YOR259C	FKS1	P38631	1876 aa	Known RBP	5.75	□□□□□ -1.49
RPT4	YOR259C	RPB2	P08518	1224 aa	Known RBP	5.74	□□□□□ -1.49
RPT4	YOR259C	PYC1	P11154	1178 aa	Known RBP	5.74	□□□□□ -1.49
RPT4	YOR259C	PRP4	P20053	465 aa	Known RBP	5.74	□□□□□ -1.49
RPT4	YOR259C	IRS4	P36115	615 aa	Known RBP	5.74	□□□□□ -1.49
RPT4	YOR259C	ERP5	P38819	212 aa		5.74	□□□□□ -1.49
RPT4	YOR259C	VPS45	P38932	577 aa		5.74	□□□□□ -1.49
RPT4	YOR259C	PEA2	P40091	420 aa		5.74	□□□□□ -1.49
RPT4	YOR259C	MMM1	P41800	426 aa		5.74	□□□□□ -1.49
RPT4	YOR259C	TOS3	P43637	560 aa		5.74	□□□□□ -1.49
RPT4	YOR259C	RPC17	P47076	161 aa		5.74	□□□□□ -1.49
RPT4	YOR259C	BTN2	P53286	410 aa		5.74	□□□□□ -1.49
RPT4	YOR259C	GTR1	Q00582	310 aa		5.74	□□□□□ -1.49
RPT4	YOR259C	TFB2	Q02939	513 aa		5.74	□□□□□ -1.49
RPT4	YOR259C	DIG1	Q03063	452 aa	Known RBP	5.74	□□□□□ -1.49
RPT4	YOR259C	YMR187C	Q03236	431 aa		5.74	□□□□□ -1.49
RPT4	YOR259C	USA1	Q03714	838 aa		5.74	□□□□□ -1.49
RPT4	YOR259C	YLR177W	Q06251	628 aa		5.74	□□□□□ -1.49
RPT4	YOR259C	RIO1	Q12196	484 aa	Known RBP	5.74	□□□□□ -1.49
RPT4	YOR259C	TOM1	Q03280	3268 aa		5.74	□□□□□ -1.49
RPT4	YOR259C	SSB1	P11484	613 aa	Known RBP	5.74	□□□□□ -1.49
RPT4	YOR259C	MRPS28	P21771	286 aa		5.74	□□□□□ -1.49
RPT4	YOR259C	APL1	P27351	700 aa		5.74	□□□□□ -1.49
RPT4	YOR259C	GRS1	P38088	690 aa	Known RBP	5.74	□□□□□ -1.49
RPT4	YOR259C	YBR062C	P38239	180 aa		5.74	□□□□□ -1.49
RPT4	YOR259C	SKN7	P38889	622 aa		5.74	□□□□□ -1.49
RPT4	YOR259C	ACA1	P39970	489 aa		5.74	□□□□□ -1.49
RPT4	YOR259C	SSB2	P40150	613 aa	Known RBP	5.74	□□□□□ -1.49
RPT4	YOR259C	TMA22	P47089	198 aa	Predicted RBP	5.74	□□□□□ -1.49
RPT4	YOR259C	YJR039W	P47107	1121 aa		5.74	□□□□□ -1.49
RPT4	YOR259C	URB2	P47108	1174 aa		5.74	□□□□□ -1.49
RPT4	YOR259C	TAD1	P53065	400 aa		5.74	□□□□□ -1.49
RPT4	YOR259C	KAP114	P53067	1004 aa		5.74	□□□□□ -1.49
RPT4	YOR259C	ADY4	Q05955	493 aa		5.74	□□□□□ -1.49
RPT4	YOR259C	SUE1	Q06524	206 aa		5.74	□□□□□ -1.49
RPT4	YOR259C	YPR078C	Q06813	372 aa		5.74	□□□□□ -1.49
RPT4	YOR259C	SLK19	Q08581	821 aa	Known RBP	5.74	□□□□□ -1.49
RPT4	YOR259C	YDR215C	Q12240	137 aa		5.74	□□□□□ -1.49
RPT4	YOR259C	ERG11	P10614	530 aa		5.73	□□□□□ -1.49
RPT4	YOR259C	FUS1	P11710	512 aa		5.73	□□□□□ -1.49
RPT4	YOR259C	PRP9	P19736	530 aa	Known RBP	5.73	□□□□□ -1.49
RPT4	YOR259C	YCK2	P23292	546 aa	Known RBP	5.73	□□□□□ -1.49
RPT4	YOR259C	CLB4	P24871	460 aa		5.73	□□□□□ -1.49
RPT4	YOR259C	BUD14	P27637	709 aa		5.73	□□□□□ -1.49
RPT4	YOR259C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	5.73	□□□□□ -1.49	not detected
RPT4	YOR259C	CCT3	P39077	534 aa	Known RBP	5.73	□□□□□ -1.49
RPT4	YOR259C	INP51	P40559	946 aa	Known RBP	5.73	□□□□□ -1.49
RPT4	YOR259C	THI6	P41835	540 aa		5.73	□□□□□ -1.49
RPT4	YOR259C	ASE1	P50275	885 aa		5.73	□□□□□ -1.49
RPT4	YOR259C	CPR6	P53691	371 aa	Known RBP	5.73	□□□□□ -1.49
RPT4	YOR259C	DSE4	P53753	1117 aa		5.73	□□□□□ -1.49
RPT4	YOR259C	GIR2	Q03768	265 aa	Predicted RBP	5.73	□□□□□ -1.49
RPT4	YOR259C	SPC24	Q04477	213 aa		5.73	□□□□□ -1.49
RPT4	YOR259C	TAF9	Q05027	157 aa		5.73	□□□□□ -1.49
RPT4	YOR259C	VIP1	Q06685	1146 aa	Known RBP	5.73	□□□□□ -1.49
RPT4	YOR259C	MLH2	Q07980	695 aa		5.73	□□□□□ -1.49
RPT4	YOR259C	TAF10	Q12030	206 aa		5.73	□□□□□ -1.49
RPT4	YOR259C	SLP1	Q12232	587 aa		5.73	□□□□□ -1.49
RPT4	YOR259C	SEY1	Q99287	776 aa		5.73	□□□□□ -1.49
RPT4	YOR259C	FOB1	O13329	566 aa		5.72	□□□□□ -1.49
RPT4	YOR259C	GCD2	P12754	651 aa	Predicted RBP	5.72	□□□□□ -1.49
RPT4	YOR259C	POL3	P15436	1097 aa		5.72	□□□□□ -1.49
RPT4	YOR259C	RPL8A	P17076	256 aa	Known RBP	5.72	□□□□□ -1.49
RPT4	YOR259C	ILV6	P25605	309 aa	Known RBP	5.72	□□□□□ -1.49
RPT4	YOR259C	YCR051W	P25631	222 aa		5.72	□□□□□ -1.49
RPT4	YOR259C	SEC20	P28791	383 aa		5.72	□□□□□ -1.49
RPT4	YOR259C	DPH5	P32469	300 aa	Predicted RBP	5.72	□□□□□ -1.49
RPT4	YOR259C	SAS3	P34218	831 aa		5.72	□□□□□ -1.49
RPT4	YOR259C	PPS1	P38148	807 aa		5.72	□□□□□ -1.49
RPT4	YOR259C	SAP185	P40856	1058 aa		5.72	□□□□□ -1.49
RPT4	YOR259C	MDJ2	P42834	146 aa		5.72	□□□□□ -1.49
RPT4	YOR259C	TAN1	P53072	289 aa	Predicted RBP	5.72	□□□□□ -1.49
RPT4	YOR259C	LSB1	P53281	241 aa		5.72	□□□□□ -1.49
RPT4	YOR259C	RET3	P53600	189 aa		5.72	□□□□□ -1.49
RPT4	YOR259C	BNI5	P53890	448 aa	Known RBP	5.72	□□□□□ -1.49
RPT4	YOR259C	YNL011C	P53980	444 aa		5.72	□□□□□ -1.49
RPT4	YOR259C	BET4	Q00618	327 aa		5.72	□□□□□ -1.49
RPT4	YOR259C	UTP14	Q04500	899 aa	Known RBP	5.72	□□□□□ -1.49
RPT4	YOR259C	AIM41	Q12032	185 aa		5.72	□□□□□ -1.49
RPT4	YOR259C	NCA2	Q12374	616 aa		5.72	□□□□□ -1.49
RPT4	YOR259C	KAR3	P17119	729 aa		5.71	□□□□□ -1.5
RPT4	YOR259C	RAD51	P25454	400 aa		5.71	□□□□□ -1.5
RPT4	YOR259C	NAM7	P30771	971 aa	Known RBP	5.71	□□□□□ -1.5
RPT4	YOR259C	CDC11	P32458	415 aa		5.71	□□□□□ -1.5
RPT4	YOR259C	NDT80	P38830	627 aa		5.71	□□□□□ -1.5
RPT4	YOR259C	PNT1	P38969	423 aa		5.71	□□□□□ -1.5
RPT4	YOR259C	SMX2	P40204	77 aa	Known RBP	5.71	□□□□□ -1.5
RPT4	YOR259C	HOS4	P40480	1083 aa		5.71	□□□□□ -1.5
RPT4	YOR259C	YIL001W	P40560	513 aa		5.71	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 46.4 ms