RNA–Protein interactions for RNA: YOR157C

PUP1, Transcript of Beta 2 subunit of the 20S proteasome, yeastyeast

Gene PUP1, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP1YOR157C VMA1P17255 1071 aaKnown RBP9.31□□□□□ -0.92
PUP1YOR157C MUD1P32605 298 aaKnown RBP9.31□□□□□ -0.92
PUP1YOR157C FRE1P32791 686 aa9.31□□□□□ -0.92
PUP1YOR157C WSC4P38739 605 aa9.31□□□□□ -0.92
PUP1YOR157C NPP2P39997 493 aa9.31□□□□□ -0.92
PUP1YOR157C YPS6P40583 537 aa9.31□□□□□ -0.92
PUP1YOR157C TOF2Q02208 771 aa9.31□□□□□ -0.92
PUP1YOR157C ECM22Q05958 814 aaPredicted RBP9.31□□□□□ -0.92
PUP1YOR157C YOR387CQ08910 206 aa9.31□□□□□ -0.92
PUP1YOR157C PHO8P11491 566 aa9.3□□□□□ -0.92
PUP1YOR157C YHL017WP38745 532 aa9.3□□□□□ -0.92
PUP1YOR157C BAT1P38891 393 aaKnown RBP9.3□□□□□ -0.92
PUP1YOR157C THI6P41835 540 aa9.3□□□□□ -0.92
PUP1YOR157C CTF18P49956 741 aa9.3□□□□□ -0.92
PUP1YOR157C RTK1Q12100 620 aaPredicted RBP9.3□□□□□ -0.92
PUP1YOR157C PUF4P25339 888 aaKnown RBP RIP-Chip data9.29□□□□□ -0.92 RIP-Chip
PUP1YOR157C RML2P32611 393 aa9.29□□□□□ -0.92
PUP1YOR157C ATG12P38316 186 aa9.29□□□□□ -0.92
PUP1YOR157C SHQ1P40486 507 aaPredicted RBP9.29□□□□□ -0.92
PUP1YOR157C DAS1P47005 663 aa9.29□□□□□ -0.92
PUP1YOR157C NPA3P47122 385 aa9.29□□□□□ -0.92
PUP1YOR157C NPY1P53164 384 aa9.29□□□□□ -0.92
PUP1YOR157C TDA7P53882 636 aaPredicted RBP9.29□□□□□ -0.92
PUP1YOR157C MTD1Q02046 320 aaKnown RBP9.29□□□□□ -0.92
PUP1YOR157C LPX1Q12405 387 aaKnown RBP9.29□□□□□ -0.92
PUP1YOR157C RGR1P19263 1082 aa9.28□□□□□ -0.92
PUP1YOR157C SFP1P32432 683 aa9.28□□□□□ -0.92
PUP1YOR157C PIN4P34217 668 aaKnown RBP RIP-Chip data9.28□□□□□ -0.92not detected
PUP1YOR157C HEM14P40012 539 aa9.28□□□□□ -0.92
PUP1YOR157C VEL1P53058 206 aa9.28□□□□□ -0.92
PUP1YOR157C POL2P21951 2222 aaKnown RBP9.27□□□□□ -0.93
PUP1YOR157C RAD3P06839 778 aa9.27□□□□□ -0.93
PUP1YOR157C SNF5P18480 905 aa9.27□□□□□ -0.93
PUP1YOR157C IME1P21190 360 aa9.27□□□□□ -0.93
PUP1YOR157C CCR4P31384 837 aaKnown RBP9.27□□□□□ -0.93
PUP1YOR157C FHL1P39521 936 aa9.27□□□□□ -0.93
PUP1YOR157C YFL034WP43564 1073 aa9.27□□□□□ -0.93
PUP1YOR157C NBP1P52919 319 aaPredicted RBP9.27□□□□□ -0.93
PUP1YOR157C FOB1O13329 566 aa9.26□□□□□ -0.93
PUP1YOR157C DSS4P32601 143 aa9.26□□□□□ -0.93
PUP1YOR157C KDX1P36005 433 aa9.26□□□□□ -0.93
PUP1YOR157C YER158CP40095 573 aa9.26□□□□□ -0.93
PUP1YOR157C COQ6P53318 479 aa9.26□□□□□ -0.93
PUP1YOR157C BRR2P32639 2163 aaKnown RBP9.26□□□□□ -0.93
PUP1YOR157C SCJ1P25303 377 aa9.25□□□□□ -0.93
PUP1YOR157C RFC5P38251 354 aa9.25□□□□□ -0.93
PUP1YOR157C SSP1P38871 571 aa9.25□□□□□ -0.93
PUP1YOR157C GEM1P39722 662 aa9.25□□□□□ -0.93
PUP1YOR157C DAK2P43550 591 aa9.25□□□□□ -0.93
PUP1YOR157C GUF1P46943 645 aa9.25□□□□□ -0.93
PUP1YOR157C YGL036WP53185 909 aaPredicted RBP9.25□□□□□ -0.93
PUP1YOR157C PIL1P53252 339 aaKnown RBP9.25□□□□□ -0.93
PUP1YOR157C NAM8Q00539 523 aaKnown RBP9.25□□□□□ -0.93
PUP1YOR157C CEF1Q03654 590 aaPredicted RBP9.25□□□□□ -0.93
PUP1YOR157C NAT1P12945 854 aaKnown RBP9.24□□□□□ -0.93
PUP1YOR157C URA1P28272 314 aaPredicted RBP9.24□□□□□ -0.93
PUP1YOR157C XRS2P33301 854 aa9.24□□□□□ -0.93
PUP1YOR157C STE13P33894 931 aa9.24□□□□□ -0.93
PUP1YOR157C DCW1P36091 449 aa9.24□□□□□ -0.93
PUP1YOR157C PPE1P38796 400 aa9.24□□□□□ -0.93
PUP1YOR157C FTR1P40088 404 aa9.24□□□□□ -0.93
PUP1YOR157C LCB2P40970 561 aa9.24□□□□□ -0.93
PUP1YOR157C SMC3P47037 1230 aa9.24□□□□□ -0.93
PUP1YOR157C MNN10P50108 393 aaKnown RBP9.24□□□□□ -0.93
PUP1YOR157C YPL014WQ02606 381 aa9.24□□□□□ -0.93
PUP1YOR157C HIS4P00815 799 aaKnown RBP9.23□□□□□ -0.93
PUP1YOR157C GAL10P04397 699 aa9.23□□□□□ -0.93
PUP1YOR157C TEC1P18412 486 aa9.23□□□□□ -0.93
PUP1YOR157C RRT12P25381 491 aa9.23□□□□□ -0.93
PUP1YOR157C TRK2P28584 889 aa9.23□□□□□ -0.93
PUP1YOR157C SLX5P32828 619 aaKnown RBP9.23□□□□□ -0.93
PUP1YOR157C YJR061WP40355 935 aa9.23□□□□□ -0.93
PUP1YOR157C TBF1Q02457 562 aa9.23□□□□□ -0.93
PUP1YOR157C EFB1P32471 206 aaKnown RBP9.22□□□□□ -0.93
PUP1YOR157C WBP1P33767 430 aaKnown RBP9.22□□□□□ -0.93
PUP1YOR157C YBR238CP38330 731 aaKnown RBP9.22□□□□□ -0.93
PUP1YOR157C UME6P39001 836 aa9.22□□□□□ -0.93
PUP1YOR157C KAP123P40069 1113 aaKnown RBP9.22□□□□□ -0.93
PUP1YOR157C DSE1P40077 573 aa9.22□□□□□ -0.93
PUP1YOR157C TIF34P40217 347 aaKnown RBP9.22□□□□□ -0.93
PUP1YOR157C CDC1P40986 491 aa9.22□□□□□ -0.93
PUP1YOR157C COG8Q04632 607 aa9.22□□□□□ -0.93
PUP1YOR157C PSK2Q08217 1101 aa9.22□□□□□ -0.93
PUP1YOR157C ABP140Q08641 628 aaKnown RBP9.22□□□□□ -0.93
PUP1YOR157C DDC1Q08949 612 aa9.22□□□□□ -0.93
PUP1YOR157C NBP2Q12163 236 aa9.22□□□□□ -0.93
PUP1YOR157C TRA1P38811 3744 aa9.21□□□□□ -0.93
PUP1YOR157C RNR1P21524 888 aaKnown RBP9.21□□□□□ -0.94
PUP1YOR157C DUN1P39009 513 aa9.21□□□□□ -0.94
PUP1YOR157C SAH1P39954 449 aaKnown RBP9.21□□□□□ -0.94
PUP1YOR157C UFE1P41834 346 aa9.21□□□□□ -0.94
PUP1YOR157C YJR054WP47114 497 aa9.21□□□□□ -0.94
PUP1YOR157C PEX13P80667 386 aa9.21□□□□□ -0.94
PUP1YOR157C MZM1Q03429 123 aaPredicted RBP9.21□□□□□ -0.94
PUP1YOR157C PSR2Q07949 397 aa9.21□□□□□ -0.94
PUP1YOR157C SPO21Q12411 609 aa9.21□□□□□ -0.94
PUP1YOR157C RGP1P16664 663 aa9.2□□□□□ -0.94
PUP1YOR157C PRP9P19736 530 aaKnown RBP9.2□□□□□ -0.94
PUP1YOR157C LRE1P25579 583 aaKnown RBP9.2□□□□□ -0.94
PUP1YOR157C LTP1P40347 161 aa9.2□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 89.4 ms