RNA–Protein interactions for RNA: YOR132W

VPS17, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS17, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS17YOR132W TFB2Q02939 513 aa4.31□□□□□ -1.72
VPS17YOR132W UTP14Q04500 899 aaKnown RBP4.31□□□□□ -1.72
VPS17YOR132W RPN7Q06103 429 aaKnown RBP4.31□□□□□ -1.72
VPS17YOR132W NOP14Q99207 810 aaKnown RBP4.31□□□□□ -1.72
VPS17YOR132W Q0142Q9ZZW4 58 aa4.31□□□□□ -1.72
VPS17YOR132W SFP1P32432 683 aa4.3□□□□□ -1.72
VPS17YOR132W ECM1P39715 212 aa4.3□□□□□ -1.72
VPS17YOR132W PRP31P49704 494 aaPredicted RBP4.3□□□□□ -1.72
VPS17YOR132W TGL5Q12043 749 aa4.3□□□□□ -1.72
VPS17YOR132W ATG11Q12527 1178 aa4.3□□□□□ -1.72
VPS17YOR132W TSC11P40061 1430 aa4.3□□□□□ -1.72
VPS17YOR132W VTH1P40438 1549 aa4.3□□□□□ -1.72
VPS17YOR132W VTH2P40890 1549 aa4.3□□□□□ -1.72
VPS17YOR132W LAT1P12695 482 aaKnown RBP4.29□□□□□ -1.72
VPS17YOR132W SFL1P20134 766 aa4.29□□□□□ -1.72
VPS17YOR132W YKR051WP36142 418 aa4.29□□□□□ -1.72
VPS17YOR132W MIP6P38760 659 aaKnown RBP4.29□□□□□ -1.72
VPS17YOR132W YNL193WP53870 558 aa4.29□□□□□ -1.72
VPS17YOR132W ADY4Q05955 493 aa4.29□□□□□ -1.72
VPS17YOR132W ATG33Q06485 197 aa4.29□□□□□ -1.72
VPS17YOR132W GIN4Q12263 1142 aa4.29□□□□□ -1.72
VPS17YOR132W SNT2P53127 1403 aa4.29□□□□□ -1.72
VPS17YOR132W MIH1P23748 554 aa4.29□□□□□ -1.72
VPS17YOR132W OAR1P35731 278 aa4.29□□□□□ -1.72
VPS17YOR132W YKR018CP36114 725 aa4.29□□□□□ -1.72
VPS17YOR132W YBR053CP38235 358 aa4.29□□□□□ -1.72
VPS17YOR132W GAD1Q04792 585 aa4.29□□□□□ -1.72
VPS17YOR132W OMS1Q06668 471 aa4.29□□□□□ -1.72
VPS17YOR132W MOH1P38191 138 aa4.28□□□□□ -1.72
VPS17YOR132W PCM1P38628 557 aaKnown RBP4.28□□□□□ -1.72
VPS17YOR132W UBC9P50623 157 aaPredicted RBP4.28□□□□□ -1.72
VPS17YOR132W AIM14P53109 570 aa4.28□□□□□ -1.72
VPS17YOR132W YLR001CQ07895 862 aa4.28□□□□□ -1.72
VPS17YOR132W ACF2Q12168 779 aa4.28□□□□□ -1.72
VPS17YOR132W CDC25P04821 1589 aa4.28□□□□□ -1.72
VPS17YOR132W SSB1P11484 613 aaKnown RBP4.27□□□□□ -1.73
VPS17YOR132W RPL8AP17076 256 aaKnown RBP4.27□□□□□ -1.73
VPS17YOR132W APT2P36973 181 aa4.27□□□□□ -1.73
VPS17YOR132W SSB2P40150 613 aaKnown RBP4.27□□□□□ -1.73
VPS17YOR132W YJL163CP46996 555 aa4.27□□□□□ -1.73
VPS17YOR132W DAS1P47005 663 aa4.27□□□□□ -1.73
VPS17YOR132W TY1B-JR2P47100 1755 aaKnown RBP4.27□□□□□ -1.73
VPS17YOR132W PCL10P53124 433 aa4.27□□□□□ -1.73
VPS17YOR132W TEX1P53851 422 aaKnown RBP4.27□□□□□ -1.73
VPS17YOR132W ARG5,6Q01217 863 aa4.27□□□□□ -1.73
VPS17YOR132W TIM44Q01852 431 aa4.27□□□□□ -1.73
VPS17YOR132W TY1B-ER2Q03619 1755 aa4.27□□□□□ -1.73
VPS17YOR132W ESC1Q03661 1658 aaKnown RBP4.27□□□□□ -1.73
VPS17YOR132W YMR206WQ03695 313 aa4.27□□□□□ -1.73
VPS17YOR132W TY1B-MR1Q04214 1755 aa4.27□□□□□ -1.73
VPS17YOR132W TY1B-MR2Q04670 1755 aaKnown RBP4.27□□□□□ -1.73
VPS17YOR132W TY1B-LR1Q12088 1755 aaKnown RBP4.27□□□□□ -1.73
VPS17YOR132W TY1B-NL1Q12112 1755 aa4.27□□□□□ -1.73
VPS17YOR132W TY1B-GR1Q12141 1755 aa4.27□□□□□ -1.73
VPS17YOR132W TY1B-BLQ12490 1755 aa4.27□□□□□ -1.73
VPS17YOR132W PAN1P32521 1480 aa4.26□□□□□ -1.73
VPS17YOR132W HMG1P12683 1054 aa4.26□□□□□ -1.73
VPS17YOR132W ADE2P21264 571 aaKnown RBP4.26□□□□□ -1.73
VPS17YOR132W APL2P36000 726 aaPredicted RBP4.26□□□□□ -1.73
VPS17YOR132W PPS1P38148 807 aa4.26□□□□□ -1.73
VPS17YOR132W PMC1P38929 1173 aaPredicted RBP4.26□□□□□ -1.73
VPS17YOR132W MET13P53128 600 aa4.26□□□□□ -1.73
VPS17YOR132W VPS15P22219 1454 aa4.26□□□□□ -1.73
VPS17YOR132W GRX4P32642 244 aa4.26□□□□□ -1.73
VPS17YOR132W TRZ1P36159 838 aaPredicted RBP4.26□□□□□ -1.73
VPS17YOR132W TPM2P40414 161 aa4.26□□□□□ -1.73
VPS17YOR132W MCM21Q06675 368 aa4.26□□□□□ -1.73
VPS17YOR132W GUD1Q07729 489 aa4.26□□□□□ -1.73
VPS17YOR132W MCH5Q08777 521 aa4.26□□□□□ -1.73
VPS17YOR132W CCR4P31384 837 aaKnown RBP4.25□□□□□ -1.73
VPS17YOR132W YHR112CP38716 378 aa4.25□□□□□ -1.73
VPS17YOR132W YHL017WP38745 532 aa4.25□□□□□ -1.73
VPS17YOR132W HOS4P40480 1083 aa4.25□□□□□ -1.73
VPS17YOR132W BAP3P41815 604 aa4.25□□□□□ -1.73
VPS17YOR132W STB4P50104 949 aa4.25□□□□□ -1.73
VPS17YOR132W UBA2P52488 636 aa4.25□□□□□ -1.73
VPS17YOR132W SDA1P53313 767 aaKnown RBP4.25□□□□□ -1.73
VPS17YOR132W DNM1P54861 757 aa4.25□□□□□ -1.73
VPS17YOR132W REC102Q02721 264 aa4.25□□□□□ -1.73
VPS17YOR132W CTK1Q03957 528 aaKnown RBP4.25□□□□□ -1.73
VPS17YOR132W YOL057WQ08225 711 aa4.25□□□□□ -1.73
VPS17YOR132W IRC13Q08630 104 aa4.25□□□□□ -1.73
VPS17YOR132W YBT1P32386 1661 aa4.25□□□□□ -1.73
VPS17YOR132W ADR1P07248 1323 aa4.24□□□□□ -1.73
VPS17YOR132W HIS7P33734 552 aaKnown RBP4.24□□□□□ -1.73
VPS17YOR132W NAB3P38996 802 aaKnown RBP RIP-Chip data4.24□□□□□ -1.73not detected
VPS17YOR132W MGS1P40151 587 aa4.24□□□□□ -1.73
VPS17YOR132W MDG1P53885 366 aa4.24□□□□□ -1.73
VPS17YOR132W IRC20Q06554 1556 aa4.23□□□□□ -1.73
VPS17YOR132W MNN4P36044 1178 aa4.23□□□□□ -1.73
VPS17YOR132W BCD1P38772 366 aa4.23□□□□□ -1.73
VPS17YOR132W REV7P38927 245 aa4.23□□□□□ -1.73
VPS17YOR132W HLJ1P48353 224 aa4.23□□□□□ -1.73
VPS17YOR132W UBC11P52492 156 aa4.23□□□□□ -1.73
VPS17YOR132W RIA1P53893 1110 aa4.23□□□□□ -1.73
VPS17YOR132W MUK1Q02866 612 aa4.23□□□□□ -1.73
VPS17YOR132W HBT1Q07653 1046 aaKnown RBP4.23□□□□□ -1.73
VPS17YOR132W CCT3P39077 534 aaKnown RBP4.22□□□□□ -1.73
VPS17YOR132W FMP52P40008 231 aa4.22□□□□□ -1.73
VPS17YOR132W GID8P40208 455 aa4.22□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms