RNA–Protein interactions for RNA: YOR106W

VAM3, Transcript of Syntaxin-like vacuolar t-SNARE, yeastyeast

Gene VAM3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM3YOR106W ERG6P25087 383 aaKnown RBP6.01□□□□□ -1.45
VAM3YOR106W GID8P40208 455 aa6.01□□□□□ -1.45
VAM3YOR106W MET13P53128 600 aa6.01□□□□□ -1.45
VAM3YOR106W SDA1P53313 767 aaKnown RBP6.01□□□□□ -1.45
VAM3YOR106W SMX3P54999 86 aaPredicted RBP6.01□□□□□ -1.45
VAM3YOR106W GPD1Q00055 391 aaKnown RBP6.01□□□□□ -1.45
VAM3YOR106W HMO1Q03973 246 aaKnown RBP6.01□□□□□ -1.45
VAM3YOR106W UTP14Q04500 899 aaKnown RBP6.01□□□□□ -1.45
VAM3YOR106W DIA2Q08496 732 aaPredicted RBP6□□□□□ -1.45
VAM3YOR106W CLF1Q12309 687 aaPredicted RBP6□□□□□ -1.45
VAM3YOR106W RPL8AP17076 256 aaKnown RBP5.99□□□□□ -1.45
VAM3YOR106W SSZ1P38788 538 aaKnown RBP5.99□□□□□ -1.45
VAM3YOR106W GET2P40056 285 aa5.99□□□□□ -1.45
VAM3YOR106W BRE5P53741 515 aaKnown RBP5.99□□□□□ -1.45
VAM3YOR106W LEE1Q02799 301 aaKnown RBP5.99□□□□□ -1.45
VAM3YOR106W HCA4P20448 770 aaKnown RBP5.98□□□□□ -1.45
VAM3YOR106W DMC1P25453 334 aa5.98□□□□□ -1.45
VAM3YOR106W YKR075CP36155 307 aa5.98□□□□□ -1.45
VAM3YOR106W TDP1P38319 544 aa5.98□□□□□ -1.45
VAM3YOR106W CRP1P38845 465 aaKnown RBP5.98□□□□□ -1.45
VAM3YOR106W HRB1P38922 454 aaKnown RBP RIP-Chip data5.98□□□□□ -1.45not detected
VAM3YOR106W NDC80P40460 691 aa5.98□□□□□ -1.45
VAM3YOR106W YJR039WP47107 1121 aa5.98□□□□□ -1.45
VAM3YOR106W ZRT2Q12436 422 aa5.98□□□□□ -1.45
VAM3YOR106W ECM3Q99252 613 aa5.98□□□□□ -1.45
VAM3YOR106W PEX1P24004 1043 aa5.97□□□□□ -1.45
VAM3YOR106W PHO11P35842 467 aa5.97□□□□□ -1.45
VAM3YOR106W PHO12P38693 467 aa5.97□□□□□ -1.45
VAM3YOR106W YJL206CP39529 758 aa5.97□□□□□ -1.45
VAM3YOR106W ARG2P40360 574 aa5.97□□□□□ -1.45
VAM3YOR106W NOP9P47077 666 aaKnown RBP5.97□□□□□ -1.45
VAM3YOR106W BFA1P47113 574 aa5.97□□□□□ -1.45
VAM3YOR106W DCS2Q12123 353 aa5.97□□□□□ -1.45
VAM3YOR106W MAL31P38156 614 aa5.96□□□□□ -1.46
VAM3YOR106W YHR202WP38887 602 aa5.96□□□□□ -1.46
VAM3YOR106W MGS1P40151 587 aa5.96□□□□□ -1.46
VAM3YOR106W YNL195CP40168 261 aa5.96□□□□□ -1.46
VAM3YOR106W RSC8P43609 557 aaKnown RBP5.96□□□□□ -1.46
VAM3YOR106W HLJ1P48353 224 aa5.96□□□□□ -1.46
VAM3YOR106W VPS73P53142 486 aaKnown RBP5.96□□□□□ -1.46
VAM3YOR106W FHN1P53279 174 aa5.96□□□□□ -1.46
VAM3YOR106W ISA1Q07821 250 aaPredicted RBP5.96□□□□□ -1.46
VAM3YOR106W MSL5Q12186 476 aaKnown RBP RIP-Chip data5.96□□□□□ -1.46not detected
VAM3YOR106W ADR1P07248 1323 aa5.96□□□□□ -1.46
VAM3YOR106W AKL1P38080 1108 aaKnown RBP5.95□□□□□ -1.46
VAM3YOR106W CTR1P49573 406 aa5.95□□□□□ -1.46
VAM3YOR106W ERG20P08524 352 aaKnown RBP5.94□□□□□ -1.46
VAM3YOR106W PIG2P40187 538 aa5.94□□□□□ -1.46
VAM3YOR106W ATG4P53867 494 aa5.94□□□□□ -1.46
VAM3YOR106W DNM1P54861 757 aa5.94□□□□□ -1.46
VAM3YOR106W RGC1Q06108 1083 aaKnown RBP5.94□□□□□ -1.46
VAM3YOR106W GLG1P36143 616 aa5.93□□□□□ -1.46
VAM3YOR106W BIT2P38346 545 aa5.93□□□□□ -1.46
VAM3YOR106W TDA3P38758 523 aa5.93□□□□□ -1.46
VAM3YOR106W BDH2P39713 417 aa5.93□□□□□ -1.46
VAM3YOR106W THI22Q06490 572 aa5.93□□□□□ -1.46
VAM3YOR106W MLH3Q12083 715 aa5.93□□□□□ -1.46
VAM3YOR106W USV1Q12132 391 aa5.93□□□□□ -1.46
VAM3YOR106W THR1P17423 357 aaKnown RBP5.92□□□□□ -1.46
VAM3YOR106W SEC15P22224 910 aa5.92□□□□□ -1.46
VAM3YOR106W CKB2P38930 258 aa5.92□□□□□ -1.46
VAM3YOR106W NUG1P40010 520 aaKnown RBP5.92□□□□□ -1.46
VAM3YOR106W RET2P43621 546 aa5.92□□□□□ -1.46
VAM3YOR106W TAH11P47112 604 aa5.92□□□□□ -1.46
VAM3YOR106W VHS3Q08438 674 aa5.92□□□□□ -1.46
VAM3YOR106W TAF3Q12297 353 aa5.92□□□□□ -1.46
VAM3YOR106W YIL166CP40445 542 aa5.91□□□□□ -1.46
VAM3YOR106W CCT7P42943 550 aaKnown RBP5.91□□□□□ -1.46
VAM3YOR106W YMR210WQ03649 449 aa5.91□□□□□ -1.46
VAM3YOR106W ABF1P14164 731 aa5.9□□□□□ -1.46
VAM3YOR106W PRP28P23394 588 aa5.9□□□□□ -1.46
VAM3YOR106W IMG2P25642 146 aaPredicted RBP5.9□□□□□ -1.46
VAM3YOR106W PRP19P32523 503 aaKnown RBP5.9□□□□□ -1.46
VAM3YOR106W BCS1P32839 456 aa5.9□□□□□ -1.46
VAM3YOR106W PPZ2P33329 710 aa5.9□□□□□ -1.46
VAM3YOR106W CHS5Q12114 671 aaKnown RBP5.9□□□□□ -1.46
VAM3YOR106W SUT2Q12286 268 aa5.9□□□□□ -1.46
VAM3YOR106W POM34Q12445 299 aa5.9□□□□□ -1.46
VAM3YOR106W YGR161W-CQ3E744 92 aa5.9□□□□□ -1.46
VAM3YOR106W PET127P32606 800 aa5.89□□□□□ -1.47
VAM3YOR106W FPR3P38911 411 aaKnown RBP5.89□□□□□ -1.47
VAM3YOR106W BEM4P39011 633 aa5.89□□□□□ -1.47
VAM3YOR106W ATF1P40353 525 aa5.89□□□□□ -1.47
VAM3YOR106W YJR096WP47137 282 aa5.89□□□□□ -1.47
VAM3YOR106W VBA4Q04602 768 aaKnown RBP5.89□□□□□ -1.47
VAM3YOR106W VPS36Q06696 566 aa5.89□□□□□ -1.47
VAM3YOR106W THI73Q07904 523 aa5.89□□□□□ -1.47
VAM3YOR106W RPS9BP05755 195 aaKnown RBP5.88□□□□□ -1.47
VAM3YOR106W FRS1P15624 595 aaKnown RBP5.88□□□□□ -1.47
VAM3YOR106W KIN82P25341 720 aa5.88□□□□□ -1.47
VAM3YOR106W CUE2P36075 443 aaKnown RBP5.88□□□□□ -1.47
VAM3YOR106W TYS1P36421 394 aaKnown RBP5.88□□□□□ -1.47
VAM3YOR106W YLR407WQ06070 228 aa5.88□□□□□ -1.47
VAM3YOR106W SPO11P23179 398 aa5.87□□□□□ -1.47
VAM3YOR106W SSD1P24276 1250 aaKnown RBP RIP-Chip data5.87□□□□□ -1.47not detected
VAM3YOR106W FEN2P25621 512 aaKnown RBP5.87□□□□□ -1.47
VAM3YOR106W YPT53P36019 220 aa5.87□□□□□ -1.47
VAM3YOR106W YIL077CP40508 320 aa5.87□□□□□ -1.47
VAM3YOR106W YJR142WP47173 342 aa5.87□□□□□ -1.47
VAM3YOR106W YGR153WP48238 217 aa5.87□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 80.6 ms