RNA–Protein interactions for RNA: YNL222W

SSU72, Transcript of Phosphatase and transcription/RNA-processing factor, yeastyeast

Gene SSU72, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSU72YNL222W HMO1Q03973 246 aaKnown RBP5.6□□□□□ -1.51
SSU72YNL222W YKL033W-AQ86ZR7 236 aa5.6□□□□□ -1.51
SSU72YNL222W ECM3Q99252 613 aa5.6□□□□□ -1.51
SSU72YNL222W APN2P38207 520 aa5.59□□□□□ -1.51
SSU72YNL222W GUD1Q07729 489 aa5.59□□□□□ -1.51
SSU72YNL222W PYC1P11154 1178 aaKnown RBP5.58□□□□□ -1.52
SSU72YNL222W SFP1P32432 683 aa5.58□□□□□ -1.52
SSU72YNL222W SET2P46995 733 aaKnown RBP5.58□□□□□ -1.52
SSU72YNL222W NOP9P47077 666 aaKnown RBP5.58□□□□□ -1.52
SSU72YNL222W YAP1802P53309 568 aa5.58□□□□□ -1.52
SSU72YNL222W SMX3P54999 86 aaPredicted RBP5.58□□□□□ -1.52
SSU72YNL222W DCS2Q12123 353 aa5.58□□□□□ -1.52
SSU72YNL222W KIN3P22209 435 aa5.57□□□□□ -1.52
SSU72YNL222W PHO11P35842 467 aa5.57□□□□□ -1.52
SSU72YNL222W PHO12P38693 467 aa5.57□□□□□ -1.52
SSU72YNL222W SSZ1P38788 538 aaKnown RBP5.57□□□□□ -1.52
SSU72YNL222W NMD2P38798 1089 aaKnown RBP5.57□□□□□ -1.52
SSU72YNL222W YJR039WP47107 1121 aa5.57□□□□□ -1.52
SSU72YNL222W SDA1P53313 767 aaKnown RBP5.57□□□□□ -1.52
SSU72YNL222W MSL5Q12186 476 aaKnown RBP RIP-Chip data5.57□□□□□ -1.52not detected
SSU72YNL222W ADR1P07248 1323 aa5.56□□□□□ -1.52
SSU72YNL222W TDP1P38319 544 aa5.56□□□□□ -1.52
SSU72YNL222W MGS1P40151 587 aa5.56□□□□□ -1.52
SSU72YNL222W FHN1P53279 174 aa5.56□□□□□ -1.52
SSU72YNL222W MLH3Q12083 715 aa5.56□□□□□ -1.52
SSU72YNL222W CDC43P18898 376 aa5.55□□□□□ -1.52
SSU72YNL222W AKL1P38080 1108 aaKnown RBP5.55□□□□□ -1.52
SSU72YNL222W CRP1P38845 465 aaKnown RBP5.55□□□□□ -1.52
SSU72YNL222W YHR202WP38887 602 aa5.55□□□□□ -1.52
SSU72YNL222W NDC80P40460 691 aa5.55□□□□□ -1.52
SSU72YNL222W DNM1P54861 757 aa5.55□□□□□ -1.52
SSU72YNL222W ISA1Q07821 250 aaPredicted RBP5.55□□□□□ -1.52
SSU72YNL222W SUT2Q12286 268 aa5.55□□□□□ -1.52
SSU72YNL222W PEX1P24004 1043 aa5.54□□□□□ -1.52
SSU72YNL222W NUG1P40010 520 aaKnown RBP5.54□□□□□ -1.52
SSU72YNL222W CCT7P42943 550 aaKnown RBP5.54□□□□□ -1.52
SSU72YNL222W RSC8P43609 557 aaKnown RBP5.54□□□□□ -1.52
SSU72YNL222W VPS73P53142 486 aaKnown RBP5.54□□□□□ -1.52
SSU72YNL222W ZRT2Q12436 422 aa5.54□□□□□ -1.52
SSU72YNL222W GFA1P14742 717 aaKnown RBP5.53□□□□□ -1.52
SSU72YNL222W YJL206CP39529 758 aa5.53□□□□□ -1.52
SSU72YNL222W GPD1Q00055 391 aaKnown RBP5.53□□□□□ -1.52
SSU72YNL222W YML122CQ03207 126 aa5.53□□□□□ -1.52
SSU72YNL222W THI22Q06490 572 aa5.53□□□□□ -1.52
SSU72YNL222W USV1Q12132 391 aa5.53□□□□□ -1.52
SSU72YNL222W THR1P17423 357 aaKnown RBP5.52□□□□□ -1.53
SSU72YNL222W VPS36Q06696 566 aa5.52□□□□□ -1.53
SSU72YNL222W DIA2Q08496 732 aaPredicted RBP5.52□□□□□ -1.53
SSU72YNL222W BCS1P32839 456 aa5.51□□□□□ -1.53
SSU72YNL222W YKR075CP36155 307 aa5.51□□□□□ -1.53
SSU72YNL222W UBS1P38290 277 aa5.51□□□□□ -1.53
SSU72YNL222W ARG2P40360 574 aa5.51□□□□□ -1.53
SSU72YNL222W TAH11P47112 604 aa5.51□□□□□ -1.53
SSU72YNL222W YJR096WP47137 282 aa5.51□□□□□ -1.53
SSU72YNL222W HLJ1P48353 224 aa5.51□□□□□ -1.53
SSU72YNL222W TAF3Q12297 353 aa5.51□□□□□ -1.53
SSU72YNL222W HCA4P20448 770 aaKnown RBP5.5□□□□□ -1.53
SSU72YNL222W IMG2P25642 146 aaPredicted RBP5.5□□□□□ -1.53
SSU72YNL222W TDA3P38758 523 aa5.5□□□□□ -1.53
SSU72YNL222W BEM4P39011 633 aa5.5□□□□□ -1.53
SSU72YNL222W YJR142WP47173 342 aa5.5□□□□□ -1.53
SSU72YNL222W CTR1P49573 406 aa5.5□□□□□ -1.53
SSU72YNL222W ATG4P53867 494 aa5.5□□□□□ -1.53
SSU72YNL222W UTP14Q04500 899 aaKnown RBP5.5□□□□□ -1.53
SSU72YNL222W VHS3Q08438 674 aa5.5□□□□□ -1.53
SSU72YNL222W SSD1P24276 1250 aaKnown RBP RIP-Chip data5.49□□□□□ -1.53not detected
SSU72YNL222W DMC1P25453 334 aa5.49□□□□□ -1.53
SSU72YNL222W PRP19P32523 503 aaKnown RBP5.49□□□□□ -1.53
SSU72YNL222W SET3P36124 751 aa5.49□□□□□ -1.53
SSU72YNL222W GLG1P36143 616 aa5.49□□□□□ -1.53
SSU72YNL222W MAL31P38156 614 aa5.49□□□□□ -1.53
SSU72YNL222W BIT2P38346 545 aa5.49□□□□□ -1.53
SSU72YNL222W CKB2P38930 258 aa5.49□□□□□ -1.53
SSU72YNL222W BDH2P39713 417 aa5.49□□□□□ -1.53
SSU72YNL222W PIG2P40187 538 aa5.49□□□□□ -1.53
SSU72YNL222W CLF1Q12309 687 aaPredicted RBP5.49□□□□□ -1.53
SSU72YNL222W ERG20P08524 352 aaKnown RBP5.48□□□□□ -1.53
SSU72YNL222W SEC6P32844 805 aa5.48□□□□□ -1.53
SSU72YNL222W PPZ2P33329 710 aa5.48□□□□□ -1.53
SSU72YNL222W ATF1P40353 525 aa5.48□□□□□ -1.53
SSU72YNL222W RET2P43621 546 aa5.48□□□□□ -1.53
SSU72YNL222W YLR407WQ06070 228 aa5.48□□□□□ -1.53
SSU72YNL222W THI73Q07904 523 aa5.48□□□□□ -1.53
SSU72YNL222W CHS5Q12114 671 aaKnown RBP5.48□□□□□ -1.53
SSU72YNL222W BNR1P40450 1375 aa5.47□□□□□ -1.53
SSU72YNL222W FRS1P15624 595 aaKnown RBP5.47□□□□□ -1.53
SSU72YNL222W FEN2P25621 512 aaKnown RBP5.47□□□□□ -1.53
SSU72YNL222W BFA1P47113 574 aa5.47□□□□□ -1.53
SSU72YNL222W RFX1P48743 811 aa5.47□□□□□ -1.53
SSU72YNL222W RCR2Q03446 210 aaKnown RBP5.47□□□□□ -1.53
SSU72YNL222W YMR210WQ03649 449 aa5.47□□□□□ -1.53
SSU72YNL222W POM34Q12445 299 aa5.47□□□□□ -1.53
SSU72YNL222W PET127P32606 800 aa5.46□□□□□ -1.54
SSU72YNL222W PEX2P32800 271 aa5.46□□□□□ -1.54
SSU72YNL222W YKU70P32807 602 aa5.46□□□□□ -1.54
SSU72YNL222W TYS1P36421 394 aaKnown RBP5.46□□□□□ -1.54
SSU72YNL222W YIL077CP40508 320 aa5.46□□□□□ -1.54
SSU72YNL222W YGR153WP48238 217 aa5.46□□□□□ -1.54
SSU72YNL222W LGE1Q02796 332 aaKnown RBP5.46□□□□□ -1.54
SSU72YNL222W PRP28P23394 588 aa5.45□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms