RNA–Protein interactions for RNA: YML107C

PML39, Transcript of Protein required for nuclear retention of unspliced pre-mRNAs, yeast

Gene PML39, Length 1,005 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PML39	YML107C	ADY4	Q05955	493 aa		5.06	□□□□□ -1.6
PML39	YML107C	SGO1	Q08490	590 aa		5.06	□□□□□ -1.6
PML39	YML107C	OAF1	P39720	1047 aa	Predicted RBP	5.05	□□□□□ -1.6
PML39	YML107C	SLI1	P53304	468 aa		5.05	□□□□□ -1.6
PML39	YML107C	DIA2	Q08496	732 aa	Predicted RBP	5.05	□□□□□ -1.6
PML39	YML107C	IRC13	Q08630	104 aa		5.05	□□□□□ -1.6
PML39	YML107C	RNR1	P21524	888 aa	Known RBP	5.04	□□□□□ -1.6
PML39	YML107C	MVD1	P32377	396 aa	Known RBP	5.04	□□□□□ -1.6
PML39	YML107C	DID4	P36108	232 aa		5.04	□□□□□ -1.6
PML39	YML107C	AKL1	P38080	1108 aa	Known RBP	5.04	□□□□□ -1.6
PML39	YML107C	REV7	P38927	245 aa		5.04	□□□□□ -1.6
PML39	YML107C	CCT3	P39077	534 aa	Known RBP	5.04	□□□□□ -1.6
PML39	YML107C	NUG1	P40010	520 aa	Known RBP	5.04	□□□□□ -1.6
PML39	YML107C	CCT5	P40413	562 aa	Known RBP	5.04	□□□□□ -1.6
PML39	YML107C	MNN11	P46985	422 aa	Known RBP	5.04	□□□□□ -1.6
PML39	YML107C	DAS1	P47005	663 aa		5.04	□□□□□ -1.6
PML39	YML107C	MTL1	P53214	551 aa		5.04	□□□□□ -1.6
PML39	YML107C	PTA1	Q01329	785 aa	Predicted RBP	5.04	□□□□□ -1.6
PML39	YML107C	YHM2	Q04013	314 aa		5.04	□□□□□ -1.6
PML39	YML107C	SEC15	P22224	910 aa		5.03	□□□□□ -1.6
PML39	YML107C	SEC65	P29478	273 aa		5.03	□□□□□ -1.6
PML39	YML107C	PPS1	P38148	807 aa		5.03	□□□□□ -1.6
PML39	YML107C	BCD1	P38772	366 aa		5.03	□□□□□ -1.6
PML39	YML107C	GID8	P40208	455 aa		5.03	□□□□□ -1.6
PML39	YML107C	HOS4	P40480	1083 aa		5.03	□□□□□ -1.6
PML39	YML107C	CTF4	Q01454	927 aa		5.03	□□□□□ -1.6
PML39	YML107C	TIM44	Q01852	431 aa		5.03	□□□□□ -1.6
PML39	YML107C	ECM9	Q02202	377 aa		5.03	□□□□□ -1.6
PML39	YML107C	VHS3	Q08438	674 aa		5.03	□□□□□ -1.6
PML39	YML107C	ECM3	Q99252	613 aa		5.03	□□□□□ -1.6
PML39	YML107C	ERG20	P08524	352 aa	Known RBP	5.02	□□□□□ -1.61
PML39	YML107C	SSB1	P11484	613 aa	Known RBP	5.02	□□□□□ -1.61
PML39	YML107C	IMG2	P25642	146 aa	Predicted RBP	5.02	□□□□□ -1.61
PML39	YML107C	NUP60	P39705	539 aa		5.02	□□□□□ -1.61
PML39	YML107C	SSB2	P40150	613 aa	Known RBP	5.02	□□□□□ -1.61
PML39	YML107C	YNL195C	P40168	261 aa		5.02	□□□□□ -1.61
PML39	YML107C	BAP3	P41815	604 aa		5.02	□□□□□ -1.61
PML39	YML107C	UBC11	P52492	156 aa		5.02	□□□□□ -1.61
PML39	YML107C	YLR407W	Q06070	228 aa		5.02	□□□□□ -1.61
PML39	YML107C	TRE2	Q08693	809 aa		5.02	□□□□□ -1.61
PML39	YML107C	HRP1	Q99383	534 aa	Known RBP	5.02	□□□□□ -1.61
PML39	YML107C	ERG6	P25087	383 aa	Known RBP	5.01	□□□□□ -1.61
PML39	YML107C	FMO1	P38866	432 aa		5.01	□□□□□ -1.61
PML39	YML107C	BEM4	P39011	633 aa		5.01	□□□□□ -1.61
PML39	YML107C	FMP52	P40008	231 aa		5.01	□□□□□ -1.61
PML39	YML107C	HMO1	Q03973	246 aa	Known RBP	5.01	□□□□□ -1.61
PML39	YML107C	OMS1	Q06668	471 aa		5.01	□□□□□ -1.61
PML39	YML107C	ACF2	Q12168	779 aa		5.01	□□□□□ -1.61
PML39	YML107C	RPS21B	Q3E754	87 aa	Known RBP	5.01	□□□□□ -1.61
PML39	YML107C	PET127	P32606	800 aa		5	□□□□□ -1.61
PML39	YML107C	LYS9	P38999	446 aa		5	□□□□□ -1.61
PML39	YML107C	DUN1	P39009	513 aa		5	□□□□□ -1.61
PML39	YML107C	NOP9	P47077	666 aa	Known RBP	5	□□□□□ -1.61
PML39	YML107C	RIA1	P53893	1110 aa		5	□□□□□ -1.61
PML39	YML107C	VBA4	Q04602	768 aa	Known RBP	5	□□□□□ -1.61
PML39	YML107C	TMA17	Q12513	150 aa		5	□□□□□ -1.61
PML39	YML107C	RMP1	Q12530	201 aa		5	□□□□□ -1.61
PML39	YML107C	YKL033W-A	Q86ZR7	236 aa		5	□□□□□ -1.61
PML39	YML107C	RPS9B	P05755	195 aa	Known RBP	4.99	□□□□□ -1.61
PML39	YML107C	SWI6	P09959	803 aa		4.99	□□□□□ -1.61
PML39	YML107C	FRS1	P15624	595 aa	Known RBP	4.99	□□□□□ -1.61
PML39	YML107C	PEX1	P24004	1043 aa		4.99	□□□□□ -1.61
PML39	YML107C	YKU70	P32807	602 aa		4.99	□□□□□ -1.61
PML39	YML107C	YPT53	P36019	220 aa		4.99	□□□□□ -1.61
PML39	YML107C	YHL017W	P38745	532 aa		4.99	□□□□□ -1.61
PML39	YML107C	SFB3	P38810	929 aa		4.99	□□□□□ -1.61
PML39	YML107C	CHS7	P38843	316 aa		4.99	□□□□□ -1.61
PML39	YML107C	HXT6	P39003	570 aa	Known RBP	4.99	□□□□□ -1.61
PML39	YML107C	HXT7	P39004	570 aa		4.99	□□□□□ -1.61
PML39	YML107C	GET2	P40056	285 aa		4.99	□□□□□ -1.61
PML39	YML107C	RSC8	P43609	557 aa	Known RBP	4.99	□□□□□ -1.61
PML39	YML107C	HBT1	Q07653	1046 aa	Known RBP	4.99	□□□□□ -1.61
PML39	YML107C	MCH5	Q08777	521 aa		4.99	□□□□□ -1.61
PML39	YML107C	EUG1	P32474	517 aa		4.98	□□□□□ -1.61
PML39	YML107C	OAF3	P36023	863 aa		4.98	□□□□□ -1.61
PML39	YML107C	CBR1	P38626	284 aa	Known RBP	4.98	□□□□□ -1.61
PML39	YML107C	PCL5	P38794	229 aa		4.98	□□□□□ -1.61
PML39	YML107C	PAN2	P53010	1115 aa	Predicted RBP	4.98	□□□□□ -1.61
PML39	YML107C	TEL2	P53038	688 aa		4.98	□□□□□ -1.61
PML39	YML107C	YAP1802	P53309	568 aa		4.98	□□□□□ -1.61
PML39	YML107C	NOP15	P53927	220 aa	Predicted RBP	4.98	□□□□□ -1.61
PML39	YML107C	SSL2	Q00578	843 aa		4.98	□□□□□ -1.61
PML39	YML107C	HFI1	Q12060	488 aa		4.98	□□□□□ -1.61
PML39	YML107C	CLF1	Q12309	687 aa	Predicted RBP	4.98	□□□□□ -1.61
PML39	YML107C	ZRT2	Q12436	422 aa		4.98	□□□□□ -1.61
PML39	YML107C	RPS17A	P02407	136 aa	Known RBP	4.97	□□□□□ -1.61
PML39	YML107C	RPS21A	P0C0V8	87 aa	Known RBP	4.97	□□□□□ -1.61
PML39	YML107C	GLN4	P13188	809 aa	Known RBP	4.97	□□□□□ -1.61
PML39	YML107C	RPS17B	P14127	136 aa	Known RBP	4.97	□□□□□ -1.61
PML39	YML107C	AEP2	P22136	580 aa		4.97	□□□□□ -1.61
PML39	YML107C	KIN82	P25341	720 aa		4.97	□□□□□ -1.61
PML39	YML107C	HIR1	P32479	840 aa		4.97	□□□□□ -1.61
PML39	YML107C	DUG1	P43616	481 aa	Known RBP	4.97	□□□□□ -1.61
PML39	YML107C	RNR4	P49723	345 aa	Known RBP	4.97	□□□□□ -1.61
PML39	YML107C	STB4	P50104	949 aa		4.97	□□□□□ -1.61
PML39	YML107C	UBA2	P52488	636 aa		4.97	□□□□□ -1.61
PML39	YML107C	MUK1	Q02866	612 aa		4.97	□□□□□ -1.61
PML39	YML107C	VPS36	Q06696	566 aa		4.97	□□□□□ -1.61
PML39	YML107C	YPR027C	Q12079	277 aa		4.97	□□□□□ -1.61
PML39	YML107C	POM34	Q12445	299 aa		4.97	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms