RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C MIC19P43594 170 aa9.68□□□□□ -0.86
SEC61YLR378C INP52P50942 1183 aa9.68□□□□□ -0.86
SEC61YLR378C YGR130CP53278 816 aa9.68□□□□□ -0.86
SEC61YLR378C NOP13P53883 403 aaKnown RBP RIP-Chip data9.68□□□□□ -0.86not detected
SEC61YLR378C MTG1Q03151 367 aaPredicted RBP9.68□□□□□ -0.86
SEC61YLR378C GYL1Q04322 720 aa9.68□□□□□ -0.86
SEC61YLR378C LAA1P39526 2014 aa9.68□□□□□ -0.86
SEC61YLR378C JIP3O13555 125 aa9.67□□□□□ -0.86
SEC61YLR378C SEG2P34250 1132 aa9.67□□□□□ -0.86
SEC61YLR378C MUD2P36084 527 aaKnown RBP9.67□□□□□ -0.86
SEC61YLR378C YMC2P38087 329 aa9.67□□□□□ -0.86
SEC61YLR378C TBS1P38114 1094 aa9.67□□□□□ -0.86
SEC61YLR378C TIF5P38431 405 aaKnown RBP9.67□□□□□ -0.86
SEC61YLR378C CIN4P39110 191 aa9.67□□□□□ -0.86
SEC61YLR378C ASG1P40467 964 aa9.67□□□□□ -0.86
SEC61YLR378C YJR054WP47114 497 aa9.67□□□□□ -0.86
SEC61YLR378C GCV2P49095 1034 aa9.67□□□□□ -0.86
SEC61YLR378C VPS62P53285 467 aa9.67□□□□□ -0.86
SEC61YLR378C RNT1Q02555 471 aa9.67□□□□□ -0.86
SEC61YLR378C YMR187CQ03236 431 aa9.67□□□□□ -0.86
SEC61YLR378C SXM1Q04175 944 aaKnown RBP9.67□□□□□ -0.86
SEC61YLR378C IVY1Q04934 453 aa9.67□□□□□ -0.86
SEC61YLR378C BI2P03873 423 aa9.66□□□□□ -0.86
SEC61YLR378C BI4P03879 638 aa9.66□□□□□ -0.86
SEC61YLR378C HEM1P09950 548 aaPredicted RBP9.66□□□□□ -0.86
SEC61YLR378C PDR1P12383 1068 aa9.66□□□□□ -0.86
SEC61YLR378C FUB1P25659 250 aa9.66□□□□□ -0.86
SEC61YLR378C INP51P40559 946 aaKnown RBP9.66□□□□□ -0.86
SEC61YLR378C UTP6Q02354 440 aaKnown RBP9.66□□□□□ -0.86
SEC61YLR378C MZM1Q03429 123 aaPredicted RBP9.66□□□□□ -0.86
SEC61YLR378C TDA9Q04545 1251 aa9.66□□□□□ -0.86
SEC61YLR378C YOR059CQ08448 450 aaKnown RBP9.66□□□□□ -0.86
SEC61YLR378C YPR027CQ12079 277 aa9.66□□□□□ -0.86
SEC61YLR378C CTF3Q12748 733 aa9.66□□□□□ -0.86
SEC61YLR378C BI3Q9ZZW7 517 aa9.66□□□□□ -0.86
SEC61YLR378C KDX1P36005 433 aa9.65□□□□□ -0.86
SEC61YLR378C UBX7P38349 436 aa9.65□□□□□ -0.86
SEC61YLR378C MMS21P38632 267 aa9.65□□□□□ -0.86
SEC61YLR378C QNS1P38795 714 aaKnown RBP9.65□□□□□ -0.86
SEC61YLR378C SSP1P38871 571 aa9.65□□□□□ -0.86
SEC61YLR378C MVP1P40959 511 aaKnown RBP9.65□□□□□ -0.86
SEC61YLR378C RIM8P53179 542 aa9.65□□□□□ -0.86
SEC61YLR378C NOG2P53742 486 aaKnown RBP9.65□□□□□ -0.86
SEC61YLR378C RPL22BP56628 122 aaKnown RBP9.65□□□□□ -0.86
SEC61YLR378C CDD1Q06549 142 aa9.65□□□□□ -0.86
SEC61YLR378C DNL4Q08387 944 aaPredicted RBP9.65□□□□□ -0.86
SEC61YLR378C TRE1Q08919 783 aa9.65□□□□□ -0.86
SEC61YLR378C RUD3Q12234 484 aaKnown RBP9.65□□□□□ -0.86
SEC61YLR378C RAD1P06777 1100 aa9.65□□□□□ -0.87
SEC61YLR378C CHS1P08004 1131 aa9.65□□□□□ -0.87
SEC61YLR378C KAR3P17119 729 aa9.65□□□□□ -0.87
SEC61YLR378C VPS3P23643 1011 aa9.65□□□□□ -0.87
SEC61YLR378C VBA3P25594 458 aa9.65□□□□□ -0.87
SEC61YLR378C CAP1P28495 268 aaKnown RBP9.65□□□□□ -0.87
SEC61YLR378C UIP5P36137 443 aa9.65□□□□□ -0.87
SEC61YLR378C VBA5P36172 582 aa9.65□□□□□ -0.87
SEC61YLR378C LDH1P38139 375 aa9.65□□□□□ -0.87
SEC61YLR378C ECM2P38241 364 aaKnown RBP9.65□□□□□ -0.87
SEC61YLR378C PCM1P38628 557 aaKnown RBP9.65□□□□□ -0.87
SEC61YLR378C APM2P38700 605 aa9.65□□□□□ -0.87
SEC61YLR378C END3P39013 349 aa9.65□□□□□ -0.87
SEC61YLR378C TMN3P40071 706 aa9.65□□□□□ -0.87
SEC61YLR378C SNZ3P43545 298 aa9.65□□□□□ -0.87
SEC61YLR378C PUS2P53167 370 aa9.65□□□□□ -0.87
SEC61YLR378C SNZ2P53824 298 aa9.65□□□□□ -0.87
SEC61YLR378C SNU56Q03782 492 aaKnown RBP9.65□□□□□ -0.87
SEC61YLR378C TIF35Q04067 274 aaKnown RBP9.65□□□□□ -0.87
SEC61YLR378C UFO1Q04511 668 aa9.65□□□□□ -0.87
SEC61YLR378C STE23Q06010 1027 aa9.65□□□□□ -0.87
SEC61YLR378C EST1P17214 699 aaPredicted RBP9.64□□□□□ -0.87
SEC61YLR378C RSA4P25382 515 aaKnown RBP9.64□□□□□ -0.87
SEC61YLR378C YHL026CP38740 315 aa9.64□□□□□ -0.87
SEC61YLR378C TVP23P38962 199 aa9.64□□□□□ -0.87
SEC61YLR378C ZAP1P47043 880 aa9.64□□□□□ -0.87
SEC61YLR378C YML6P51998 286 aa9.64□□□□□ -0.87
SEC61YLR378C ARO80Q04052 950 aa9.64□□□□□ -0.87
SEC61YLR378C YDR524C-BQ3E6R4 66 aa9.64□□□□□ -0.87
SEC61YLR378C TUB3P09734 445 aaKnown RBP9.63□□□□□ -0.87
SEC61YLR378C TIF1P10081 395 aaKnown RBP9.63□□□□□ -0.87
SEC61YLR378C SPO16P17122 198 aa9.63□□□□□ -0.87
SEC61YLR378C TRX1P22217 103 aaKnown RBP9.63□□□□□ -0.87
SEC61YLR378C CYS3P31373 394 aaKnown RBP9.63□□□□□ -0.87
SEC61YLR378C RPC37P36121 282 aa9.63□□□□□ -0.87
SEC61YLR378C SHE3P38272 425 aaKnown RBP9.63□□□□□ -0.87
SEC61YLR378C YNL320WP42840 284 aa9.63□□□□□ -0.87
SEC61YLR378C YDR278CQ05612 105 aa9.63□□□□□ -0.87
SEC61YLR378C SDH5Q08230 162 aa9.63□□□□□ -0.87
SEC61YLR378C YOR022CQ12204 715 aa9.63□□□□□ -0.87
SEC61YLR378C PUT4P15380 627 aa9.62□□□□□ -0.87
SEC61YLR378C PRP9P19736 530 aaKnown RBP9.62□□□□□ -0.87
SEC61YLR378C SFL1P20134 766 aa9.62□□□□□ -0.87
SEC61YLR378C GCD6P32501 712 aaKnown RBP9.62□□□□□ -0.87
SEC61YLR378C MRP4P32902 394 aa9.62□□□□□ -0.87
SEC61YLR378C CSE2P33308 149 aa9.62□□□□□ -0.87
SEC61YLR378C CCL1P37366 393 aa9.62□□□□□ -0.87
SEC61YLR378C YBL036CP38197 257 aa9.62□□□□□ -0.87
SEC61YLR378C YMR134WP40207 237 aa9.62□□□□□ -0.87
SEC61YLR378C ESL1P40456 1118 aa9.62□□□□□ -0.87
SEC61YLR378C INA22P40576 216 aa9.62□□□□□ -0.87
SEC61YLR378C YJR039WP47107 1121 aa9.62□□□□□ -0.87
Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms