RNA–Protein interactions for RNA: YKR101W

SIR1, Transcript of Protein involved in silencing at mating-type loci HML and HMR, yeastyeast

Gene SIR1, Length 1,965 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR1YKR101W MAD3P47074 515 aa5.39□□□□□ -1.55
SIR1YKR101W MTR3P48240 250 aaPredicted RBP5.39□□□□□ -1.55
SIR1YKR101W NSG2P53898 299 aa5.39□□□□□ -1.55
SIR1YKR101W ENT2Q05785 613 aa5.39□□□□□ -1.55
SIR1YKR101W ARP7Q12406 477 aa5.39□□□□□ -1.55
SIR1YKR101W YEL076C-AP0CX16 216 aa5.38□□□□□ -1.55
SIR1YKR101W YLR464WP0CX17 216 aa5.38□□□□□ -1.55
SIR1YKR101W YEL076CP39971 216 aa5.38□□□□□ -1.55
SIR1YKR101W SCS2P40075 244 aaKnown RBP5.38□□□□□ -1.55
SIR1YKR101W TAF1P46677 1066 aa5.38□□□□□ -1.55
SIR1YKR101W YMR210WQ03649 449 aa5.38□□□□□ -1.55
SIR1YKR101W UPC2Q12151 913 aa5.38□□□□□ -1.55
SIR1YKR101W ADP1P25371 1049 aa5.38□□□□□ -1.55
SIR1YKR101W MSH1P25846 959 aa5.38□□□□□ -1.55
SIR1YKR101W TAT1P38085 619 aa5.38□□□□□ -1.55
SIR1YKR101W MSS4P38994 779 aa5.38□□□□□ -1.55
SIR1YKR101W GID8P40208 455 aa5.38□□□□□ -1.55
SIR1YKR101W AIM21P40563 679 aa5.38□□□□□ -1.55
SIR1YKR101W IMA5P40884 581 aa5.38□□□□□ -1.55
SIR1YKR101W GCV2P49095 1034 aa5.38□□□□□ -1.55
SIR1YKR101W PSP2P50109 593 aaKnown RBP5.38□□□□□ -1.55
SIR1YKR101W YMR187CQ03236 431 aa5.38□□□□□ -1.55
SIR1YKR101W PLB2Q03674 706 aa5.38□□□□□ -1.55
SIR1YKR101W TUB3P09734 445 aaKnown RBP5.37□□□□□ -1.55
SIR1YKR101W SAW1P39735 261 aa5.37□□□□□ -1.55
SIR1YKR101W NOC2P39744 710 aaKnown RBP5.37□□□□□ -1.55
SIR1YKR101W VPS27P40343 622 aaKnown RBP5.37□□□□□ -1.55
SIR1YKR101W URM1P40554 99 aaPredicted RBP5.37□□□□□ -1.55
SIR1YKR101W MAD2P40958 196 aa5.37□□□□□ -1.55
SIR1YKR101W ARC35P53731 342 aaKnown RBP5.37□□□□□ -1.55
SIR1YKR101W ADY3Q07732 790 aa5.37□□□□□ -1.55
SIR1YKR101W ISA1Q07821 250 aaPredicted RBP5.37□□□□□ -1.55
SIR1YKR101W YDR056CQ12025 205 aa5.37□□□□□ -1.55
SIR1YKR101W ACO1P19414 778 aaKnown RBP RIP-Chip data5.36□□□□□ -1.55not detected
SIR1YKR101W GBP2P25555 427 aaKnown RBP RIP-Chip data5.36□□□□□ -1.55not detected
SIR1YKR101W TGL1P34163 548 aa5.36□□□□□ -1.55
SIR1YKR101W APM3P38153 483 aa5.36□□□□□ -1.55
SIR1YKR101W APN2P38207 520 aa5.36□□□□□ -1.55
SIR1YKR101W SWD1P39706 426 aa5.36□□□□□ -1.55
SIR1YKR101W VHR1P40522 640 aa5.36□□□□□ -1.55
SIR1YKR101W YGR130CP53278 816 aa5.36□□□□□ -1.55
SIR1YKR101W ORC4P54791 529 aa5.36□□□□□ -1.55
SIR1YKR101W TPO1Q07824 586 aa5.36□□□□□ -1.55
SIR1YKR101W MCH5Q08777 521 aa5.36□□□□□ -1.55
SIR1YKR101W PSF3Q12146 194 aa5.36□□□□□ -1.55
SIR1YKR101W DGR2P32330 852 aa5.36□□□□□ -1.55
SIR1YKR101W COQ2P32378 372 aa5.36□□□□□ -1.55
SIR1YKR101W DUN1P39009 513 aa5.36□□□□□ -1.55
SIR1YKR101W MNT3P40549 630 aa5.36□□□□□ -1.55
SIR1YKR101W IML2P47031 731 aa5.36□□□□□ -1.55
SIR1YKR101W BNA1P47096 177 aa5.36□□□□□ -1.55
SIR1YKR101W MEP3P53390 489 aa5.36□□□□□ -1.55
SIR1YKR101W ASI2P53895 289 aa5.36□□□□□ -1.55
SIR1YKR101W BLS1Q06071 122 aa5.36□□□□□ -1.55
SIR1YKR101W DIN7Q12086 430 aa5.36□□□□□ -1.55
SIR1YKR101W ADE2P21264 571 aaKnown RBP5.35□□□□□ -1.55
SIR1YKR101W ATG19P35193 415 aa5.35□□□□□ -1.55
SIR1YKR101W PZF1P39933 429 aa5.35□□□□□ -1.55
SIR1YKR101W GTF1P53260 183 aaPredicted RBP5.35□□□□□ -1.55
SIR1YKR101W YPL034WQ03083 165 aa5.35□□□□□ -1.55
SIR1YKR101W NEW1Q08972 1196 aaKnown RBP5.35□□□□□ -1.55
SIR1YKR101W NCP1P16603 691 aaKnown RBP5.35□□□□□ -1.55
SIR1YKR101W PSY4P38193 441 aa5.35□□□□□ -1.55
SIR1YKR101W SKN7P38889 622 aa5.35□□□□□ -1.55
SIR1YKR101W YNL195CP40168 261 aa5.35□□□□□ -1.55
SIR1YKR101W EXG2P52911 562 aa5.35□□□□□ -1.55
SIR1YKR101W MNT2P53059 558 aa5.35□□□□□ -1.55
SIR1YKR101W SLU7Q02775 382 aaKnown RBP5.35□□□□□ -1.55
SIR1YKR101W CBP3P21560 335 aa5.34□□□□□ -1.55
SIR1YKR101W GFD2P25370 566 aaKnown RBP5.34□□□□□ -1.55
SIR1YKR101W SEC21P32074 935 aaKnown RBP5.34□□□□□ -1.55
SIR1YKR101W YPT7P32939 208 aa5.34□□□□□ -1.55
SIR1YKR101W BUD8P41698 603 aa5.34□□□□□ -1.55
SIR1YKR101W ORC3P54790 616 aa5.34□□□□□ -1.55
SIR1YKR101W MDM1Q01846 1127 aa5.34□□□□□ -1.55
SIR1YKR101W EIS1Q05050 843 aaKnown RBP5.34□□□□□ -1.55
SIR1YKR101W VPS36Q06696 566 aa5.34□□□□□ -1.55
SIR1YKR101W VHS3Q08438 674 aa5.34□□□□□ -1.55
SIR1YKR101W KCS1Q12494 1050 aa5.34□□□□□ -1.55
SIR1YKR101W VAS1P07806 1104 aaKnown RBP5.33□□□□□ -1.56
SIR1YKR101W PYC1P11154 1178 aaKnown RBP5.33□□□□□ -1.56
SIR1YKR101W SED4P25365 1065 aa5.33□□□□□ -1.56
SIR1YKR101W MTC7P32633 139 aa5.33□□□□□ -1.56
SIR1YKR101W ETP1P38748 585 aaKnown RBP5.33□□□□□ -1.56
SIR1YKR101W HOS4P40480 1083 aa5.33□□□□□ -1.56
SIR1YKR101W MET12P46151 657 aa5.33□□□□□ -1.56
SIR1YKR101W PRP31P49704 494 aaPredicted RBP5.33□□□□□ -1.56
SIR1YKR101W NCS6P53088 359 aa5.33□□□□□ -1.56
SIR1YKR101W YRB30P53107 440 aaPredicted RBP5.33□□□□□ -1.56
SIR1YKR101W YNR071CP53757 342 aa5.33□□□□□ -1.56
SIR1YKR101W ARG5,6Q01217 863 aa5.33□□□□□ -1.56
SIR1YKR101W ROT1Q03691 256 aa5.33□□□□□ -1.56
SIR1YKR101W YDL177CQ12257 170 aa5.33□□□□□ -1.56
SIR1YKR101W CYC7P00045 113 aa5.33□□□□□ -1.56
SIR1YKR101W CDC6P09119 513 aa5.33□□□□□ -1.56
SIR1YKR101W HSC82P15108 705 aaKnown RBP5.33□□□□□ -1.56
SIR1YKR101W FRS1P15624 595 aaKnown RBP5.33□□□□□ -1.56
SIR1YKR101W SDS22P36047 338 aa5.33□□□□□ -1.56
SIR1YKR101W KAE1P36132 386 aa5.33□□□□□ -1.56
SIR1YKR101W LAM1P38851 1228 aa5.33□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms