RNA–Protein interactions for RNA: YKL028W

TFA1, Transcript of TFIIE large subunit, yeast

Gene TFA1, Length 1,449 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFA1	YKL028W	MRPL19	P53875	158 aa		4.89	□□□□□ -1.63
TFA1	YKL028W	TAF11	Q04226	346 aa		4.89	□□□□□ -1.63
TFA1	YKL028W	YKU80	Q04437	629 aa		4.89	□□□□□ -1.63
TFA1	YKL028W	YPL260W	Q08977	551 aa		4.89	□□□□□ -1.63
TFA1	YKL028W	ARP7	Q12406	477 aa		4.89	□□□□□ -1.63
TFA1	YKL028W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
TFA1	YKL028W	RPS21B	Q3E754	87 aa	Known RBP	4.89	□□□□□ -1.63
TFA1	YKL028W	DAL7	P21826	554 aa		4.89	□□□□□ -1.63
TFA1	YKL028W	NGG1	P32494	702 aa		4.89	□□□□□ -1.63
TFA1	YKL028W	NPL6	P32832	435 aa		4.89	□□□□□ -1.63
TFA1	YKL028W	AIM3	P38266	947 aa	Known RBP	4.89	□□□□□ -1.63
TFA1	YKL028W	CCZ1	P38273	704 aa		4.89	□□□□□ -1.63
TFA1	YKL028W	HSL7	P38274	827 aa		4.89	□□□□□ -1.63
TFA1	YKL028W	PPE1	P38796	400 aa		4.89	□□□□□ -1.63
TFA1	YKL028W	SAW1	P39735	261 aa		4.89	□□□□□ -1.63
TFA1	YKL028W	RIC1	P40395	1056 aa		4.89	□□□□□ -1.63
TFA1	YKL028W	IRC6	P43615	237 aa		4.89	□□□□□ -1.63
TFA1	YKL028W	HXT16	P47185	567 aa		4.89	□□□□□ -1.63
TFA1	YKL028W	GPI8	P49018	411 aa		4.89	□□□□□ -1.63
TFA1	YKL028W	UBC9	P50623	157 aa	Predicted RBP	4.89	□□□□□ -1.63
TFA1	YKL028W	YML6	P51998	286 aa		4.89	□□□□□ -1.63
TFA1	YKL028W	PCL10	P53124	433 aa		4.89	□□□□□ -1.63
TFA1	YKL028W	TIM50	Q02776	476 aa		4.89	□□□□□ -1.63
TFA1	YKL028W	NUR1	Q12066	484 aa		4.89	□□□□□ -1.63
TFA1	YKL028W	RRG1	Q12167	365 aa	Predicted RBP	4.89	□□□□□ -1.63
TFA1	YKL028W	YDL177C	Q12257	170 aa		4.89	□□□□□ -1.63
TFA1	YKL028W	SEM1	O94742	89 aa		4.88	□□□□□ -1.63
TFA1	YKL028W	MET8	P15807	274 aa		4.88	□□□□□ -1.63
TFA1	YKL028W	NFS1	P25374	497 aa		4.88	□□□□□ -1.63
TFA1	YKL028W	YKL100C	P34248	587 aa		4.88	□□□□□ -1.63
TFA1	YKL028W	YKL151C	P36059	337 aa		4.88	□□□□□ -1.63
TFA1	YKL028W	YKR078W	P36158	585 aa	Known RBP	4.88	□□□□□ -1.63
TFA1	YKL028W	FAT1	P38225	669 aa		4.88	□□□□□ -1.63
TFA1	YKL028W	SPC72	P39723	622 aa		4.88	□□□□□ -1.63
TFA1	YKL028W	MEP1	P40260	492 aa		4.88	□□□□□ -1.63
TFA1	YKL028W	DPH1	P40487	425 aa	Known RBP	4.88	□□□□□ -1.63
TFA1	YKL028W	VHR1	P40522	640 aa		4.88	□□□□□ -1.63
TFA1	YKL028W	ALY2	P47029	1046 aa		4.88	□□□□□ -1.63
TFA1	YKL028W	PUS4	P48567	403 aa	Known RBP	4.88	□□□□□ -1.63
TFA1	YKL028W	CTF4	Q01454	927 aa		4.88	□□□□□ -1.63
TFA1	YKL028W	PRP3	Q03338	469 aa	Predicted RBP	4.88	□□□□□ -1.63
TFA1	YKL028W	HRQ1	Q05549	1077 aa		4.88	□□□□□ -1.63
TFA1	YKL028W	OMS1	Q06668	471 aa		4.88	□□□□□ -1.63
TFA1	YKL028W	VHS3	Q08438	674 aa		4.88	□□□□□ -1.63
TFA1	YKL028W	TAH18	Q12181	623 aa		4.88	□□□□□ -1.63
TFA1	YKL028W	MTF2	P10849	440 aa		4.87	□□□□□ -1.63
TFA1	YKL028W	ATP12	P22135	325 aa		4.87	□□□□□ -1.63
TFA1	YKL028W	PHO3	P24031	467 aa		4.87	□□□□□ -1.63
TFA1	YKL028W	TSL1	P38427	1098 aa	Known RBP	4.87	□□□□□ -1.63
TFA1	YKL028W	SRP72	P38688	640 aa	Known RBP	4.87	□□□□□ -1.63
TFA1	YKL028W	PTC7	P38797	343 aa		4.87	□□□□□ -1.63
TFA1	YKL028W	LRP1	P38801	184 aa	Known RBP	4.87	□□□□□ -1.63
TFA1	YKL028W	AXL2	P38928	823 aa		4.87	□□□□□ -1.63
TFA1	YKL028W	YAR028W	P39548	234 aa		4.87	□□□□□ -1.63
TFA1	YKL028W	YEL068C	P39977	110 aa		4.87	□□□□□ -1.63
TFA1	YKL028W	MXR1	P40029	184 aa		4.87	□□□□□ -1.63
TFA1	YKL028W	YIL092W	P40497	633 aa		4.87	□□□□□ -1.63
TFA1	YKL028W	BTN2	P53286	410 aa		4.87	□□□□□ -1.63
TFA1	YKL028W	ELA1	P53861	379 aa	Predicted RBP	4.87	□□□□□ -1.63
TFA1	YKL028W	SYF1	Q04048	859 aa	Predicted RBP	4.87	□□□□□ -1.63
TFA1	YKL028W	LAP2	Q10740	671 aa		4.87	□□□□□ -1.63
TFA1	YKL028W	NAT1	P12945	854 aa	Known RBP	4.86	□□□□□ -1.63
TFA1	YKL028W	YCL049C	P25577	312 aa		4.86	□□□□□ -1.63
TFA1	YKL028W	SEC65	P29478	273 aa		4.86	□□□□□ -1.63
TFA1	YKL028W	RPT3	P33298	428 aa	Known RBP	4.86	□□□□□ -1.63
TFA1	YKL028W	SDS22	P36047	338 aa		4.86	□□□□□ -1.63
TFA1	YKL028W	APM3	P38153	483 aa		4.86	□□□□□ -1.63
TFA1	YKL028W	RXT2	P38255	430 aa		4.86	□□□□□ -1.63
TFA1	YKL028W	GYP7	P48365	746 aa		4.86	□□□□□ -1.63
TFA1	YKL028W	ATP22	P50273	684 aa	Predicted RBP	4.86	□□□□□ -1.63
TFA1	YKL028W	TIM10	P87108	93 aa		4.86	□□□□□ -1.63
TFA1	YKL028W	MRPL13	Q02204	264 aa		4.86	□□□□□ -1.63
TFA1	YKL028W	VID22	Q05934	901 aa		4.86	□□□□□ -1.63
TFA1	YKL028W	SMC6	Q12749	1114 aa		4.86	□□□□□ -1.63
TFA1	YKL028W	TY1B-A	O13527	1196 aa	Known RBP	4.85	□□□□□ -1.63
TFA1	YKL028W	SNF1	P06782	633 aa	Known RBP	4.85	□□□□□ -1.63
TFA1	YKL028W	AAD3	P25612	363 aa		4.85	□□□□□ -1.63
TFA1	YKL028W	SLA2	P33338	968 aa		4.85	□□□□□ -1.63
TFA1	YKL028W	LAM1	P38851	1228 aa		4.85	□□□□□ -1.63
TFA1	YKL028W	TPA1	P40032	644 aa	Known RBP	4.85	□□□□□ -1.63
TFA1	YKL028W	RLP7	P40693	322 aa	Known RBP	4.85	□□□□□ -1.63
TFA1	YKL028W	YGR045C	P53229	120 aa		4.85	□□□□□ -1.63
TFA1	YKL028W	MRPL22	P53881	309 aa		4.85	□□□□□ -1.63
TFA1	YKL028W	ACM1	Q08981	209 aa		4.85	□□□□□ -1.63
TFA1	YKL028W	LEU2	P04173	364 aa	Predicted RBP	4.84	□□□□□ -1.63
TFA1	YKL028W	NUC1	P08466	329 aa		4.84	□□□□□ -1.63
TFA1	YKL028W	CDC16	P09798	840 aa		4.84	□□□□□ -1.63
TFA1	YKL028W	GUK1	P15454	187 aa	Known RBP	4.84	□□□□□ -1.63
TFA1	YKL028W	NCP1	P16603	691 aa	Known RBP	4.84	□□□□□ -1.63
TFA1	YKL028W	RPC53	P25441	422 aa		4.84	□□□□□ -1.63
TFA1	YKL028W	CDC48	P25694	835 aa	Known RBP	4.84	□□□□□ -1.63
TFA1	YKL028W	QNS1	P38795	714 aa	Known RBP	4.84	□□□□□ -1.63
TFA1	YKL028W	JEM1	P40358	645 aa		4.84	□□□□□ -1.63
TFA1	YKL028W	AXL1	P40851	1208 aa		4.84	□□□□□ -1.63
TFA1	YKL028W	GTS1	P40956	396 aa		4.84	□□□□□ -1.63
TFA1	YKL028W	MAD3	P47074	515 aa		4.84	□□□□□ -1.63
TFA1	YKL028W	YKE2	P52553	114 aa		4.84	□□□□□ -1.63
TFA1	YKL028W	RIM8	P53179	542 aa		4.84	□□□□□ -1.63
TFA1	YKL028W	YDR286C	Q05530	114 aa		4.84	□□□□□ -1.63
TFA1	YKL028W	UTP21	Q06078	939 aa	Predicted RBP	4.84	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 18 ms