RNA–Protein interactions for RNA: YJL081C

ARP4, Transcript of Nuclear actin-related protein involved in chromatin remodeling, yeast

Gene ARP4, Length 1,470 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ARP4	YJL081C	SIC1	P38634	284 aa		4.09	□□□□□ -1.75
ARP4	YJL081C	SET5	P38890	526 aa	Known RBP	4.09	□□□□□ -1.75
ARP4	YJL081C	ALG2	P43636	503 aa		4.09	□□□□□ -1.75
ARP4	YJL081C	IOC4	Q04213	475 aa		4.09	□□□□□ -1.75
ARP4	YJL081C	YDL144C	Q07589	356 aa		4.09	□□□□□ -1.75
ARP4	YJL081C	MRH1	Q12117	320 aa	Predicted RBP	4.09	□□□□□ -1.75
ARP4	YJL081C	LAT1	P12695	482 aa	Known RBP	4.08	□□□□□ -1.76
ARP4	YJL081C	YIR042C	P40586	236 aa		4.08	□□□□□ -1.76
ARP4	YJL081C	RIA1	P53893	1110 aa		4.08	□□□□□ -1.76
ARP4	YJL081C	IRC13	Q08630	104 aa		4.08	□□□□□ -1.76
ARP4	YJL081C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
ARP4	YJL081C	GPR1	Q12361	961 aa		4.08	□□□□□ -1.76
ARP4	YJL081C	YBR182C-A	Q8TGU6	64 aa		4.08	□□□□□ -1.76
ARP4	YJL081C	RAD9	P14737	1309 aa		4.08	□□□□□ -1.76
ARP4	YJL081C	YML133C	Q03099	1374 aa		4.07	□□□□□ -1.76
ARP4	YJL081C	YLL067C	Q07888	1374 aa		4.07	□□□□□ -1.76
ARP4	YJL081C	YLL066C	Q99208	1374 aa		4.07	□□□□□ -1.76
ARP4	YJL081C	CUE2	P36075	443 aa	Known RBP	4.07	□□□□□ -1.76
ARP4	YJL081C	PCL5	P38794	229 aa		4.07	□□□□□ -1.76
ARP4	YJL081C	CHZ1	P40019	153 aa	Predicted RBP	4.07	□□□□□ -1.76
ARP4	YJL081C	YFR016C	P43597	1233 aa	Known RBP	4.07	□□□□□ -1.76
ARP4	YJL081C	YDR514C	Q04408	483 aa		4.07	□□□□□ -1.76
ARP4	YJL081C	MET7	Q08645	548 aa		4.07	□□□□□ -1.76
ARP4	YJL081C	MPP10	P47083	593 aa	Known RBP	4.06	□□□□□ -1.76
ARP4	YJL081C	HSV2	P50079	448 aa	Predicted RBP	4.06	□□□□□ -1.76
ARP4	YJL081C	RTA1	P53047	317 aa		4.06	□□□□□ -1.76
ARP4	YJL081C	HUL5	P53119	910 aa		4.06	□□□□□ -1.76
ARP4	YJL081C	ATP25	Q03153	612 aa		4.06	□□□□□ -1.76
ARP4	YJL081C	TGL5	Q12043	749 aa		4.06	□□□□□ -1.76
ARP4	YJL081C	TRM3	Q07527	1436 aa		4.06	□□□□□ -1.76
ARP4	YJL081C	BCK1	Q01389	1478 aa		4.06	□□□□□ -1.76
ARP4	YJL081C	CAN1	P04817	590 aa		4.05	□□□□□ -1.76
ARP4	YJL081C	SPC29	P33419	253 aa		4.05	□□□□□ -1.76
ARP4	YJL081C	RSP5	P39940	809 aa	Known RBP	4.05	□□□□□ -1.76
ARP4	YJL081C	RLP7	P40693	322 aa	Known RBP	4.05	□□□□□ -1.76
ARP4	YJL081C	SHR5	P41912	237 aa		4.05	□□□□□ -1.76
ARP4	YJL081C	RRP46	P53256	223 aa	Predicted RBP	4.05	□□□□□ -1.76
ARP4	YJL081C	LGE1	Q02796	332 aa	Known RBP	4.05	□□□□□ -1.76
ARP4	YJL081C	SGO1	Q08490	590 aa		4.05	□□□□□ -1.76
ARP4	YJL081C	ATG11	Q12527	1178 aa		4.05	□□□□□ -1.76
ARP4	YJL081C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
ARP4	YJL081C	CLC1	P17891	233 aa		4.05	□□□□□ -1.76
ARP4	YJL081C	BCD1	P38772	366 aa		4.05	□□□□□ -1.76
ARP4	YJL081C	FMP52	P40008	231 aa		4.05	□□□□□ -1.76
ARP4	YJL081C	YIR014W	P40570	242 aa		4.05	□□□□□ -1.76
ARP4	YJL081C	HXT16	P47185	567 aa		4.05	□□□□□ -1.76
ARP4	YJL081C	MTR3	P48240	250 aa	Predicted RBP	4.05	□□□□□ -1.76
ARP4	YJL081C	ZDS1	P50111	915 aa	Known RBP	4.05	□□□□□ -1.76
ARP4	YJL081C	ZIP2	P53061	704 aa		4.05	□□□□□ -1.76
ARP4	YJL081C	YRB30	P53107	440 aa	Predicted RBP	4.05	□□□□□ -1.76
ARP4	YJL081C	ASM4	Q05166	528 aa		4.05	□□□□□ -1.76
ARP4	YJL081C	BDF2	Q07442	638 aa		4.05	□□□□□ -1.76
ARP4	YJL081C	DIF1	O13577	133 aa		4.04	□□□□□ -1.76
ARP4	YJL081C	GFA1	P14742	717 aa	Known RBP	4.04	□□□□□ -1.76
ARP4	YJL081C	GAL11	P19659	1081 aa		4.04	□□□□□ -1.76
ARP4	YJL081C	YBR259W	P38338	688 aa		4.04	□□□□□ -1.76
ARP4	YJL081C	FPR3	P38911	411 aa	Known RBP	4.04	□□□□□ -1.76
ARP4	YJL081C	HOS4	P40480	1083 aa		4.04	□□□□□ -1.76
ARP4	YJL081C	SUT2	Q12286	268 aa		4.04	□□□□□ -1.76
ARP4	YJL081C	HIS7	P33734	552 aa	Known RBP	4.03	□□□□□ -1.76
ARP4	YJL081C	TDP1	P38319	544 aa		4.03	□□□□□ -1.76
ARP4	YJL081C	TY4A-J	P47023	414 aa		4.03	□□□□□ -1.76
ARP4	YJL081C	UBC11	P52492	156 aa		4.03	□□□□□ -1.76
ARP4	YJL081C	TEL2	P53038	688 aa		4.03	□□□□□ -1.76
ARP4	YJL081C	VPS73	P53142	486 aa	Known RBP	4.03	□□□□□ -1.76
ARP4	YJL081C	CDC43	P18898	376 aa		4.02	□□□□□ -1.77
ARP4	YJL081C	ECM1	P39715	212 aa		4.02	□□□□□ -1.77
ARP4	YJL081C	BAP3	P41815	604 aa		4.02	□□□□□ -1.77
ARP4	YJL081C	TEX1	P53851	422 aa	Known RBP	4.02	□□□□□ -1.77
ARP4	YJL081C	SSL2	Q00578	843 aa		4.02	□□□□□ -1.77
ARP4	YJL081C	NDJ1	Q12366	352 aa		4.02	□□□□□ -1.77
ARP4	YJL081C	HCA4	P20448	770 aa	Known RBP	4.01	□□□□□ -1.77
ARP4	YJL081C	KIN3	P22209	435 aa		4.01	□□□□□ -1.77
ARP4	YJL081C	PER1	P25625	357 aa		4.01	□□□□□ -1.77
ARP4	YJL081C	TAH11	P47112	604 aa		4.01	□□□□□ -1.77
ARP4	YJL081C	YDR338C	Q05497	695 aa		4.01	□□□□□ -1.77
ARP4	YJL081C	THI22	Q06490	572 aa		4.01	□□□□□ -1.77
ARP4	YJL081C	SNF2	P22082	1703 aa		4.01	□□□□□ -1.77
ARP4	YJL081C	HIR1	P32479	840 aa		4	□□□□□ -1.77
ARP4	YJL081C	CBR1	P38626	284 aa	Known RBP	4	□□□□□ -1.77
ARP4	YJL081C	RTR1	P40084	226 aa	Predicted RBP	4	□□□□□ -1.77
ARP4	YJL081C	YIL092W	P40497	633 aa		4	□□□□□ -1.77
ARP4	YJL081C	ALY2	P47029	1046 aa		4	□□□□□ -1.77
ARP4	YJL081C	YBP2	P53169	641 aa		4	□□□□□ -1.77
ARP4	YJL081C	HEF3	P53978	1044 aa	Known RBP	4	□□□□□ -1.77
ARP4	YJL081C	SMX3	P54999	86 aa	Predicted RBP	4	□□□□□ -1.77
ARP4	YJL081C	GAD1	Q04792	585 aa		4	□□□□□ -1.77
ARP4	YJL081C	CDC53	Q12018	815 aa	Known RBP	4	□□□□□ -1.77
ARP4	YJL081C	KRE5	P22023	1365 aa		4	□□□□□ -1.77
ARP4	YJL081C	MLP1	Q02455	1875 aa	Known RBP	4	□□□□□ -1.77
ARP4	YJL081C	DAL5	P15365	543 aa		3.99	□□□□□ -1.77
ARP4	YJL081C	PRD1	P25375	712 aa		3.99	□□□□□ -1.77
ARP4	YJL081C	PEX2	P32800	271 aa		3.99	□□□□□ -1.77
ARP4	YJL081C	PPZ2	P33329	710 aa		3.99	□□□□□ -1.77
ARP4	YJL081C	YAP1802	P53309	568 aa		3.99	□□□□□ -1.77
ARP4	YJL081C	EAF7	P53911	425 aa	Known RBP	3.99	□□□□□ -1.77
ARP4	YJL081C	NSE3	Q05541	303 aa		3.99	□□□□□ -1.77
ARP4	YJL081C	HIM1	Q06674	414 aa		3.99	□□□□□ -1.77
ARP4	YJL081C	HAP1	P0CE41	1502 aa		3.99	□□□□□ -1.77
ARP4	YJL081C	REV7	P38927	245 aa		3.98	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms