RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPB4	YFL002C	MMM1	P41800	426 aa		4.62	□□□□□ -1.67
SPB4	YFL002C	BNA1	P47096	177 aa		4.62	□□□□□ -1.67
SPB4	YFL002C	ENP2	P48234	707 aa	Known RBP	4.62	□□□□□ -1.67
SPB4	YFL002C	MSC2	Q03455	724 aa		4.62	□□□□□ -1.67
SPB4	YFL002C	YMR210W	Q03649	449 aa		4.62	□□□□□ -1.67
SPB4	YFL002C	SPC19	Q03954	165 aa		4.62	□□□□□ -1.67
SPB4	YFL002C	EIS1	Q05050	843 aa	Known RBP	4.62	□□□□□ -1.67
SPB4	YFL002C	GAS5	Q08193	484 aa		4.62	□□□□□ -1.67
SPB4	YFL002C	SDH5	Q08230	162 aa		4.62	□□□□□ -1.67
SPB4	YFL002C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
SPB4	YFL002C	YCL049C	P25577	312 aa		4.62	□□□□□ -1.67
SPB4	YFL002C	APL1	P27351	700 aa		4.62	□□□□□ -1.67
SPB4	YFL002C	SEG2	P34250	1132 aa		4.62	□□□□□ -1.67
SPB4	YFL002C	TAF5	P38129	798 aa		4.62	□□□□□ -1.67
SPB4	YFL002C	LAM1	P38851	1228 aa		4.62	□□□□□ -1.67
SPB4	YFL002C	SWD1	P39706	426 aa		4.62	□□□□□ -1.67
SPB4	YFL002C	YGR012W	P53206	393 aa		4.62	□□□□□ -1.67
SPB4	YFL002C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
SPB4	YFL002C	MRPL13	Q02204	264 aa		4.62	□□□□□ -1.67
SPB4	YFL002C	CDA1	Q06702	301 aa		4.62	□□□□□ -1.67
SPB4	YFL002C	VAS1	P07806	1104 aa	Known RBP	4.61	□□□□□ -1.67
SPB4	YFL002C	MTF2	P10849	440 aa		4.61	□□□□□ -1.67
SPB4	YFL002C	KIN2	P13186	1147 aa	Known RBP	4.61	□□□□□ -1.67
SPB4	YFL002C	BLI1	P35727	113 aa		4.61	□□□□□ -1.67
SPB4	YFL002C	ABZ1	P37254	787 aa	Predicted RBP	4.61	□□□□□ -1.67
SPB4	YFL002C	CIT3	P43635	486 aa		4.61	□□□□□ -1.67
SPB4	YFL002C	SET2	P46995	733 aa	Known RBP	4.61	□□□□□ -1.67
SPB4	YFL002C	SSY5	P47002	699 aa		4.61	□□□□□ -1.67
SPB4	YFL002C	BUD9	P53226	547 aa		4.61	□□□□□ -1.67
SPB4	YFL002C	SIZ1	Q04195	904 aa		4.61	□□□□□ -1.67
SPB4	YFL002C	SGD1	Q06132	899 aa		4.61	□□□□□ -1.67
SPB4	YFL002C	IMH1	Q06704	911 aa	Known RBP	4.61	□□□□□ -1.67
SPB4	YFL002C	SPS1	P08458	490 aa		4.6	□□□□□ -1.67
SPB4	YFL002C	NCP1	P16603	691 aa	Known RBP	4.6	□□□□□ -1.67
SPB4	YFL002C	MCM3	P24279	971 aa	Known RBP	4.6	□□□□□ -1.67
SPB4	YFL002C	AIM26	P32858	118 aa		4.6	□□□□□ -1.67
SPB4	YFL002C	SLC1	P33333	303 aa		4.6	□□□□□ -1.67
SPB4	YFL002C	WHI3	P34761	661 aa	Known RBP	4.6	□□□□□ -1.67
SPB4	YFL002C	PEX7	P39108	375 aa		4.6	□□□□□ -1.67
SPB4	YFL002C	NOP16	P40007	231 aa	Known RBP	4.6	□□□□□ -1.67
SPB4	YFL002C	PUG1	P40100	303 aa		4.6	□□□□□ -1.67
SPB4	YFL002C	CPR6	P53691	371 aa	Known RBP	4.6	□□□□□ -1.67
SPB4	YFL002C	ORC4	P54791	529 aa		4.6	□□□□□ -1.67
SPB4	YFL002C	YPS7	Q06325	596 aa		4.6	□□□□□ -1.67
SPB4	YFL002C	MCH5	Q08777	521 aa		4.6	□□□□□ -1.67
SPB4	YFL002C	RIB2	Q12362	591 aa	Known RBP	4.6	□□□□□ -1.67
SPB4	YFL002C	AI1	P03875	834 aa		4.6	□□□□□ -1.67
SPB4	YFL002C	AI3	P03877	415 aa		4.6	□□□□□ -1.67
SPB4	YFL002C	NUC1	P08466	329 aa		4.6	□□□□□ -1.67
SPB4	YFL002C	CMP2	P14747	604 aa		4.6	□□□□□ -1.67
SPB4	YFL002C	CBP3	P21560	335 aa		4.6	□□□□□ -1.67
SPB4	YFL002C	SAN1	P22470	610 aa		4.6	□□□□□ -1.67
SPB4	YFL002C	IMG2	P25642	146 aa	Predicted RBP	4.6	□□□□□ -1.67
SPB4	YFL002C	APN2	P38207	520 aa		4.6	□□□□□ -1.67
SPB4	YFL002C	DUN1	P39009	513 aa		4.6	□□□□□ -1.67
SPB4	YFL002C	MAD2	P40958	196 aa		4.6	□□□□□ -1.67
SPB4	YFL002C	RCM1	P53972	490 aa		4.6	□□□□□ -1.67
SPB4	YFL002C	BRE4	Q07660	1125 aa		4.6	□□□□□ -1.67
SPB4	YFL002C	RTK1	Q12100	620 aa	Predicted RBP	4.6	□□□□□ -1.67
SPB4	YFL002C	ENT1	Q12518	454 aa		4.6	□□□□□ -1.67
SPB4	YFL002C	PHO5	P00635	467 aa		4.59	□□□□□ -1.67
SPB4	YFL002C	SNF1	P06782	633 aa	Known RBP	4.59	□□□□□ -1.67
SPB4	YFL002C	UBC1	P21734	215 aa	Known RBP	4.59	□□□□□ -1.67
SPB4	YFL002C	ADP1	P25371	1049 aa		4.59	□□□□□ -1.67
SPB4	YFL002C	MUD2	P36084	527 aa	Known RBP	4.59	□□□□□ -1.67
SPB4	YFL002C	CTF8	P38877	133 aa		4.59	□□□□□ -1.67
SPB4	YFL002C	STT3	P39007	718 aa	Known RBP	4.59	□□□□□ -1.67
SPB4	YFL002C	ZRG8	P40021	1076 aa		4.59	□□□□□ -1.67
SPB4	YFL002C	IMA5	P40884	581 aa		4.59	□□□□□ -1.67
SPB4	YFL002C	OYE3	P41816	400 aa	Predicted RBP	4.59	□□□□□ -1.67
SPB4	YFL002C	MTR3	P48240	250 aa	Predicted RBP	4.59	□□□□□ -1.67
SPB4	YFL002C	UPF3	P48412	387 aa	Known RBP	4.59	□□□□□ -1.67
SPB4	YFL002C	EXG2	P52911	562 aa		4.59	□□□□□ -1.67
SPB4	YFL002C	RSM24	Q03976	319 aa		4.59	□□□□□ -1.67
SPB4	YFL002C	STP4	Q07351	490 aa		4.59	□□□□□ -1.67
SPB4	YFL002C	TRE1	Q08919	783 aa		4.59	□□□□□ -1.67
SPB4	YFL002C	DIN7	Q12086	430 aa		4.59	□□□□□ -1.67
SPB4	YFL002C	GPR1	Q12361	961 aa		4.59	□□□□□ -1.67
SPB4	YFL002C	SNU66	Q12420	587 aa	Predicted RBP	4.59	□□□□□ -1.67
SPB4	YFL002C	LEU2	P04173	364 aa	Predicted RBP	4.58	□□□□□ -1.68
SPB4	YFL002C	YHR078W	P38799	552 aa		4.58	□□□□□ -1.68
SPB4	YFL002C	VTC2	P43585	828 aa		4.58	□□□□□ -1.68
SPB4	YFL002C	PSP2	P50109	593 aa	Known RBP	4.58	□□□□□ -1.68
SPB4	YFL002C	VID22	Q05934	901 aa		4.58	□□□□□ -1.68
SPB4	YFL002C	MIS1	P09440	975 aa	Known RBP	4.58	□□□□□ -1.68
SPB4	YFL002C	MRP7	P12687	371 aa		4.58	□□□□□ -1.68
SPB4	YFL002C	PAH1	P32567	862 aa		4.58	□□□□□ -1.68
SPB4	YFL002C	RPT3	P33298	428 aa	Known RBP	4.58	□□□□□ -1.68
SPB4	YFL002C	ATG19	P35193	415 aa		4.58	□□□□□ -1.68
SPB4	YFL002C	YLF2	P38746	405 aa		4.58	□□□□□ -1.68
SPB4	YFL002C	AXL2	P38928	823 aa		4.58	□□□□□ -1.68
SPB4	YFL002C	SAK1	P38990	1142 aa		4.58	□□□□□ -1.68
SPB4	YFL002C	GID8	P40208	455 aa		4.58	□□□□□ -1.68
SPB4	YFL002C	SDP1	P40479	209 aa		4.58	□□□□□ -1.68
SPB4	YFL002C	DPH1	P40487	425 aa	Known RBP	4.58	□□□□□ -1.68
SPB4	YFL002C	SGM1	P47166	707 aa		4.58	□□□□□ -1.68
SPB4	YFL002C	MNT2	P53059	558 aa		4.58	□□□□□ -1.68
SPB4	YFL002C	ARI1	P53111	347 aa	Known RBP	4.58	□□□□□ -1.68
SPB4	YFL002C	TRI1	Q05024	226 aa		4.58	□□□□□ -1.68
SPB4	YFL002C	TFC6	Q06339	672 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms