RNA–Protein interactions for RNA: YER146W

LSM5, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM5, Length 282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM5YER146W SPO21Q12411 609 aa9.42□□□□□ -0.9
LSM5YER146W YBL111CQ3E7Y5 667 aa9.42□□□□□ -0.9
LSM5YER146W POT1P27796 417 aaKnown RBP RIP-Chip data9.41□□□□□ -0.9not detected
LSM5YER146W CAP1P28495 268 aaKnown RBP9.41□□□□□ -0.9
LSM5YER146W RRT2P38332 387 aa9.41□□□□□ -0.9
LSM5YER146W PRP31P49704 494 aaPredicted RBP9.41□□□□□ -0.9
LSM5YER146W HOP2P53187 214 aa9.41□□□□□ -0.9
LSM5YER146W FMP30Q02883 468 aa9.41□□□□□ -0.9
LSM5YER146W MTG1Q03151 367 aaPredicted RBP9.41□□□□□ -0.9
LSM5YER146W YMR187CQ03236 431 aa9.41□□□□□ -0.9
LSM5YER146W SNU56Q03782 492 aaKnown RBP9.41□□□□□ -0.9
LSM5YER146W SXM1Q04175 944 aaKnown RBP9.41□□□□□ -0.9
LSM5YER146W CDD1Q06549 142 aa9.41□□□□□ -0.9
LSM5YER146W ATG23Q06671 453 aa9.41□□□□□ -0.9
LSM5YER146W DNL4Q08387 944 aaPredicted RBP9.41□□□□□ -0.9
LSM5YER146W YDR524C-BQ3E6R4 66 aa9.41□□□□□ -0.9
LSM5YER146W PDR1P12383 1068 aa9.4□□□□□ -0.9
LSM5YER146W SFL1P20134 766 aa9.4□□□□□ -0.9
LSM5YER146W RSA4P25382 515 aaKnown RBP9.4□□□□□ -0.9
LSM5YER146W SPT5P27692 1063 aaKnown RBP9.4□□□□□ -0.9
LSM5YER146W DBF4P32325 704 aa9.4□□□□□ -0.9
LSM5YER146W ABD1P32783 436 aaPredicted RBP9.4□□□□□ -0.9
LSM5YER146W RRN6P32786 894 aa9.4□□□□□ -0.9
LSM5YER146W DRE2P36152 348 aa9.4□□□□□ -0.9
LSM5YER146W NOP4P37838 685 aaKnown RBP9.4□□□□□ -0.9
LSM5YER146W DSE1P40077 573 aa9.4□□□□□ -0.9
LSM5YER146W INP51P40559 946 aaKnown RBP9.4□□□□□ -0.9
LSM5YER146W BRO1P48582 844 aa9.4□□□□□ -0.9
LSM5YER146W MND1P53102 219 aa9.4□□□□□ -0.9
LSM5YER146W YGL036WP53185 909 aaPredicted RBP9.4□□□□□ -0.9
LSM5YER146W RRB1Q04225 511 aaKnown RBP9.4□□□□□ -0.9
LSM5YER146W YDR278CQ05612 105 aa9.4□□□□□ -0.9
LSM5YER146W YOR022CQ12204 715 aa9.4□□□□□ -0.9
LSM5YER146W BRL1P38770 471 aa9.39□□□□□ -0.91
LSM5YER146W SNZ3P43545 298 aa9.39□□□□□ -0.91
LSM5YER146W RPC17P47076 161 aa9.39□□□□□ -0.91
LSM5YER146W YJR054WP47114 497 aa9.39□□□□□ -0.91
LSM5YER146W SNZ2P53824 298 aa9.39□□□□□ -0.91
LSM5YER146W YPL034WQ03083 165 aa9.39□□□□□ -0.91
LSM5YER146W CWC21Q03375 135 aaKnown RBP9.39□□□□□ -0.91
LSM5YER146W TDA9Q04545 1251 aa9.39□□□□□ -0.91
LSM5YER146W UTP13Q05946 817 aaKnown RBP9.39□□□□□ -0.91
LSM5YER146W CIR2Q08822 631 aa9.39□□□□□ -0.91
LSM5YER146W RIO1Q12196 484 aaKnown RBP9.39□□□□□ -0.91
LSM5YER146W TPK1P06244 397 aa9.38□□□□□ -0.91
LSM5YER146W VBA3P25594 458 aa9.38□□□□□ -0.91
LSM5YER146W DEP1P31385 405 aa9.38□□□□□ -0.91
LSM5YER146W NFU1P32860 256 aa9.38□□□□□ -0.91
LSM5YER146W YBL055CP34220 418 aaPredicted RBP9.38□□□□□ -0.91
LSM5YER146W VBA5P36172 582 aa9.38□□□□□ -0.91
LSM5YER146W AGP2P38090 596 aa9.38□□□□□ -0.91
LSM5YER146W END3P39013 349 aa9.38□□□□□ -0.91
LSM5YER146W POL31P46957 487 aa9.38□□□□□ -0.91
LSM5YER146W ALT2P52892 507 aa9.38□□□□□ -0.91
LSM5YER146W RIM8P53179 542 aa9.38□□□□□ -0.91
LSM5YER146W RPL22BP56628 122 aaKnown RBP9.38□□□□□ -0.91
LSM5YER146W GPD1Q00055 391 aaKnown RBP9.38□□□□□ -0.91
LSM5YER146W MZM1Q03429 123 aaPredicted RBP9.38□□□□□ -0.91
LSM5YER146W URH1Q04179 340 aa9.38□□□□□ -0.91
LSM5YER146W YLR455WQ06188 304 aa9.38□□□□□ -0.91
LSM5YER146W TRE1Q08919 783 aa9.38□□□□□ -0.91
LSM5YER146W ZRT2Q12436 422 aa9.38□□□□□ -0.91
LSM5YER146W CDC8P00572 216 aa9.37□□□□□ -0.91
LSM5YER146W PUT4P15380 627 aa9.37□□□□□ -0.91
LSM5YER146W CLB1P24868 471 aa9.37□□□□□ -0.91
LSM5YER146W SAT4P25333 603 aaKnown RBP9.37□□□□□ -0.91
LSM5YER146W EFB1P32471 206 aaKnown RBP9.37□□□□□ -0.91
LSM5YER146W SLX1P38324 304 aa9.37□□□□□ -0.91
LSM5YER146W TMN3P40071 706 aa9.37□□□□□ -0.91
LSM5YER146W ESL1P40456 1118 aa9.37□□□□□ -0.91
LSM5YER146W RNT1Q02555 471 aa9.37□□□□□ -0.91
LSM5YER146W TIF35Q04067 274 aaKnown RBP9.37□□□□□ -0.91
LSM5YER146W AIM41Q12032 185 aa9.37□□□□□ -0.91
LSM5YER146W RNA1P11745 407 aaKnown RBP9.36□□□□□ -0.91
LSM5YER146W MRPL32P25348 183 aa9.36□□□□□ -0.91
LSM5YER146W MUD2P36084 527 aaKnown RBP9.36□□□□□ -0.91
LSM5YER146W QNS1P38795 714 aaKnown RBP9.36□□□□□ -0.91
LSM5YER146W SAK1P38990 1142 aa9.36□□□□□ -0.91
LSM5YER146W RRD1P40454 393 aaKnown RBP9.36□□□□□ -0.91
LSM5YER146W SPO74P45819 413 aa9.36□□□□□ -0.91
LSM5YER146W STP1Q00947 519 aa9.36□□□□□ -0.91
LSM5YER146W MRS2Q01926 470 aa9.36□□□□□ -0.91
LSM5YER146W DIS3Q08162 1001 aaKnown RBP9.36□□□□□ -0.91
LSM5YER146W JIP3O13555 125 aa9.35□□□□□ -0.91
LSM5YER146W TUB3P09734 445 aaKnown RBP9.35□□□□□ -0.91
LSM5YER146W PMS1P14242 873 aa9.35□□□□□ -0.91
LSM5YER146W FRE1P32791 686 aa9.35□□□□□ -0.91
LSM5YER146W ABZ1P37254 787 aaPredicted RBP9.35□□□□□ -0.91
LSM5YER146W GRS1P38088 690 aaKnown RBP9.35□□□□□ -0.91
LSM5YER146W YBL036CP38197 257 aa9.35□□□□□ -0.91
LSM5YER146W PCM1P38628 557 aaKnown RBP9.35□□□□□ -0.91
LSM5YER146W GEM1P39722 662 aa9.35□□□□□ -0.91
LSM5YER146W YFL040WP43562 540 aa9.35□□□□□ -0.91
LSM5YER146W STB4P50104 949 aa9.35□□□□□ -0.91
LSM5YER146W SLG1P54867 378 aa9.35□□□□□ -0.91
LSM5YER146W UFO1Q04511 668 aa9.35□□□□□ -0.91
LSM5YER146W MAG2Q06436 670 aaKnown RBP9.35□□□□□ -0.91
LSM5YER146W VPS54Q12071 889 aa9.35□□□□□ -0.91
LSM5YER146W PEP5P12868 1029 aa9.34□□□□□ -0.91
LSM5YER146W VPS3P23643 1011 aa9.34□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 58.8 ms