RNA–Protein interactions for RNA: YER112W

LSM4, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM4, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM4	YER112W	YEN1	P40028	759 aa		4.66	□□□□□ -1.66
LSM4	YER112W	YIR042C	P40586	236 aa		4.66	□□□□□ -1.66
LSM4	YER112W	ARG5,6	Q01217	863 aa		4.66	□□□□□ -1.66
LSM4	YER112W	REC102	Q02721	264 aa		4.66	□□□□□ -1.66
LSM4	YER112W	TGL5	Q12043	749 aa		4.66	□□□□□ -1.66
LSM4	YER112W	LAT1	P12695	482 aa	Known RBP	4.65	□□□□□ -1.67
LSM4	YER112W	ADE2	P21264	571 aa	Known RBP	4.65	□□□□□ -1.67
LSM4	YER112W	TRZ1	P36159	838 aa	Predicted RBP	4.65	□□□□□ -1.67
LSM4	YER112W	PPS1	P38148	807 aa		4.65	□□□□□ -1.67
LSM4	YER112W	SET2	P46995	733 aa	Known RBP	4.65	□□□□□ -1.67
LSM4	YER112W	MRPS35	P53292	345 aa		4.65	□□□□□ -1.67
LSM4	YER112W	ARP4	P80428	489 aa		4.65	□□□□□ -1.67
LSM4	YER112W	DCS2	Q12123	353 aa		4.65	□□□□□ -1.67
LSM4	YER112W	MUP1	P50276	574 aa		4.64	□□□□□ -1.67
LSM4	YER112W	GPG1	P53130	126 aa		4.64	□□□□□ -1.67
LSM4	YER112W	CTK1	Q03957	528 aa	Known RBP	4.64	□□□□□ -1.67
LSM4	YER112W	ADY4	Q05955	493 aa		4.64	□□□□□ -1.67
LSM4	YER112W	MRH1	Q12117	320 aa	Predicted RBP	4.64	□□□□□ -1.67
LSM4	YER112W	SSB1	P11484	613 aa	Known RBP	4.63	□□□□□ -1.67
LSM4	YER112W	OAF1	P39720	1047 aa	Predicted RBP	4.63	□□□□□ -1.67
LSM4	YER112W	SSB2	P40150	613 aa	Known RBP	4.63	□□□□□ -1.67
LSM4	YER112W	GID8	P40208	455 aa		4.63	□□□□□ -1.67
LSM4	YER112W	CCT5	P40413	562 aa	Known RBP	4.63	□□□□□ -1.67
LSM4	YER112W	GPP1	P41277	250 aa	Known RBP	4.63	□□□□□ -1.67
LSM4	YER112W	MNN11	P46985	422 aa	Known RBP	4.63	□□□□□ -1.67
LSM4	YER112W	BRE5	P53741	515 aa	Known RBP	4.63	□□□□□ -1.67
LSM4	YER112W	TEX1	P53851	422 aa	Known RBP	4.63	□□□□□ -1.67
LSM4	YER112W	PYC1	P11154	1178 aa	Known RBP	4.62	□□□□□ -1.67
LSM4	YER112W	DID4	P36108	232 aa		4.62	□□□□□ -1.67
LSM4	YER112W	YBR053C	P38235	358 aa		4.62	□□□□□ -1.67
LSM4	YER112W	YHR112C	P38716	378 aa		4.62	□□□□□ -1.67
LSM4	YER112W	PTA1	Q01329	785 aa	Predicted RBP	4.62	□□□□□ -1.67
LSM4	YER112W	GFA1	P14742	717 aa	Known RBP	4.61	□□□□□ -1.67
LSM4	YER112W	AKL1	P38080	1108 aa	Known RBP	4.61	□□□□□ -1.67
LSM4	YER112W	YHR202W	P38887	602 aa		4.61	□□□□□ -1.67
LSM4	YER112W	BEM4	P39011	633 aa		4.61	□□□□□ -1.67
LSM4	YER112W	CCT3	P39077	534 aa	Known RBP	4.61	□□□□□ -1.67
LSM4	YER112W	COX18	P53239	316 aa		4.61	□□□□□ -1.67
LSM4	YER112W	YMR210W	Q03649	449 aa		4.61	□□□□□ -1.67
LSM4	YER112W	HMO1	Q03973	246 aa	Known RBP	4.61	□□□□□ -1.67
LSM4	YER112W	SGO1	Q08490	590 aa		4.61	□□□□□ -1.67
LSM4	YER112W	TRE2	Q08693	809 aa		4.61	□□□□□ -1.67
LSM4	YER112W	MRC1	P25588	1096 aa		4.6	□□□□□ -1.67
LSM4	YER112W	PAF1	P38351	445 aa		4.6	□□□□□ -1.67
LSM4	YER112W	NUG1	P40010	520 aa	Known RBP	4.6	□□□□□ -1.67
LSM4	YER112W	BAP3	P41815	604 aa		4.6	□□□□□ -1.67
LSM4	YER112W	YJL163C	P46996	555 aa		4.6	□□□□□ -1.67
LSM4	YER112W	ECM9	Q02202	377 aa		4.6	□□□□□ -1.67
LSM4	YER112W	YHM2	Q04013	314 aa		4.6	□□□□□ -1.67
LSM4	YER112W	COQ11	Q05892	277 aa		4.6	□□□□□ -1.67
LSM4	YER112W	DIA2	Q08496	732 aa	Predicted RBP	4.6	□□□□□ -1.67
LSM4	YER112W	APM4	Q99186	491 aa		4.6	□□□□□ -1.67
LSM4	YER112W	ERG20	P08524	352 aa	Known RBP	4.59	□□□□□ -1.67
LSM4	YER112W	SWI6	P09959	803 aa		4.59	□□□□□ -1.67
LSM4	YER112W	RNR1	P21524	888 aa	Known RBP	4.59	□□□□□ -1.67
LSM4	YER112W	ILV6	P25605	309 aa	Known RBP	4.59	□□□□□ -1.67
LSM4	YER112W	REV7	P38927	245 aa		4.59	□□□□□ -1.67
LSM4	YER112W	DUG1	P43616	481 aa	Known RBP	4.59	□□□□□ -1.67
LSM4	YER112W	LEE1	Q02799	301 aa	Known RBP	4.59	□□□□□ -1.67
LSM4	YER112W	ISA1	Q07821	250 aa	Predicted RBP	4.59	□□□□□ -1.67
LSM4	YER112W	SUT2	Q12286	268 aa		4.59	□□□□□ -1.67
LSM4	YER112W	CLF1	Q12309	687 aa	Predicted RBP	4.59	□□□□□ -1.67
LSM4	YER112W	HCA4	P20448	770 aa	Known RBP	4.58	□□□□□ -1.68
LSM4	YER112W	IMG2	P25642	146 aa	Predicted RBP	4.58	□□□□□ -1.68
LSM4	YER112W	SEC65	P29478	273 aa		4.58	□□□□□ -1.68
LSM4	YER112W	PET127	P32606	800 aa		4.58	□□□□□ -1.68
LSM4	YER112W	PEX2	P32800	271 aa		4.58	□□□□□ -1.68
LSM4	YER112W	OAF3	P36023	863 aa		4.58	□□□□□ -1.68
LSM4	YER112W	TDP1	P38319	544 aa		4.58	□□□□□ -1.68
LSM4	YER112W	BCD1	P38772	366 aa		4.58	□□□□□ -1.68
LSM4	YER112W	HOS4	P40480	1083 aa		4.58	□□□□□ -1.68
LSM4	YER112W	VHS3	Q08438	674 aa		4.58	□□□□□ -1.68
LSM4	YER112W	HFI1	Q12060	488 aa		4.58	□□□□□ -1.68
LSM4	YER112W	TMA17	Q12513	150 aa		4.58	□□□□□ -1.68
LSM4	YER112W	RMP1	Q12530	201 aa		4.58	□□□□□ -1.68
LSM4	YER112W	HRP1	Q99383	534 aa	Known RBP	4.58	□□□□□ -1.68
LSM4	YER112W	TUB1	P09733	447 aa	Known RBP	4.57	□□□□□ -1.68
LSM4	YER112W	AEP2	P22136	580 aa		4.57	□□□□□ -1.68
LSM4	YER112W	EUG1	P32474	517 aa		4.57	□□□□□ -1.68
LSM4	YER112W	PPZ2	P33329	710 aa		4.57	□□□□□ -1.68
LSM4	YER112W	HIS7	P33734	552 aa	Known RBP	4.57	□□□□□ -1.68
LSM4	YER112W	HXT6	P39003	570 aa	Known RBP	4.57	□□□□□ -1.68
LSM4	YER112W	HXT7	P39004	570 aa		4.57	□□□□□ -1.68
LSM4	YER112W	NUP60	P39705	539 aa		4.57	□□□□□ -1.68
LSM4	YER112W	FMP52	P40008	231 aa		4.57	□□□□□ -1.68
LSM4	YER112W	UBC11	P52492	156 aa		4.57	□□□□□ -1.68
LSM4	YER112W	MTL1	P53214	551 aa		4.57	□□□□□ -1.68
LSM4	YER112W	IMO32	P53219	342 aa		4.57	□□□□□ -1.68
LSM4	YER112W	YAP1802	P53309	568 aa		4.57	□□□□□ -1.68
LSM4	YER112W	RIA1	P53893	1110 aa		4.57	□□□□□ -1.68
LSM4	YER112W	PPN1	Q04119	674 aa		4.57	□□□□□ -1.68
LSM4	YER112W	HOF1	Q05080	669 aa		4.57	□□□□□ -1.68
LSM4	YER112W	YLR407W	Q06070	228 aa		4.57	□□□□□ -1.68
LSM4	YER112W	IRC13	Q08630	104 aa		4.57	□□□□□ -1.68
LSM4	YER112W	YNL162W-A	Q3E7A8	72 aa		4.57	□□□□□ -1.68
LSM4	YER112W	BNR1	P40450	1375 aa		4.56	□□□□□ -1.68
LSM4	YER112W	CDC43	P18898	376 aa		4.56	□□□□□ -1.68
LSM4	YER112W	SEC15	P22224	910 aa		4.56	□□□□□ -1.68
LSM4	YER112W	PEX1	P24004	1043 aa		4.56	□□□□□ -1.68
LSM4	YER112W	PRP22	P24384	1145 aa	Known RBP	4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms