RNA–Protein interactions for RNA: YDR485C

VPS72, Transcript of Htz1p-binding component of the SWR1 complex, yeastyeast

Gene VPS72, Length 2,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS72YDR485C RRF1P38771 230 aa6.42□□□□□ -1.38
VPS72YDR485C GIC1P38785 314 aa6.42□□□□□ -1.38
VPS72YDR485C STT3P39007 718 aaKnown RBP6.42□□□□□ -1.38
VPS72YDR485C STL1P39932 569 aa6.42□□□□□ -1.38
VPS72YDR485C JEM1P40358 645 aa6.42□□□□□ -1.38
VPS72YDR485C VID28P40547 921 aa6.42□□□□□ -1.38
VPS72YDR485C GCV1P48015 400 aa6.42□□□□□ -1.38
VPS72YDR485C MSB3P48566 633 aaPredicted RBP6.42□□□□□ -1.38
VPS72YDR485C MDM38Q08179 573 aa6.42□□□□□ -1.38
VPS72YDR485C YOR059CQ08448 450 aaKnown RBP6.42□□□□□ -1.38
VPS72YDR485C YLR149CQ99296 730 aa6.42□□□□□ -1.38
VPS72YDR485C PDX1P16451 410 aa6.42□□□□□ -1.38
VPS72YDR485C CDC48P25694 835 aaKnown RBP6.42□□□□□ -1.38
VPS72YDR485C TGL1P34163 548 aa6.42□□□□□ -1.38
VPS72YDR485C YKR018CP36114 725 aa6.42□□□□□ -1.38
VPS72YDR485C LYS14P40971 790 aa6.42□□□□□ -1.38
VPS72YDR485C UBP15P50101 1230 aa6.42□□□□□ -1.38
VPS72YDR485C SFB2P53953 876 aa6.42□□□□□ -1.38
VPS72YDR485C YMR155WQ03795 547 aa6.42□□□□□ -1.38
VPS72YDR485C YLR345WQ06137 509 aa6.42□□□□□ -1.38
VPS72YDR485C LAP2Q10740 671 aa6.42□□□□□ -1.38
VPS72YDR485C FUM1P08417 488 aaKnown RBP6.41□□□□□ -1.38
VPS72YDR485C UGA3P26370 528 aa6.41□□□□□ -1.38
VPS72YDR485C YGR045CP53229 120 aa6.41□□□□□ -1.38
VPS72YDR485C RSA3Q05942 220 aaKnown RBP6.41□□□□□ -1.38
VPS72YDR485C MET17P06106 444 aa6.4□□□□□ -1.38
VPS72YDR485C ATG14P38270 344 aa6.4□□□□□ -1.38
VPS72YDR485C SSZ1P38788 538 aaKnown RBP6.4□□□□□ -1.38
VPS72YDR485C YER158CP40095 573 aa6.4□□□□□ -1.38
VPS72YDR485C MAD2P40958 196 aa6.4□□□□□ -1.38
VPS72YDR485C YJR098CP47139 656 aa6.4□□□□□ -1.38
VPS72YDR485C GUP1P53154 560 aa6.4□□□□□ -1.38
VPS72YDR485C SNO4Q04902 237 aa6.4□□□□□ -1.38
VPS72YDR485C RPN7Q06103 429 aaKnown RBP6.4□□□□□ -1.38
VPS72YDR485C ISA1Q07821 250 aaPredicted RBP6.4□□□□□ -1.38
VPS72YDR485C HSP33Q08914 237 aaKnown RBP6.4□□□□□ -1.38
VPS72YDR485C HSP32Q08992 237 aa6.4□□□□□ -1.38
VPS72YDR485C CKA1P15790 372 aa6.4□□□□□ -1.39
VPS72YDR485C SRP68P38687 599 aaKnown RBP6.4□□□□□ -1.39
VPS72YDR485C FKH1P40466 484 aa6.4□□□□□ -1.39
VPS72YDR485C NOP15P53927 220 aaPredicted RBP6.4□□□□□ -1.39
VPS72YDR485C YLL058WQ12198 575 aa6.4□□□□□ -1.39
VPS72YDR485C SGF29P25554 259 aa6.39□□□□□ -1.39
VPS72YDR485C YIL166CP40445 542 aa6.39□□□□□ -1.39
VPS72YDR485C PRK1P40494 810 aa6.39□□□□□ -1.39
VPS72YDR485C SAE2P46946 345 aa6.39□□□□□ -1.39
VPS72YDR485C LEE1Q02799 301 aaKnown RBP6.39□□□□□ -1.39
VPS72YDR485C PSF3Q12146 194 aa6.39□□□□□ -1.39
VPS72YDR485C HSF1P10961 833 aa6.39□□□□□ -1.39
VPS72YDR485C BCK2P33306 851 aa6.39□□□□□ -1.39
VPS72YDR485C YJR039WP47107 1121 aa6.39□□□□□ -1.39
VPS72YDR485C PRP43P53131 767 aaKnown RBP6.39□□□□□ -1.39
VPS72YDR485C BRE5P53741 515 aaKnown RBP6.39□□□□□ -1.39
VPS72YDR485C SRT1Q03175 343 aa6.39□□□□□ -1.39
VPS72YDR485C DIN7Q12086 430 aa6.39□□□□□ -1.39
VPS72YDR485C DBP10Q12389 995 aaKnown RBP6.39□□□□□ -1.39
VPS72YDR485C ACE2P21192 770 aa6.38□□□□□ -1.39
VPS72YDR485C CBP3P21560 335 aa6.38□□□□□ -1.39
VPS72YDR485C MF(ALPHA)2P32435 120 aa6.38□□□□□ -1.39
VPS72YDR485C PPE1P38796 400 aa6.38□□□□□ -1.39
VPS72YDR485C POP2P39008 433 aa6.38□□□□□ -1.39
VPS72YDR485C BEM4P39011 633 aa6.38□□□□□ -1.39
VPS72YDR485C ZDS2P54786 942 aa6.38□□□□□ -1.39
VPS72YDR485C VAS1P07806 1104 aaKnown RBP6.38□□□□□ -1.39
VPS72YDR485C ROX1P25042 368 aa6.38□□□□□ -1.39
VPS72YDR485C SDS22P36047 338 aa6.38□□□□□ -1.39
VPS72YDR485C HOT1Q03213 719 aa6.38□□□□□ -1.39
VPS72YDR485C CRR1Q05790 422 aa6.38□□□□□ -1.39
VPS72YDR485C ADY3Q07732 790 aa6.38□□□□□ -1.39
VPS72YDR485C INO80P53115 1489 aa6.38□□□□□ -1.39
VPS72YDR485C PHO5P00635 467 aa6.37□□□□□ -1.39
VPS72YDR485C CLB4P24871 460 aa6.37□□□□□ -1.39
VPS72YDR485C PSF2P40359 213 aa6.37□□□□□ -1.39
VPS72YDR485C NOG2P53742 486 aaKnown RBP6.37□□□□□ -1.39
VPS72YDR485C HDA1P53973 706 aa6.37□□□□□ -1.39
VPS72YDR485C YLR407WQ06070 228 aa6.37□□□□□ -1.39
VPS72YDR485C DIF1O13577 133 aa6.37□□□□□ -1.39
VPS72YDR485C CPA2P03965 1118 aaKnown RBP6.37□□□□□ -1.39
VPS72YDR485C YEL076C-AP0CX16 216 aa6.37□□□□□ -1.39
VPS72YDR485C YLR464WP0CX17 216 aa6.37□□□□□ -1.39
VPS72YDR485C ACO1P19414 778 aaKnown RBP RIP-Chip data6.37□□□□□ -1.39not detected
VPS72YDR485C SWI4P25302 1093 aaKnown RBP6.37□□□□□ -1.39
VPS72YDR485C YEL076CP39971 216 aa6.37□□□□□ -1.39
VPS72YDR485C SIP4P46954 829 aa6.37□□□□□ -1.39
VPS72YDR485C TIM50Q02776 476 aa6.37□□□□□ -1.39
VPS72YDR485C YCG1Q06680 1035 aa6.37□□□□□ -1.39
VPS72YDR485C CSR1Q06705 408 aaKnown RBP6.37□□□□□ -1.39
VPS72YDR485C CDC45Q08032 650 aa6.37□□□□□ -1.39
VPS72YDR485C CUE5Q08412 411 aaKnown RBP6.37□□□□□ -1.39
VPS72YDR485C ARG3P05150 338 aa6.36□□□□□ -1.39
VPS72YDR485C POL3P15436 1097 aa6.36□□□□□ -1.39
VPS72YDR485C RPT3P33298 428 aaKnown RBP6.36□□□□□ -1.39
VPS72YDR485C EAR1Q03212 550 aa6.36□□□□□ -1.39
VPS72YDR485C THI21Q08975 551 aa6.36□□□□□ -1.39
VPS72YDR485C SMF3Q12078 473 aaPredicted RBP6.36□□□□□ -1.39
VPS72YDR485C RPL19AP0CX82 189 aaKnown RBP6.36□□□□□ -1.39
VPS72YDR485C RPL19BP0CX83 189 aaPredicted RBP6.36□□□□□ -1.39
VPS72YDR485C BET2P20133 325 aa6.36□□□□□ -1.39
VPS72YDR485C RPN3P40016 523 aaKnown RBP6.36□□□□□ -1.39
VPS72YDR485C CIR2Q08822 631 aa6.36□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 48.6 ms