RNA–Protein interactions for RNA: YDR407C

TRS120, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TRS120, Length 3,870 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS120YDR407C PMS1P14242 873 aa3.8□□□□□ -1.8
TRS120YDR407C RPL8AP17076 256 aaKnown RBP3.8□□□□□ -1.8
TRS120YDR407C EXO5P38289 585 aa3.8□□□□□ -1.8
TRS120YDR407C HIS2P38635 335 aa3.8□□□□□ -1.8
TRS120YDR407C RSM26P47141 266 aa3.8□□□□□ -1.8
TRS120YDR407C ASN1P49089 572 aaKnown RBP3.8□□□□□ -1.8
TRS120YDR407C TAF6P53040 516 aa3.8□□□□□ -1.8
TRS120YDR407C ATG1P53104 897 aa3.8□□□□□ -1.8
TRS120YDR407C UTP14Q04500 899 aaKnown RBP3.8□□□□□ -1.8
TRS120YDR407C GGA1Q06336 557 aa3.8□□□□□ -1.8
TRS120YDR407C SLD7Q08457 257 aa3.8□□□□□ -1.8
TRS120YDR407C YDR018CQ12185 396 aa3.8□□□□□ -1.8
TRS120YDR407C NAT1P12945 854 aaKnown RBP3.8□□□□□ -1.8
TRS120YDR407C SEC14P24280 304 aaKnown RBP3.8□□□□□ -1.8
TRS120YDR407C SPS22P25380 463 aa3.8□□□□□ -1.8
TRS120YDR407C VHC1P38329 1120 aa3.8□□□□□ -1.8
TRS120YDR407C ULP2P40537 1034 aaPredicted RBP3.8□□□□□ -1.8
TRS120YDR407C BUD32P53323 261 aa3.8□□□□□ -1.8
TRS120YDR407C SDH5Q08230 162 aa3.8□□□□□ -1.8
TRS120YDR407C CUE5Q08412 411 aaKnown RBP3.8□□□□□ -1.8
TRS120YDR407C RUD3Q12234 484 aaKnown RBP3.8□□□□□ -1.8
TRS120YDR407C ILV1P00927 576 aaKnown RBP3.8□□□□□ -1.8
TRS120YDR407C YPK1P12688 680 aaKnown RBP3.8□□□□□ -1.8
TRS120YDR407C PSE1P32337 1089 aaKnown RBP3.8□□□□□ -1.8
TRS120YDR407C RPT1P33299 467 aaKnown RBP3.8□□□□□ -1.8
TRS120YDR407C PSY2P40164 858 aa3.8□□□□□ -1.8
TRS120YDR407C TFG1P41895 735 aaPredicted RBP3.8□□□□□ -1.8
TRS120YDR407C MSH6Q03834 1242 aa3.8□□□□□ -1.8
TRS120YDR407C ACM1Q08981 209 aa3.8□□□□□ -1.8
TRS120YDR407C SLX4Q12098 748 aa3.8□□□□□ -1.8
TRS120YDR407C PCD1Q12524 340 aa3.8□□□□□ -1.8
TRS120YDR407C YPT6Q99260 215 aa3.8□□□□□ -1.8
TRS120YDR407C SCP160P06105 1222 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
TRS120YDR407C PYC2P32327 1180 aaKnown RBP3.79□□□□□ -1.8
TRS120YDR407C SAH1P39954 449 aaKnown RBP3.79□□□□□ -1.8
TRS120YDR407C INA22P40576 216 aa3.79□□□□□ -1.8
TRS120YDR407C SBE2P42223 864 aaKnown RBP3.79□□□□□ -1.8
TRS120YDR407C TAH11P47112 604 aa3.79□□□□□ -1.8
TRS120YDR407C EAF6P47128 113 aa3.79□□□□□ -1.8
TRS120YDR407C LSB1P53281 241 aa3.79□□□□□ -1.8
TRS120YDR407C GND2P53319 492 aa3.79□□□□□ -1.8
TRS120YDR407C TPK1P06244 397 aa3.79□□□□□ -1.8
TRS120YDR407C KAR3P17119 729 aa3.79□□□□□ -1.8
TRS120YDR407C AEP2P22136 580 aa3.79□□□□□ -1.8
TRS120YDR407C GSY1P23337 708 aa3.79□□□□□ -1.8
TRS120YDR407C RRT12P25381 491 aa3.79□□□□□ -1.8
TRS120YDR407C MUD1P32605 298 aaKnown RBP3.79□□□□□ -1.8
TRS120YDR407C FRE1P32791 686 aa3.79□□□□□ -1.8
TRS120YDR407C AST1P35183 429 aa3.79□□□□□ -1.8
TRS120YDR407C TMN3P40071 706 aa3.79□□□□□ -1.8
TRS120YDR407C YMR134WP40207 237 aa3.79□□□□□ -1.8
TRS120YDR407C YIL001WP40560 513 aa3.79□□□□□ -1.8
TRS120YDR407C PRY3P47033 881 aa3.79□□□□□ -1.8
TRS120YDR407C ILM1P47155 203 aa3.79□□□□□ -1.8
TRS120YDR407C SGM1P47166 707 aa3.79□□□□□ -1.8
TRS120YDR407C RNY1Q02933 434 aaKnown RBP3.79□□□□□ -1.8
TRS120YDR407C FMP42Q04991 504 aa3.79□□□□□ -1.8
TRS120YDR407C THI7Q05998 598 aa3.79□□□□□ -1.8
TRS120YDR407C TYW1Q08960 810 aaKnown RBP3.79□□□□□ -1.8
TRS120YDR407C MDM20Q12387 796 aaKnown RBP3.79□□□□□ -1.8
TRS120YDR407C SEY1Q99287 776 aa3.79□□□□□ -1.8
TRS120YDR407C TY1B-AO13527 1196 aaKnown RBP3.79□□□□□ -1.8
TRS120YDR407C ATP6P00854 259 aa3.79□□□□□ -1.8
TRS120YDR407C AMD2P22580 549 aa3.79□□□□□ -1.8
TRS120YDR407C MRF1P30775 413 aaPredicted RBP3.79□□□□□ -1.8
TRS120YDR407C GDT1P38301 280 aaPredicted RBP3.79□□□□□ -1.8
TRS120YDR407C LIA1P47120 325 aaKnown RBP3.79□□□□□ -1.8
TRS120YDR407C TAN1P53072 289 aaPredicted RBP3.79□□□□□ -1.8
TRS120YDR407C MNP1P53163 194 aaPredicted RBP3.79□□□□□ -1.8
TRS120YDR407C YGL039WP53183 348 aaKnown RBP3.79□□□□□ -1.8
TRS120YDR407C UTP6Q02354 440 aaKnown RBP3.79□□□□□ -1.8
TRS120YDR407C STE20Q03497 939 aaKnown RBP3.79□□□□□ -1.8
TRS120YDR407C APL5Q08951 932 aaKnown RBP3.79□□□□□ -1.8
TRS120YDR407C YMR085WP0CF18 432 aa3.78□□□□□ -1.8
TRS120YDR407C STE6P12866 1290 aa3.78□□□□□ -1.8
TRS120YDR407C GCY1P14065 312 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
TRS120YDR407C PHO91P27514 894 aa3.78□□□□□ -1.8
TRS120YDR407C SRL3P36167 246 aa3.78□□□□□ -1.8
TRS120YDR407C ALA1P40825 983 aaKnown RBP3.78□□□□□ -1.8
TRS120YDR407C SNZ3P43545 298 aa3.78□□□□□ -1.8
TRS120YDR407C SHE10P53075 577 aa3.78□□□□□ -1.8
TRS120YDR407C SNZ2P53824 298 aa3.78□□□□□ -1.8
TRS120YDR407C OCA6Q12454 224 aa3.78□□□□□ -1.8
TRS120YDR407C TIF1P10081 395 aaKnown RBP3.78□□□□□ -1.8
TRS120YDR407C ACE2P21192 770 aa3.78□□□□□ -1.8
TRS120YDR407C TYE7P33122 291 aaPredicted RBP3.78□□□□□ -1.8
TRS120YDR407C COY1P34237 679 aa3.78□□□□□ -1.8
TRS120YDR407C UBP14P38237 781 aaKnown RBP3.78□□□□□ -1.8
TRS120YDR407C ERC1P38767 581 aa3.78□□□□□ -1.8
TRS120YDR407C OAF1P39720 1047 aaPredicted RBP3.78□□□□□ -1.8
TRS120YDR407C SAP1P39955 897 aaKnown RBP3.78□□□□□ -1.8
TRS120YDR407C FTR1P40088 404 aa3.78□□□□□ -1.8
TRS120YDR407C HUL5P53119 910 aa3.78□□□□□ -1.8
TRS120YDR407C YNL146WP53906 100 aa3.78□□□□□ -1.8
TRS120YDR407C YML037CQ03703 340 aa3.78□□□□□ -1.8
TRS120YDR407C CDA1Q06702 301 aa3.78□□□□□ -1.8
TRS120YDR407C PMA1P05030 918 aaKnown RBP3.78□□□□□ -1.8
TRS120YDR407C DED1P06634 604 aaKnown RBP3.78□□□□□ -1.8
TRS120YDR407C ILS1P09436 1072 aaKnown RBP3.78□□□□□ -1.8
TRS120YDR407C RNA1P11745 407 aaKnown RBP3.78□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 30 ms